RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 HYIQ5T013 277 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 DTHD1Q6ZMT9 781 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 C15orf39Q6ZRI6 1047 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 OTOP3Q7RTS5 596 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 UBALD2Q8IYN6 164 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 HACE1Q8IYU2 909 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 ITFG1Q8TB96 612 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 GOLGA1Q92805 767 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 DDX27Q96GQ7 796 aaKnown RBP8.85□□□□□ -0.99
HDAC6-234ENST00000493923 SNX27Q96L92 541 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 IFT74Q96LB3 600 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 PRKD2Q9BZL6 878 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 KCNH6Q9H252 994 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 IKZF4Q9H2S9 585 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 BLOC1S4Q9NUP1 217 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.85□□□□□ -0.99
HDAC6-234ENST00000493923 DNM3Q9UQ16 869 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.85□□□□□ -0.99
HDAC6-234ENST00000493923 SF3B1O75533 1304 aaKnown RBP eCLIP8.84□□□□□ -0.99
HDAC6-234ENST00000493923 PES1O00541 588 aaKnown RBP8.84□□□□□ -0.99
HDAC6-234ENST00000493923 MAP2K7O14733 419 aa8.84□□□□□ -0.99
HDAC6-234ENST00000493923 NR1I2O75469 434 aa8.84□□□□□ -0.99
HDAC6-234ENST00000493923 PLA2G4BP0C869 781 aa8.84□□□□□ -0.99
HDAC6-234ENST00000493923 MAPTP10636 758 aaKnown RBP8.84□□□□□ -0.99
HDAC6-234ENST00000493923 OR1D2P34982 312 aa8.84□□□□□ -0.99
HDAC6-234ENST00000493923 GRM5P41594 1212 aa8.84□□□□□ -0.99
HDAC6-234ENST00000493923 GUCY2FP51841 1108 aa8.84□□□□□ -0.99
HDAC6-234ENST00000493923 EFNA5P52803 228 aa8.84□□□□□ -0.99
HDAC6-234ENST00000493923 SPAG1Q07617 926 aa8.84□□□□□ -0.99
HDAC6-234ENST00000493923 TDGQ13569 410 aa8.84□□□□□ -0.99
HDAC6-234ENST00000493923 PPP2R5AQ15172 486 aa8.84□□□□□ -0.99
HDAC6-234ENST00000493923 UPP1Q16831 310 aa8.84□□□□□ -0.99
HDAC6-234ENST00000493923 ZNF568Q3ZCX4 644 aa8.84□□□□□ -0.99
HDAC6-234ENST00000493923 KRT79Q5XKE5 535 aa8.84□□□□□ -0.99
HDAC6-234ENST00000493923 USP49Q70CQ1 688 aa8.84□□□□□ -0.99
HDAC6-234ENST00000493923 GET4Q7L5D6 327 aaPredicted RBP8.84□□□□□ -0.99
HDAC6-234ENST00000493923 GRASPQ7Z6J2 395 aaPredicted RBP8.84□□□□□ -0.99
HDAC6-234ENST00000493923 SLC44A3Q8N4M1 653 aa8.84□□□□□ -0.99
HDAC6-234ENST00000493923 TMEM161BQ8NDZ6 487 aa8.84□□□□□ -0.99
HDAC6-234ENST00000493923 PPP1R13BQ96KQ4 1090 aa8.84□□□□□ -0.99
HDAC6-234ENST00000493923 ADPGKQ9BRR6 497 aa8.84□□□□□ -0.99
HDAC6-234ENST00000493923 TMEM134Q9H6X4 195 aa8.84□□□□□ -0.99
HDAC6-234ENST00000493923 GDPD2Q9HCC8 539 aa8.84□□□□□ -0.99
HDAC6-234ENST00000493923 KMT5AQ9NQR1 393 aa8.84□□□□□ -0.99
HDAC6-234ENST00000493923 EPS15L1Q9UBC2 864 aa8.84□□□□□ -0.99
HDAC6-234ENST00000493923 DUSP12Q9UNI6 340 aa8.84□□□□□ -0.99
HDAC6-234ENST00000493923 FRYLO94915 3013 aa8.84□□□□□ -0.99
HDAC6-234ENST00000493923 SCN1AP35498 2009 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 BECN2A8MW95 431 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 TISP43B9A030 160 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 TMEM189-UBE2V1I3L0A0 370 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 PPEF2O14830 753 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 B3GAT3O94766 335 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 SEC24AO95486 1093 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 C8AP07357 584 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 CFHP08603 1231 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 LAMP2P13473 410 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 MCM3P25205 808 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 TNFSF9P41273 254 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 PTPN5P54829 565 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 HTR4Q13639 388 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 CRYMQ14894 314 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 SLC10A6Q3KNW5 377 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 FAM173BQ6P4H8 233 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 SLC39A4Q6P5W5 647 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 DCLRE1AQ6PJP8 1040 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 PARM1Q6UWI2 310 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 LUZP1Q86V48 1076 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 CCDC50Q8IVM0 306 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 GPR65Q8IYL9 337 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 SIX5Q8N196 739 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 SYT2Q8N9I0 419 aaPredicted RBP8.83□□□□□ -1
HDAC6-234ENST00000493923 FLCNQ8NFG4 579 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 SLC7A14Q8TBB6 771 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 HDAC7Q8WUI4 952 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 FGF14Q92915 247 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 ITFG2Q969R8 447 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 ACSF2Q96CM8 615 aaPredicted RBP8.83□□□□□ -1
HDAC6-234ENST00000493923 FIZ1Q96SL8 496 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 PAIP2Q9BPZ3 127 aaKnown RBP8.83□□□□□ -1
HDAC6-234ENST00000493923 MRPL4Q9BYD3 311 aaKnown RBP8.83□□□□□ -1
HDAC6-234ENST00000493923 RHOBTB2Q9BYZ6 727 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 PLEKHA4Q9H4M7 779 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.83□□□□□ -1
HDAC6-234ENST00000493923 ZDHHC7Q9NXF8 308 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 DNMT3BQ9UBC3 853 aaKnown RBP8.83□□□□□ -1
HDAC6-234ENST00000493923 MTRRQ9UBK8 725 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 STK39Q9UEW8 545 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 TUBGCP4Q9UGJ1 667 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 CA14Q9ULX7 337 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 SSX2IPQ9Y2D8 614 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 CDY1Q9Y6F8 540 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 OTOGLQ3ZCN5 2332 aa8.83□□□□□ -1
HDAC6-234ENST00000493923 CEP250Q9BV73 2442 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 ANHXE9PGG2 379 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 LAD1O00515 517 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 PODXLO00592 558 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 FAM189A1O60320 539 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 TBC1D4O60343 1298 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 LRRN2O75325 713 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms