RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 HBP1O60381 514 aa10.23□□□□□ -0.77
NPHP3-209ENST00000493732 FSBPO95073 299 aa10.23□□□□□ -0.77
NPHP3-209ENST00000493732 SHBGP04278 402 aa10.23□□□□□ -0.77
NPHP3-209ENST00000493732 TMOD1P28289 359 aa10.23□□□□□ -0.77
NPHP3-209ENST00000493732 NF2P35240 595 aa10.23□□□□□ -0.77
NPHP3-209ENST00000493732 SSR1P43307 286 aaKnown RBP10.23□□□□□ -0.77
NPHP3-209ENST00000493732 NFX1Q12986 1120 aaKnown RBP10.23□□□□□ -0.77
NPHP3-209ENST00000493732 SNX1Q13596 522 aa10.23□□□□□ -0.77
NPHP3-209ENST00000493732 KCTD2Q14681 263 aa10.23□□□□□ -0.77
NPHP3-209ENST00000493732 ZNF568Q3ZCX4 644 aa10.23□□□□□ -0.77
NPHP3-209ENST00000493732 DCUN1D2Q6PH85 259 aa10.23□□□□□ -0.77
NPHP3-209ENST00000493732 GADL1Q6ZQY3 521 aa10.23□□□□□ -0.77
NPHP3-209ENST00000493732 CCDC121Q6ZUS5 278 aa10.23□□□□□ -0.77
NPHP3-209ENST00000493732 POLNQ7Z5Q5 900 aa10.23□□□□□ -0.77
NPHP3-209ENST00000493732 CCDC25Q86WR0 208 aa10.23□□□□□ -0.77
NPHP3-209ENST00000493732 RIBC1Q8N443 379 aaPredicted RBP10.23□□□□□ -0.77
NPHP3-209ENST00000493732 TTC39CQ8N584 583 aa10.23□□□□□ -0.77
NPHP3-209ENST00000493732 NIPA2Q8N8Q9 360 aa10.23□□□□□ -0.77
NPHP3-209ENST00000493732 RNF149Q8NC42 400 aa10.23□□□□□ -0.77
NPHP3-209ENST00000493732 GPR20Q99678 358 aa10.23□□□□□ -0.77
NPHP3-209ENST00000493732 NFKBIZQ9BYH8 718 aa10.23□□□□□ -0.77
NPHP3-209ENST00000493732 LHX5Q9H2C1 402 aa10.23□□□□□ -0.77
NPHP3-209ENST00000493732 MROH8Q9H579 483 aa10.23□□□□□ -0.77
NPHP3-209ENST00000493732 PPCSQ9HAB8 311 aa10.23□□□□□ -0.77
NPHP3-209ENST00000493732 CHST7Q9NS84 486 aa10.23□□□□□ -0.77
NPHP3-209ENST00000493732 INTS9Q9NV88 658 aaKnown RBP10.23□□□□□ -0.77
NPHP3-209ENST00000493732 WDR35Q9P2L0 1181 aa10.23□□□□□ -0.77
NPHP3-209ENST00000493732 DRG1Q9Y295 367 aaKnown RBP10.23□□□□□ -0.77
NPHP3-209ENST00000493732 LCTP09848 1927 aa10.23□□□□□ -0.77
NPHP3-209ENST00000493732 ZNFX1Q9P2E3 1918 aaKnown RBP10.23□□□□□ -0.77
NPHP3-209ENST00000493732 GOLGA6L7A0A1B0GV03 622 aa10.22□□□□□ -0.77
NPHP3-209ENST00000493732 FAM189A1O60320 539 aa10.22□□□□□ -0.77
NPHP3-209ENST00000493732 HARSP12081 509 aaKnown RBP10.22□□□□□ -0.77
NPHP3-209ENST00000493732 OSBPP22059 807 aa10.22□□□□□ -0.77
NPHP3-209ENST00000493732 FGFR4P22455 802 aa10.22□□□□□ -0.77
NPHP3-209ENST00000493732 PROZP22891 400 aa10.22□□□□□ -0.77
NPHP3-209ENST00000493732 IVDP26440 423 aa10.22□□□□□ -0.77
NPHP3-209ENST00000493732 ITGA8P53708 1063 aa10.22□□□□□ -0.77
NPHP3-209ENST00000493732 HIRAP54198 1017 aaPredicted RBP10.22□□□□□ -0.77
NPHP3-209ENST00000493732 WNT7BP56706 349 aa10.22□□□□□ -0.77
NPHP3-209ENST00000493732 TNFAIP2Q03169 654 aa10.22□□□□□ -0.77
NPHP3-209ENST00000493732 NR1H3Q13133 447 aa10.22□□□□□ -0.77
NPHP3-209ENST00000493732 AUHQ13825 339 aaKnown RBP10.22□□□□□ -0.77
NPHP3-209ENST00000493732 STAT4Q14765 748 aa10.22□□□□□ -0.77
NPHP3-209ENST00000493732 ZNF699Q32M78 642 aa10.22□□□□□ -0.77
NPHP3-209ENST00000493732 C6orf89Q6UWU4 347 aa10.22□□□□□ -0.77
NPHP3-209ENST00000493732 FASTKD5Q7L8L6 764 aaKnown RBP10.22□□□□□ -0.77
NPHP3-209ENST00000493732 GSTA5Q7RTV2 222 aa10.22□□□□□ -0.77
NPHP3-209ENST00000493732 ERICH1Q86X53 443 aa10.22□□□□□ -0.77
NPHP3-209ENST00000493732 PASD1Q8IV76 773 aa10.22□□□□□ -0.77
NPHP3-209ENST00000493732 DHX37Q8IY37 1157 aaKnown RBP10.22□□□□□ -0.77
NPHP3-209ENST00000493732 ANKRD13AQ8IZ07 590 aa10.22□□□□□ -0.77
NPHP3-209ENST00000493732 MICALL1Q8N3F8 863 aa10.22□□□□□ -0.77
NPHP3-209ENST00000493732 GTF3C2Q8WUA4 911 aaPredicted RBP10.22□□□□□ -0.77
NPHP3-209ENST00000493732 TTC25Q96NG3 672 aa10.22□□□□□ -0.77
NPHP3-209ENST00000493732 SELENOSQ9BQE4 189 aa10.22□□□□□ -0.77
NPHP3-209ENST00000493732 CDC42EP4Q9H3Q1 356 aaKnown RBP10.22□□□□□ -0.77
NPHP3-209ENST00000493732 FZD8Q9H461 694 aa10.22□□□□□ -0.77
NPHP3-209ENST00000493732 RABEP2Q9H5N1 569 aa10.22□□□□□ -0.77
NPHP3-209ENST00000493732 CISHQ9NSE2 258 aa10.22□□□□□ -0.77
NPHP3-209ENST00000493732 FZD1Q9UP38 647 aa10.22□□□□□ -0.77
NPHP3-209ENST00000493732 AGTPBP1Q9UPW5 1226 aa10.22□□□□□ -0.77
NPHP3-209ENST00000493732 ASB14A6NK59 587 aa10.21□□□□□ -0.77
NPHP3-209ENST00000493732 ABHD2P08910 425 aa10.21□□□□□ -0.77
NPHP3-209ENST00000493732 SRGAP2CP0DJJ0 459 aa10.21□□□□□ -0.77
NPHP3-209ENST00000493732 P4HA1P13674 534 aa10.21□□□□□ -0.77
NPHP3-209ENST00000493732 CHN1P15882 459 aa10.21□□□□□ -0.77
NPHP3-209ENST00000493732 BRD2P25440 801 aaKnown RBP10.21□□□□□ -0.77
NPHP3-209ENST00000493732 LACTBP83111 547 aaPredicted RBP10.21□□□□□ -0.77
NPHP3-209ENST00000493732 PRKG1Q13976 671 aa10.21□□□□□ -0.77
NPHP3-209ENST00000493732 TMEM132AQ24JP5 1023 aa10.21□□□□□ -0.77
NPHP3-209ENST00000493732 ZBTB41Q5SVQ8 909 aa10.21□□□□□ -0.77
NPHP3-209ENST00000493732 ZFYVE27Q5T4F4 411 aa10.21□□□□□ -0.77
NPHP3-209ENST00000493732 ATF7IP2Q5U623 682 aa10.21□□□□□ -0.77
NPHP3-209ENST00000493732 ZBTB33Q86T24 672 aa10.21□□□□□ -0.77
NPHP3-209ENST00000493732 CPNE8Q86YQ8 564 aa10.21□□□□□ -0.77
NPHP3-209ENST00000493732 TTC13Q8NBP0 860 aa10.21□□□□□ -0.77
NPHP3-209ENST00000493732 FNIP1Q8TF40 1166 aa10.21□□□□□ -0.77
NPHP3-209ENST00000493732 SGIP1Q9BQI5 828 aa10.21□□□□□ -0.77
NPHP3-209ENST00000493732 TRIM7Q9C029 511 aa10.21□□□□□ -0.77
NPHP3-209ENST00000493732 MIS12Q9H081 205 aa10.21□□□□□ -0.77
NPHP3-209ENST00000493732 ASCC2Q9H1I8 757 aaPredicted RBP10.21□□□□□ -0.77
NPHP3-209ENST00000493732 PRMT7Q9NVM4 692 aaPredicted RBP10.21□□□□□ -0.77
NPHP3-209ENST00000493732 TNFSF13BQ9Y275 285 aa10.21□□□□□ -0.77
NPHP3-209ENST00000493732 USTQ9Y2C2 406 aa10.21□□□□□ -0.77
NPHP3-209ENST00000493732 NEU2Q9Y3R4 380 aa10.21□□□□□ -0.77
NPHP3-209ENST00000493732 ACTL7BQ9Y614 415 aa10.21□□□□□ -0.77
NPHP3-209ENST00000493732 DCDC2CA8MYV0 355 aa10.21□□□□□ -0.78
NPHP3-209ENST00000493732 H0YHG0 523 aa10.21□□□□□ -0.78
NPHP3-209ENST00000493732 SMAPO00193 183 aa10.21□□□□□ -0.78
NPHP3-209ENST00000493732 CDH16O75309 829 aa10.21□□□□□ -0.78
NPHP3-209ENST00000493732 CST3P01034 146 aaPredicted RBP10.21□□□□□ -0.78
NPHP3-209ENST00000493732 KRT7P08729 469 aa10.21□□□□□ -0.78
NPHP3-209ENST00000493732 ATICP31939 592 aa10.21□□□□□ -0.78
NPHP3-209ENST00000493732 PHKA2P46019 1235 aa10.21□□□□□ -0.78
NPHP3-209ENST00000493732 TAS2R40P59535 323 aa10.21□□□□□ -0.78
NPHP3-209ENST00000493732 MYL6P60660 151 aa10.21□□□□□ -0.78
NPHP3-209ENST00000493732 FSTL1Q12841 308 aa10.21□□□□□ -0.78
NPHP3-209ENST00000493732 TTLL4Q14679 1199 aa10.21□□□□□ -0.78
NPHP3-209ENST00000493732 ACAP1Q15027 740 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms