RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 ERLIN2O94905 339 aa11.47□□□□□ -0.57
PHACTR4-204ENST00000493669 CFHP08603 1231 aa11.47□□□□□ -0.57
PHACTR4-204ENST00000493669 PTGIRP43119 386 aa11.47□□□□□ -0.57
PHACTR4-204ENST00000493669 OSTNP61366 133 aa11.47□□□□□ -0.57
PHACTR4-204ENST00000493669 SIX1Q15475 284 aaPredicted RBP11.47□□□□□ -0.57
PHACTR4-204ENST00000493669 TRADDQ15628 312 aa11.47□□□□□ -0.57
PHACTR4-204ENST00000493669 MORN1Q5T089 497 aa11.47□□□□□ -0.57
PHACTR4-204ENST00000493669 MARCH8Q5T0T0 291 aa11.47□□□□□ -0.57
PHACTR4-204ENST00000493669 C1orf127Q8N9H9 656 aa11.47□□□□□ -0.57
PHACTR4-204ENST00000493669 NPLOC4Q8TAT6 608 aa11.47□□□□□ -0.57
PHACTR4-204ENST00000493669 ZNF668Q96K58 619 aaPredicted RBP11.47□□□□□ -0.57
PHACTR4-204ENST00000493669 SIX4Q9UIU6 781 aa11.47□□□□□ -0.57
PHACTR4-204ENST00000493669 STRIP2Q9ULQ0 834 aa11.47□□□□□ -0.57
PHACTR4-204ENST00000493669 A0A1B0GUA9 196 aa11.47□□□□□ -0.57
PHACTR4-204ENST00000493669 GOLGA6CA6NDK9 693 aa11.47□□□□□ -0.57
PHACTR4-204ENST00000493669 A6NJR5 290 aa11.47□□□□□ -0.57
PHACTR4-204ENST00000493669 TSPAN1O60635 241 aa11.47□□□□□ -0.57
PHACTR4-204ENST00000493669 VTNP04004 478 aa11.47□□□□□ -0.57
PHACTR4-204ENST00000493669 NFICP08651 508 aa11.47□□□□□ -0.57
PHACTR4-204ENST00000493669 GOLGA6DP0CG33 693 aa11.47□□□□□ -0.57
PHACTR4-204ENST00000493669 CD58P19256 250 aa11.47□□□□□ -0.57
PHACTR4-204ENST00000493669 COILP38432 576 aaPredicted RBP11.47□□□□□ -0.57
PHACTR4-204ENST00000493669 AADACL2Q6P093 401 aa11.47□□□□□ -0.57
PHACTR4-204ENST00000493669 CCDC137Q6PK04 289 aaKnown RBP11.47□□□□□ -0.57
PHACTR4-204ENST00000493669 KATNAL2Q8IYT4 538 aa11.47□□□□□ -0.57
PHACTR4-204ENST00000493669 FAM76AQ8TAV0 307 aa11.47□□□□□ -0.57
PHACTR4-204ENST00000493669 DDX27Q96GQ7 796 aaKnown RBP11.47□□□□□ -0.57
PHACTR4-204ENST00000493669 HOMER3Q9NSC5 361 aa11.47□□□□□ -0.57
PHACTR4-204ENST00000493669 GOLGA6AQ9NYA3 693 aa11.47□□□□□ -0.57
PHACTR4-204ENST00000493669 ITGA11Q9UKX5 1188 aa11.47□□□□□ -0.57
PHACTR4-204ENST00000493669 TLR3O15455 904 aaKnown RBP11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 MAP2K5Q13163 448 aa11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 JADE1Q6IE81 842 aa11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 SYDE1Q6ZW31 735 aaPredicted RBP11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 ADAT2Q7Z6V5 191 aaKnown RBP11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 KIAA0319LQ8IZA0 1049 aa11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 PIK3R5Q8WYR1 880 aa11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 DERAQ9Y315 318 aa11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 NRCAMQ92823 1304 aa11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 TCRBV5S1A1TA0A578 114 aa11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 F2P00734 622 aa11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 RARAP10276 462 aa11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 BRD2P25440 801 aaKnown RBP11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 POLR2BP30876 1174 aaKnown RBP11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 GRM5P41594 1212 aa11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 GSCP56915 257 aaPredicted RBP11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 LACTBP83111 547 aaPredicted RBP11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 TMEM132DQ14C87 1099 aa11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 LRRC38Q5VT99 294 aa11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 CDR2LQ86X02 465 aaPredicted RBP11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 DDX42Q86XP3 938 aaKnown RBP eCLIP11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 CPNE8Q86YQ8 564 aa11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 TMEM192Q8IY95 271 aa11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 CXorf38Q8TB03 319 aa11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 RIN2Q8WYP3 895 aaPredicted RBP11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 C18orf8Q96DM3 657 aa11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 SCLT1Q96NL6 688 aa11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 ACAP3Q96P50 834 aa11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 FMO2Q99518 471 aa11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 TRIM51Q9BSJ1 452 aa11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 NEUROG2Q9H2A3 272 aa11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 PLEKHA5Q9HAU0 1116 aa11.46□□□□□ -0.57
PHACTR4-204ENST00000493669 PASKQ96RG2 1323 aa11.46□□□□□ -0.58
PHACTR4-204ENST00000493669 TMEM191CA6NGB0 347 aa11.46□□□□□ -0.58
PHACTR4-204ENST00000493669 MANSC4A6NHS7 340 aaPredicted RBP11.46□□□□□ -0.58
PHACTR4-204ENST00000493669 A6NNZ2 444 aa11.46□□□□□ -0.58
PHACTR4-204ENST00000493669 KRT19P08727 400 aa11.46□□□□□ -0.58
PHACTR4-204ENST00000493669 WEE2P0C1S8 567 aa11.46□□□□□ -0.58
PHACTR4-204ENST00000493669 GYS2P54840 703 aa11.46□□□□□ -0.58
PHACTR4-204ENST00000493669 SLC10A6Q3KNW5 377 aa11.46□□□□□ -0.58
PHACTR4-204ENST00000493669 TUBB8Q3ZCM7 444 aa11.46□□□□□ -0.58
PHACTR4-204ENST00000493669 SCARA3Q6AZY7 606 aa11.46□□□□□ -0.58
PHACTR4-204ENST00000493669 DNAJC24Q6P3W2 148 aa11.46□□□□□ -0.58
PHACTR4-204ENST00000493669 TMC3Q7Z5M5 1100 aa11.46□□□□□ -0.58
PHACTR4-204ENST00000493669 ZDHHC14Q8IZN3 488 aa11.46□□□□□ -0.58
PHACTR4-204ENST00000493669 EXD1Q8NHP7 514 aa11.46□□□□□ -0.58
PHACTR4-204ENST00000493669 TRIM7Q9C029 511 aa11.46□□□□□ -0.58
PHACTR4-204ENST00000493669 ZDHHC18Q9NUE0 388 aa11.46□□□□□ -0.58
PHACTR4-204ENST00000493669 FEZ2Q9UHY8 353 aaPredicted RBP11.46□□□□□ -0.58
PHACTR4-204ENST00000493669 GNEQ9Y223 722 aaKnown RBP11.46□□□□□ -0.58
PHACTR4-204ENST00000493669 PPFIA2O75334 1257 aa11.45□□□□□ -0.58
PHACTR4-204ENST00000493669 HSD17B3P37058 310 aa11.45□□□□□ -0.58
PHACTR4-204ENST00000493669 CETN2P41208 172 aa11.45□□□□□ -0.58
PHACTR4-204ENST00000493669 TTC27Q6P3X3 843 aa11.45□□□□□ -0.58
PHACTR4-204ENST00000493669 SCARA5Q6ZMJ2 495 aa11.45□□□□□ -0.58
PHACTR4-204ENST00000493669 NIPA2Q8N8Q9 360 aa11.45□□□□□ -0.58
PHACTR4-204ENST00000493669 C3orf20Q8ND61 904 aa11.45□□□□□ -0.58
PHACTR4-204ENST00000493669 GRK7Q8WTQ7 553 aa11.45□□□□□ -0.58
PHACTR4-204ENST00000493669 CPB2Q96IY4 423 aa11.45□□□□□ -0.58
PHACTR4-204ENST00000493669 GCOM2Q9BZD3 368 aaPredicted RBP11.45□□□□□ -0.58
PHACTR4-204ENST00000493669 DPH5Q9H2P9 285 aa11.45□□□□□ -0.58
PHACTR4-204ENST00000493669 SMIM35A0A1B0GVV1 85 aa11.45□□□□□ -0.58
PHACTR4-204ENST00000493669 MBLAC1A4D2B0 266 aaPredicted RBP11.45□□□□□ -0.58
PHACTR4-204ENST00000493669 MEFVO15553 781 aaPredicted RBP11.45□□□□□ -0.58
PHACTR4-204ENST00000493669 ECEL1O95672 775 aa11.45□□□□□ -0.58
PHACTR4-204ENST00000493669 ITGB3P05106 788 aa11.45□□□□□ -0.58
PHACTR4-204ENST00000493669 LMAN1P49257 510 aa11.45□□□□□ -0.58
PHACTR4-204ENST00000493669 RBP5P82980 135 aa11.45□□□□□ -0.58
PHACTR4-204ENST00000493669 PIGHQ14442 188 aaPredicted RBP11.45□□□□□ -0.58
PHACTR4-204ENST00000493669 WDR72Q3MJ13 1102 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms