RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 CLEC14AQ86T13 490 aa5.37□□□□□ -1.55
VPS13A-212ENST00000493341 YAF2Q8IY57 180 aa5.37□□□□□ -1.55
VPS13A-212ENST00000493341 ZDHHC14Q8IZN3 488 aa5.37□□□□□ -1.55
VPS13A-212ENST00000493341 GPATCH11Q8N954 259 aa5.37□□□□□ -1.55
VPS13A-212ENST00000493341 SMARCC2Q8TAQ2 1214 aa5.37□□□□□ -1.55
VPS13A-212ENST00000493341 SPPL3Q8TCT6 385 aa5.37□□□□□ -1.55
VPS13A-212ENST00000493341 SNRNP27Q8WVK2 155 aaKnown RBP5.37□□□□□ -1.55
VPS13A-212ENST00000493341 CPA5Q8WXQ8 436 aa5.37□□□□□ -1.55
VPS13A-212ENST00000493341 HTRA1Q92743 480 aa5.37□□□□□ -1.55
VPS13A-212ENST00000493341 SPSB4Q96A44 273 aa5.37□□□□□ -1.55
VPS13A-212ENST00000493341 TAF1DQ9H5J8 278 aaPredicted RBP5.37□□□□□ -1.55
VPS13A-212ENST00000493341 HEYLQ9NQ87 328 aaPredicted RBP5.37□□□□□ -1.55
VPS13A-212ENST00000493341 MOCS1Q9NZB8 636 aa5.37□□□□□ -1.55
VPS13A-212ENST00000493341 CFAP97Q9P2B7 532 aa5.37□□□□□ -1.55
VPS13A-212ENST00000493341 TCRBV7S2A1N4TA0A589 114 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 TEX33O43247 280 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 GRPP07492 148 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 MTHFD1P11586 935 aaKnown RBP5.36□□□□□ -1.55
VPS13A-212ENST00000493341 JUPP14923 745 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 ALOX15P16050 662 aaPredicted RBP5.36□□□□□ -1.55
VPS13A-212ENST00000493341 COPAP53621 1224 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 POU6F2P78424 691 aaPredicted RBP5.36□□□□□ -1.55
VPS13A-212ENST00000493341 MXRA7P84157 204 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 MAPK7Q13164 816 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 EIF4HQ15056 248 aaKnown RBP5.36□□□□□ -1.55
VPS13A-212ENST00000493341 ITPRIPL1Q6GPH6 555 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 CRTC1Q6UUV9 634 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 VSIG10LQ86VR7 867 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 RTKN2Q8IZC4 609 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 OR1N1Q8NGS0 311 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 GCDHQ92947 438 aaPredicted RBP5.36□□□□□ -1.55
VPS13A-212ENST00000493341 KCNC2Q96PR1 638 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 PACSIN1Q9BY11 444 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 PCDHAC1Q9H158 963 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 PLEKHA5Q9HAU0 1116 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 HERC5Q9UII4 1024 aaKnown RBP5.36□□□□□ -1.55
VPS13A-212ENST00000493341 ANGEL1Q9UNK9 670 aaKnown RBP5.36□□□□□ -1.55
VPS13A-212ENST00000493341 JAG2Q9Y219 1238 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 TMX2Q9Y320 296 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 PAXBP1Q9Y5B6 917 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 MBD3L4A6NDZ8 208 aaPredicted RBP5.36□□□□□ -1.55
VPS13A-212ENST00000493341 MBD3L3A6NE82 208 aaPredicted RBP5.36□□□□□ -1.55
VPS13A-212ENST00000493341 ABLIM1O14639 778 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 DNAJB5O75953 348 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 TOX4O94842 621 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 KLHL18O94889 574 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 A1BGP04217 495 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 RARBP10826 455 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 POLD1P28340 1107 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 ADD2P35612 726 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 PRKAA2P54646 552 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 NR1H2P55055 460 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 NCKAP1LP55160 1127 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 INTS5Q6P9B9 1019 aaKnown RBP5.36□□□□□ -1.55
VPS13A-212ENST00000493341 ZNF572Q7Z3I7 529 aaPredicted RBP5.36□□□□□ -1.55
VPS13A-212ENST00000493341 HERC6Q8IVU3 1022 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 PLA2G15Q8NCC3 412 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 IL17RDQ8NFM7 739 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 HERVK_113Q902F9 699 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 EID2BQ96D98 161 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 PAK6Q9NQU5 681 aaPredicted RBP5.36□□□□□ -1.55
VPS13A-212ENST00000493341 OLA1Q9NTK5 396 aaKnown RBP5.36□□□□□ -1.55
VPS13A-212ENST00000493341 AASSQ9UDR5 926 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 SLC23A1Q9UHI7 598 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 ZMYND8Q9ULU4 1186 aaPredicted RBP5.36□□□□□ -1.55
VPS13A-212ENST00000493341 CTNND2Q9UQB3 1225 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 VWA7Q9Y334 891 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 HS3ST4Q9Y661 456 aa5.36□□□□□ -1.55
VPS13A-212ENST00000493341 ZMYM3Q14202 1370 aa5.35□□□□□ -1.55
VPS13A-212ENST00000493341 A0A087WWL8 130 aa5.35□□□□□ -1.55
VPS13A-212ENST00000493341 C2orf78A6NCI8 922 aa5.35□□□□□ -1.55
VPS13A-212ENST00000493341 ZNF785A8K8V0 405 aa5.35□□□□□ -1.55
VPS13A-212ENST00000493341 KNG1P01042 644 aa5.35□□□□□ -1.55
VPS13A-212ENST00000493341 PRNPP04156 253 aa5.35□□□□□ -1.55
VPS13A-212ENST00000493341 BTF3P20290 206 aaKnown RBP5.35□□□□□ -1.55
VPS13A-212ENST00000493341 CST5P28325 142 aaPredicted RBP5.35□□□□□ -1.55
VPS13A-212ENST00000493341 CASRP41180 1078 aa5.35□□□□□ -1.55
VPS13A-212ENST00000493341 SP140Q13342 867 aa5.35□□□□□ -1.55
VPS13A-212ENST00000493341 SLC29A2Q14542 456 aa5.35□□□□□ -1.55
VPS13A-212ENST00000493341 ICE2Q659A1 982 aa5.35□□□□□ -1.55
VPS13A-212ENST00000493341 ARL6IP4Q66PJ3 421 aaKnown RBP5.35□□□□□ -1.55
VPS13A-212ENST00000493341 RAP1GAP2Q684P5 730 aa5.35□□□□□ -1.55
VPS13A-212ENST00000493341 TCP11L2Q8N4U5 519 aa5.35□□□□□ -1.55
VPS13A-212ENST00000493341 CFHR4Q92496 578 aa5.35□□□□□ -1.55
VPS13A-212ENST00000493341 COG8Q96MW5 612 aa5.35□□□□□ -1.55
VPS13A-212ENST00000493341 GORASP1Q9BQQ3 440 aa5.35□□□□□ -1.55
VPS13A-212ENST00000493341 CHCHD6Q9BRQ6 235 aa5.35□□□□□ -1.55
VPS13A-212ENST00000493341 MS4A7Q9GZW8 240 aaPredicted RBP5.35□□□□□ -1.55
VPS13A-212ENST00000493341 EPS8L2Q9H6S3 715 aa5.35□□□□□ -1.55
VPS13A-212ENST00000493341 JMJD4Q9H9V9 463 aa5.35□□□□□ -1.55
VPS13A-212ENST00000493341 TMEM8AQ9HCN3 771 aa5.35□□□□□ -1.55
VPS13A-212ENST00000493341 FAM155BO75949 473 aa5.35□□□□□ -1.55
VPS13A-212ENST00000493341 ACTL6BO94805 426 aa5.35□□□□□ -1.55
VPS13A-212ENST00000493341 RNASE1P07998 156 aaKnown RBP5.35□□□□□ -1.55
VPS13A-212ENST00000493341 EGR1P18146 543 aa5.35□□□□□ -1.55
VPS13A-212ENST00000493341 MEOX1P50221 254 aa5.35□□□□□ -1.55
VPS13A-212ENST00000493341 TLE2Q04725 743 aa5.35□□□□□ -1.55
VPS13A-212ENST00000493341 UBE3AQ05086 875 aa5.35□□□□□ -1.55
VPS13A-212ENST00000493341 SLC12A1Q13621 1099 aa5.35□□□□□ -1.55
VPS13A-212ENST00000493341 MAPKAPK3Q16644 382 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms