RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 OXCT2Q9BYC2 517 aaPredicted RBP15.03■□□□□ -0
CCM2-217ENST00000492883 MMRN2Q9H8L6 949 aa15.03■□□□□ -0
CCM2-217ENST00000492883 METTL14Q9HCE5 456 aaKnown RBP15.03■□□□□ -0
CCM2-217ENST00000492883 DZANK1Q9NVP4 752 aa15.03■□□□□ -0
CCM2-217ENST00000492883 ARMCX3Q9UH62 379 aaPredicted RBP15.03■□□□□ -0
CCM2-217ENST00000492883 RWDD2AQ9UIY3 292 aa15.03■□□□□ -0
CCM2-217ENST00000492883 FBXL5Q9UKA1 691 aa15.03■□□□□ -0
CCM2-217ENST00000492883 PLXNA4Q9HCM2 1894 aa15.03■□□□□ -0
CCM2-217ENST00000492883 TDRD15B5MCY1 1934 aaKnown RBP15.02■□□□□ -0
CCM2-217ENST00000492883 TBC1D4O60343 1298 aa15.02■□□□□ -0
CCM2-217ENST00000492883 STX10O60499 249 aa15.02■□□□□ -0
CCM2-217ENST00000492883 C1RP00736 705 aa15.02■□□□□ -0
CCM2-217ENST00000492883 CYP11A1P05108 521 aa15.02■□□□□ -0
CCM2-217ENST00000492883 PTMSP20962 102 aa15.02■□□□□ -0
CCM2-217ENST00000492883 ATICP31939 592 aa15.02■□□□□ -0
CCM2-217ENST00000492883 GCLMP48507 274 aa15.02■□□□□ -0
CCM2-217ENST00000492883 MYL6P60660 151 aa15.02■□□□□ -0
CCM2-217ENST00000492883 NCOA4Q13772 614 aa15.02■□□□□ -0
CCM2-217ENST00000492883 PUS10Q3MIT2 529 aaKnown RBP15.02■□□□□ -0
CCM2-217ENST00000492883 DPCR1Q3MIW9 517 aa15.02■□□□□ -0
CCM2-217ENST00000492883 TCERG1LQ5VWI1 586 aa15.02■□□□□ -0
CCM2-217ENST00000492883 SLC8B1Q6J4K2 584 aa15.02■□□□□ -0
CCM2-217ENST00000492883 LILRA6Q6PI73 481 aa15.02■□□□□ -0
CCM2-217ENST00000492883 KREMEN2Q8NCW0 462 aa15.02■□□□□ -0
CCM2-217ENST00000492883 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.02■□□□□ -0
CCM2-217ENST00000492883 SYAP1Q96A49 352 aaPredicted RBP15.02■□□□□ -0
CCM2-217ENST00000492883 MSLNLQ96KJ4 702 aa15.02■□□□□ -0
CCM2-217ENST00000492883 ASB2Q96Q27 587 aa15.02■□□□□ -0
CCM2-217ENST00000492883 MMS19Q96T76 1030 aa15.02■□□□□ -0
CCM2-217ENST00000492883 PLEKHA4Q9H4M7 779 aa15.02■□□□□ -0
CCM2-217ENST00000492883 MAN1C1Q9NR34 630 aa15.02■□□□□ -0
CCM2-217ENST00000492883 GDAP2Q9NXN4 497 aa15.02■□□□□ -0
CCM2-217ENST00000492883 OR6C75A6NL08 312 aa15.01□□□□□ -0.01
CCM2-217ENST00000492883 GNA14O95837 355 aa15.01□□□□□ -0.01
CCM2-217ENST00000492883 CPB1P15086 417 aa15.01□□□□□ -0.01
CCM2-217ENST00000492883 ELF1P32519 619 aa15.01□□□□□ -0.01
CCM2-217ENST00000492883 GTF2H1P32780 548 aa15.01□□□□□ -0.01
CCM2-217ENST00000492883 KCNQ1P51787 676 aa15.01□□□□□ -0.01
CCM2-217ENST00000492883 TNNC1P63316 161 aa15.01□□□□□ -0.01
CCM2-217ENST00000492883 PPP3CAQ08209 521 aa15.01□□□□□ -0.01
CCM2-217ENST00000492883 TPD52L1Q16890 204 aaPredicted RBP15.01□□□□□ -0.01
CCM2-217ENST00000492883 SGSM1Q2NKQ1 1148 aa15.01□□□□□ -0.01
CCM2-217ENST00000492883 WDR72Q3MJ13 1102 aa15.01□□□□□ -0.01
CCM2-217ENST00000492883 ZACNQ401N2 412 aa15.01□□□□□ -0.01
CCM2-217ENST00000492883 DCAF17Q5H9S7 520 aaPredicted RBP15.01□□□□□ -0.01
CCM2-217ENST00000492883 C1orf220Q5T0J3 134 aa15.01□□□□□ -0.01
CCM2-217ENST00000492883 SYCE2Q6PIF2 218 aa15.01□□□□□ -0.01
CCM2-217ENST00000492883 RBM43Q6ZSC3 357 aaKnown RBP15.01□□□□□ -0.01
CCM2-217ENST00000492883 FRMD5Q7Z6J6 570 aa15.01□□□□□ -0.01
CCM2-217ENST00000492883 CREBRFQ8IUR6 639 aa15.01□□□□□ -0.01
CCM2-217ENST00000492883 PDCL2Q8N4E4 241 aa15.01□□□□□ -0.01
CCM2-217ENST00000492883 TOP6BLQ8N6T0 577 aa15.01□□□□□ -0.01
CCM2-217ENST00000492883 C12orf76Q8N812 135 aaPredicted RBP15.01□□□□□ -0.01
CCM2-217ENST00000492883 ZNF461Q8TAF7 563 aa15.01□□□□□ -0.01
CCM2-217ENST00000492883 HDAC7Q8WUI4 952 aa15.01□□□□□ -0.01
CCM2-217ENST00000492883 NXF1Q9UBU9 619 aaKnown RBP15.01□□□□□ -0.01
CCM2-217ENST00000492883 FAM50BQ9Y247 325 aa15.01□□□□□ -0.01
CCM2-217ENST00000492883 PRRC2BQ5JSZ5 2229 aaKnown RBP15.01□□□□□ -0.01
CCM2-217ENST00000492883 CHD7Q9P2D1 2997 aa15□□□□□ -0.01
CCM2-217ENST00000492883 PIK3CAP42336 1068 aa15□□□□□ -0.01
CCM2-217ENST00000492883 ROR1Q01973 937 aa15□□□□□ -0.01
CCM2-217ENST00000492883 ZNF699Q32M78 642 aa15□□□□□ -0.01
CCM2-217ENST00000492883 RARS2Q5T160 578 aaKnown RBP15□□□□□ -0.01
CCM2-217ENST00000492883 LIN9Q5TKA1 542 aa15□□□□□ -0.01
CCM2-217ENST00000492883 KRT39Q6A163 491 aa15□□□□□ -0.01
CCM2-217ENST00000492883 PTCRAQ6ISU1 281 aaPredicted RBP15□□□□□ -0.01
CCM2-217ENST00000492883 CES5AQ6NT32 575 aa15□□□□□ -0.01
CCM2-217ENST00000492883 CAVIN1Q6NZI2 390 aaKnown RBP15□□□□□ -0.01
CCM2-217ENST00000492883 DPH6Q7L8W6 267 aa15□□□□□ -0.01
CCM2-217ENST00000492883 TMEM86AQ8N2M4 240 aa15□□□□□ -0.01
CCM2-217ENST00000492883 CCDC150Q8NCX0 1101 aa15□□□□□ -0.01
CCM2-217ENST00000492883 S1PR5Q9H228 398 aa15□□□□□ -0.01
CCM2-217ENST00000492883 SFXN1Q9H9B4 322 aa15□□□□□ -0.01
CCM2-217ENST00000492883 TMEM8AQ9HCN3 771 aa15□□□□□ -0.01
CCM2-217ENST00000492883 TMEM63CQ9P1W3 806 aa15□□□□□ -0.01
CCM2-217ENST00000492883 L1RE1Q9UN81 338 aa15□□□□□ -0.01
CCM2-217ENST00000492883 CCDC195A0A1B0GUA6 201 aa14.99□□□□□ -0.01
CCM2-217ENST00000492883 WDR27A2RRH5 827 aa14.99□□□□□ -0.01
CCM2-217ENST00000492883 MBTPS2O43462 519 aa14.99□□□□□ -0.01
CCM2-217ENST00000492883 ABLIM3O94929 683 aa14.99□□□□□ -0.01
CCM2-217ENST00000492883 VNN1O95497 513 aa14.99□□□□□ -0.01
CCM2-217ENST00000492883 STAU1O95793 577 aaKnown RBP14.99□□□□□ -0.01
CCM2-217ENST00000492883 HLA-DRAP01903 254 aa14.99□□□□□ -0.01
CCM2-217ENST00000492883 OR4Q2P0C623 313 aa14.99□□□□□ -0.01
CCM2-217ENST00000492883 CCDC192P0DO97 292 aa14.99□□□□□ -0.01
CCM2-217ENST00000492883 ERCC5P28715 1186 aaPredicted RBP14.99□□□□□ -0.01
CCM2-217ENST00000492883 LHX1P48742 406 aa14.99□□□□□ -0.01
CCM2-217ENST00000492883 MCCD1P59942 119 aaPredicted RBP14.99□□□□□ -0.01
CCM2-217ENST00000492883 ITIH3Q06033 890 aa14.99□□□□□ -0.01
CCM2-217ENST00000492883 SMAD4Q13485 552 aaKnown RBP14.99□□□□□ -0.01
CCM2-217ENST00000492883 SOWAHAQ2M3V2 549 aa14.99□□□□□ -0.01
CCM2-217ENST00000492883 ZNF667Q5HYK9 610 aa14.99□□□□□ -0.01
CCM2-217ENST00000492883 CT47A1Q5JQC4 288 aaPredicted RBP14.99□□□□□ -0.01
CCM2-217ENST00000492883 TPGS2Q68CL5 300 aa14.99□□□□□ -0.01
CCM2-217ENST00000492883 TMC5Q6UXY8 1006 aa14.99□□□□□ -0.01
CCM2-217ENST00000492883 C15orf39Q6ZRI6 1047 aa14.99□□□□□ -0.01
CCM2-217ENST00000492883 ADGRF2Q8IZF7 708 aa14.99□□□□□ -0.01
CCM2-217ENST00000492883 SMRP1Q8NCR6 262 aa14.99□□□□□ -0.01
CCM2-217ENST00000492883 IMPG2Q9BZV3 1241 aa14.99□□□□□ -0.01
CCM2-217ENST00000492883 XYLT2Q9H1B5 865 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms