RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 GFM2Q969S9 779 aaKnown RBP3.56□□□□□ -1.84
SNX13-209ENST00000492626 PRDM7Q9NQW5 492 aa3.56□□□□□ -1.84
SNX13-209ENST00000492626 GPRC5BQ9NZH0 403 aa3.56□□□□□ -1.84
SNX13-209ENST00000492626 LRFN1Q9P244 771 aa3.56□□□□□ -1.84
SNX13-209ENST00000492626 CDC23Q9UJX2 597 aa3.56□□□□□ -1.84
SNX13-209ENST00000492626 EPB41L2O43491 1005 aaKnown RBP3.55□□□□□ -1.84
SNX13-209ENST00000492626 SLC5A1P13866 664 aa3.55□□□□□ -1.84
SNX13-209ENST00000492626 MAN1A1P33908 653 aa3.55□□□□□ -1.84
SNX13-209ENST00000492626 PIK3CBP42338 1070 aa3.55□□□□□ -1.84
SNX13-209ENST00000492626 KIR3DS1Q14943 382 aa3.55□□□□□ -1.84
SNX13-209ENST00000492626 ZC3H10Q96K80 434 aaKnown RBP3.55□□□□□ -1.84
SNX13-209ENST00000492626 PDGFDQ9GZP0 370 aaPredicted RBP3.55□□□□□ -1.84
SNX13-209ENST00000492626 ZSCAN32Q9NX65 697 aa3.55□□□□□ -1.84
SNX13-209ENST00000492626 MOCS1Q9NZB8 636 aa3.55□□□□□ -1.84
SNX13-209ENST00000492626 A6NNZ2 444 aa3.55□□□□□ -1.84
SNX13-209ENST00000492626 TGFB1P01137 390 aa3.55□□□□□ -1.84
SNX13-209ENST00000492626 GNAI2P04899 355 aa3.55□□□□□ -1.84
SNX13-209ENST00000492626 MYF5P13349 255 aa3.55□□□□□ -1.84
SNX13-209ENST00000492626 ADCY8P40145 1251 aa3.55□□□□□ -1.84
SNX13-209ENST00000492626 KHDC1Q4VXA5 237 aaKnown RBP3.55□□□□□ -1.84
SNX13-209ENST00000492626 LRSAM1Q6UWE0 723 aa3.55□□□□□ -1.84
SNX13-209ENST00000492626 GAREM2Q75VX8 874 aa3.55□□□□□ -1.84
SNX13-209ENST00000492626 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.55□□□□□ -1.84
SNX13-209ENST00000492626 KIRREL1Q96J84 757 aa3.55□□□□□ -1.84
SNX13-209ENST00000492626 TACO1Q9BSH4 297 aaKnown RBP3.55□□□□□ -1.84
SNX13-209ENST00000492626 AS3MTQ9HBK9 375 aa3.55□□□□□ -1.84
SNX13-209ENST00000492626 SPATA6Q9NWH7 488 aaPredicted RBP3.55□□□□□ -1.84
SNX13-209ENST00000492626 CALCOCO1Q9P1Z2 691 aa3.55□□□□□ -1.84
SNX13-209ENST00000492626 ZFP69BQ9UJL9 534 aa3.55□□□□□ -1.84
SNX13-209ENST00000492626 FBXO2Q9UK22 296 aaPredicted RBP3.55□□□□□ -1.84
SNX13-209ENST00000492626 FBXO9Q9UK97 447 aaPredicted RBP3.55□□□□□ -1.84
SNX13-209ENST00000492626 ITGB1BP2Q9UKP3 347 aa3.55□□□□□ -1.84
SNX13-209ENST00000492626 IPPQ9Y573 584 aa3.55□□□□□ -1.84
SNX13-209ENST00000492626 A0A088AWK7 358 aa3.55□□□□□ -1.84
SNX13-209ENST00000492626 NCAM1P13591 858 aa3.55□□□□□ -1.84
SNX13-209ENST00000492626 XBP1P17861 261 aa3.55□□□□□ -1.84
SNX13-209ENST00000492626 RAB32Q13637 225 aa3.55□□□□□ -1.84
SNX13-209ENST00000492626 FKBP15Q5T1M5 1219 aa3.55□□□□□ -1.84
SNX13-209ENST00000492626 PPHLN1Q8NEY8 458 aaKnown RBP3.55□□□□□ -1.84
SNX13-209ENST00000492626 WDR12Q9GZL7 423 aaKnown RBP3.55□□□□□ -1.84
SNX13-209ENST00000492626 PCDHGB2Q9Y5G2 931 aa3.55□□□□□ -1.84
SNX13-209ENST00000492626 GPR32O75388 356 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 CSTBP04080 98 aaKnown RBP3.54□□□□□ -1.84
SNX13-209ENST00000492626 FUT4P22083 530 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 PTPN7P35236 360 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 SREBF2Q12772 1141 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 HABP2Q14520 560 aaPredicted RBP3.54□□□□□ -1.84
SNX13-209ENST00000492626 NCAPD2Q15021 1401 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 MAPRE1Q15691 268 aaKnown RBP3.54□□□□□ -1.84
SNX13-209ENST00000492626 JAKMIP3Q5VZ66 844 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 ZNF574Q6ZN55 896 aaPredicted RBP3.54□□□□□ -1.84
SNX13-209ENST00000492626 NBPF11Q86T75 865 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 SENP7Q9BQF6 1050 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 ISCA1Q9BUE6 129 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 PACSIN1Q9BY11 444 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 PITHD1Q9GZP4 211 aaPredicted RBP3.54□□□□□ -1.84
SNX13-209ENST00000492626 FBLN5Q9UBX5 448 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 PCDHA1Q9Y5I3 950 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 SLX4Q8IY92 1834 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 A0A0G2JNJ9 132 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 NRP1O14786 923 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 HNRNPDLO14979 420 aaKnown RBP3.54□□□□□ -1.84
SNX13-209ENST00000492626 FFAR2O15552 330 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 TLR5O60602 858 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 TYRP1P17643 537 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 WNT3AP56704 352 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 PTH1RQ03431 593 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 DDX10Q13206 875 aaKnown RBP3.54□□□□□ -1.84
SNX13-209ENST00000492626 TBX2Q13207 712 aaPredicted RBP3.54□□□□□ -1.84
SNX13-209ENST00000492626 DAG1Q14118 895 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 GALEQ14376 348 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 CNGA2Q16280 664 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 ARL13BQ3SXY8 428 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.54□□□□□ -1.84
SNX13-209ENST00000492626 TNPO1Q92973 898 aaKnown RBP3.54□□□□□ -1.84
SNX13-209ENST00000492626 TMEM41AQ96HV5 264 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 TBATAQ96M53 351 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 VRK1Q99986 396 aaPredicted RBP3.54□□□□□ -1.84
SNX13-209ENST00000492626 AMNQ9BXJ7 453 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 AGO4Q9HCK5 861 aaKnown RBP3.54□□□□□ -1.84
SNX13-209ENST00000492626 NCDNQ9UBB6 729 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 Q9UFV3 132 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 AFF4Q9UHB7 1163 aaKnown RBP3.54□□□□□ -1.84
SNX13-209ENST00000492626 HDAC9Q9UKV0 1011 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 YBX2Q9Y2T7 364 aaKnown RBP3.54□□□□□ -1.84
SNX13-209ENST00000492626 H0Y858 1186 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 IL2RBP14784 551 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 HOXA10P31260 410 aaPredicted RBP3.54□□□□□ -1.84
SNX13-209ENST00000492626 ERVFRD-1P60508 538 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 ZNF543Q08ER8 600 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 RSRC2Q7L4I2 434 aaKnown RBP3.54□□□□□ -1.84
SNX13-209ENST00000492626 MAATS1Q7Z4T9 603 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 MIB1Q86YT6 1006 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 UNC5BQ8IZJ1 945 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 TRAPPC12Q8WVT3 735 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 RAB24Q969Q5 203 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 OSBPL6Q9BZF3 934 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 PCDHA6Q9UN73 950 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 SIK3Q9Y2K2 1263 aa3.54□□□□□ -1.84
SNX13-209ENST00000492626 TCERG1O14776 1098 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms