RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 KMT2EQ8IZD2 1858 aa26.65■■□□□ 1.86
UPF3A-209ENST00000492270 ZNF233A6NK53 670 aa26.64■■□□□ 1.86
UPF3A-209ENST00000492270 POU2F2P09086 479 aa26.64■■□□□ 1.86
UPF3A-209ENST00000492270 KRBA2Q6ZNG9 492 aa26.64■■□□□ 1.86
UPF3A-209ENST00000492270 RDH13Q8NBN7 331 aa26.64■■□□□ 1.86
UPF3A-209ENST00000492270 ST13P5Q8NFI4 369 aaPredicted RBP26.64■■□□□ 1.86
UPF3A-209ENST00000492270 PGLYRP2Q96PD5 576 aa26.64■■□□□ 1.86
UPF3A-209ENST00000492270 EPS15L1Q9UBC2 864 aa26.64■■□□□ 1.86
UPF3A-209ENST00000492270 AFF4Q9UHB7 1163 aaKnown RBP26.64■■□□□ 1.86
UPF3A-209ENST00000492270 AGAP1Q9UPQ3 857 aa26.64■■□□□ 1.86
UPF3A-209ENST00000492270 CYB561D2O14569 222 aa26.63■■□□□ 1.85
UPF3A-209ENST00000492270 LRG1P02750 347 aa26.63■■□□□ 1.85
UPF3A-209ENST00000492270 CYP11A1P05108 521 aa26.63■■□□□ 1.85
UPF3A-209ENST00000492270 PAX3P23760 479 aa26.63■■□□□ 1.85
UPF3A-209ENST00000492270 KNOP1Q1ED39 458 aaKnown RBP26.63■■□□□ 1.85
UPF3A-209ENST00000492270 SV2CQ496J9 727 aa26.63■■□□□ 1.85
UPF3A-209ENST00000492270 RTL10Q7L3V2 364 aa26.63■■□□□ 1.85
UPF3A-209ENST00000492270 OR5B17Q8NGF7 314 aa26.63■■□□□ 1.85
UPF3A-209ENST00000492270 OR10T2Q8NGX3 314 aa26.63■■□□□ 1.85
UPF3A-209ENST00000492270 ITFG1Q8TB96 612 aa26.63■■□□□ 1.85
UPF3A-209ENST00000492270 CACTINQ8WUQ7 758 aaKnown RBP26.63■■□□□ 1.85
UPF3A-209ENST00000492270 RSAD2Q8WXG1 361 aa26.63■■□□□ 1.85
UPF3A-209ENST00000492270 ASIC4Q96FT7 647 aa26.63■■□□□ 1.85
UPF3A-209ENST00000492270 ZNF560Q96MR9 790 aa26.63■■□□□ 1.85
UPF3A-209ENST00000492270 KCNK12Q9HB15 430 aa26.63■■□□□ 1.85
UPF3A-209ENST00000492270 SIX4Q9UIU6 781 aa26.63■■□□□ 1.85
UPF3A-209ENST00000492270 ZNF318Q5VUA4 2279 aa26.62■■□□□ 1.85
UPF3A-209ENST00000492270 OR6C75A6NL08 312 aa26.62■■□□□ 1.85
UPF3A-209ENST00000492270 KPNA7A9QM74 516 aa26.62■■□□□ 1.85
UPF3A-209ENST00000492270 ZNF202O95125 648 aa26.62■■□□□ 1.85
UPF3A-209ENST00000492270 RPN1P04843 607 aaKnown RBP26.62■■□□□ 1.85
UPF3A-209ENST00000492270 TMEM191BP0C7N4 346 aa26.62■■□□□ 1.85
UPF3A-209ENST00000492270 LAMP2P13473 410 aa26.62■■□□□ 1.85
UPF3A-209ENST00000492270 SNRNP35Q16560 246 aaKnown RBP26.62■■□□□ 1.85
UPF3A-209ENST00000492270 HS2ST1Q7LGA3 356 aa26.62■■□□□ 1.85
UPF3A-209ENST00000492270 CSGALNACT2Q8N6G5 542 aa26.62■■□□□ 1.85
UPF3A-209ENST00000492270 RTP3Q9BQQ7 232 aa26.62■■□□□ 1.85
UPF3A-209ENST00000492270 CRISPLD1Q9H336 500 aa26.62■■□□□ 1.85
UPF3A-209ENST00000492270 INTS13Q9NVM9 706 aa26.62■■□□□ 1.85
UPF3A-209ENST00000492270 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.62■■□□□ 1.85
UPF3A-209ENST00000492270 MYL1P05976 194 aa26.61■■□□□ 1.85
UPF3A-209ENST00000492270 KRT19P08727 400 aa26.61■■□□□ 1.85
UPF3A-209ENST00000492270 CDR1P51861 262 aa26.61■■□□□ 1.85
UPF3A-209ENST00000492270 DPYDQ12882 1025 aa26.61■■□□□ 1.85
UPF3A-209ENST00000492270 PABPC1LQ4VXU2 614 aaKnown RBP26.61■■□□□ 1.85
UPF3A-209ENST00000492270 WSCD1Q658N2 575 aa26.61■■□□□ 1.85
UPF3A-209ENST00000492270 XXYLT1Q8NBI6 393 aa26.61■■□□□ 1.85
UPF3A-209ENST00000492270 OXCT2Q9BYC2 517 aaPredicted RBP26.61■■□□□ 1.85
UPF3A-209ENST00000492270 KIAA1586Q9HCI6 787 aa26.61■■□□□ 1.85
UPF3A-209ENST00000492270 ITGA11Q9UKX5 1188 aa26.61■■□□□ 1.85
UPF3A-209ENST00000492270 RHOP08100 348 aa26.6■■□□□ 1.85
UPF3A-209ENST00000492270 SNRPFP62306 86 aaKnown RBP26.6■■□□□ 1.85
UPF3A-209ENST00000492270 BFSP1Q12934 665 aa26.6■■□□□ 1.85
UPF3A-209ENST00000492270 PSMD2Q13200 908 aa26.6■■□□□ 1.85
UPF3A-209ENST00000492270 GPR17Q13304 367 aa26.6■■□□□ 1.85
UPF3A-209ENST00000492270 MYBPC2Q14324 1141 aa26.6■■□□□ 1.85
UPF3A-209ENST00000492270 SLC5A9Q2M3M2 681 aa26.6■■□□□ 1.85
UPF3A-209ENST00000492270 UBALD2Q8IYN6 164 aa26.6■■□□□ 1.85
UPF3A-209ENST00000492270 ING5Q8WYH8 240 aa26.6■■□□□ 1.85
UPF3A-209ENST00000492270 ANKRD36BP1Q96IX9 119 aa26.6■■□□□ 1.85
UPF3A-209ENST00000492270 DSEQ9UL01 958 aa26.6■■□□□ 1.85
UPF3A-209ENST00000492270 YIPF1Q9Y548 306 aa26.6■■□□□ 1.85
UPF3A-209ENST00000492270 MTMR11A4FU01 709 aa26.59■■□□□ 1.85
UPF3A-209ENST00000492270 PNPLA4P41247 253 aa26.59■■□□□ 1.85
UPF3A-209ENST00000492270 CYP24A1Q07973 514 aa26.59■■□□□ 1.85
UPF3A-209ENST00000492270 TWF1Q12792 350 aa26.59■■□□□ 1.85
UPF3A-209ENST00000492270 SURF1Q15526 300 aa26.59■■□□□ 1.85
UPF3A-209ENST00000492270 METTL23Q86XA0 190 aa26.59■■□□□ 1.85
UPF3A-209ENST00000492270 C12orf56Q8IXR9 622 aa26.59■■□□□ 1.85
UPF3A-209ENST00000492270 TTC9BQ8N6N2 239 aa26.59■■□□□ 1.85
UPF3A-209ENST00000492270 LRRC52Q8N7C0 313 aa26.59■■□□□ 1.85
UPF3A-209ENST00000492270 FGF13Q92913 245 aa26.59■■□□□ 1.85
UPF3A-209ENST00000492270 PBXIP1Q96AQ6 731 aa26.59■■□□□ 1.85
UPF3A-209ENST00000492270 CEP72Q9P209 647 aa26.59■■□□□ 1.85
UPF3A-209ENST00000492270 IGSF9Q9P2J2 1179 aa26.59■■□□□ 1.85
UPF3A-209ENST00000492270 CDH7Q9ULB5 785 aa26.59■■□□□ 1.85
UPF3A-209ENST00000492270 NARSO43776 548 aaKnown RBP26.58■■□□□ 1.85
UPF3A-209ENST00000492270 PDGFBP01127 241 aaPredicted RBP26.58■■□□□ 1.85
UPF3A-209ENST00000492270 DLATP10515 647 aaKnown RBP26.58■■□□□ 1.85
UPF3A-209ENST00000492270 PTPN2P17706 415 aa26.58■■□□□ 1.85
UPF3A-209ENST00000492270 DUSP4Q13115 394 aa26.58■■□□□ 1.85
UPF3A-209ENST00000492270 TDGQ13569 410 aa26.58■■□□□ 1.85
UPF3A-209ENST00000492270 WDR49Q8IV35 697 aa26.58■■□□□ 1.85
UPF3A-209ENST00000492270 ATAD1Q8NBU5 361 aa26.58■■□□□ 1.85
UPF3A-209ENST00000492270 CORO1BQ9BR76 489 aa26.58■■□□□ 1.85
UPF3A-209ENST00000492270 GZF1Q9H116 711 aaPredicted RBP26.58■■□□□ 1.85
UPF3A-209ENST00000492270 KCTD10Q9H3F6 313 aa26.58■■□□□ 1.85
UPF3A-209ENST00000492270 CGNQ9P2M7 1197 aaKnown RBP26.58■■□□□ 1.85
UPF3A-209ENST00000492270 MAFFQ9ULX9 164 aa26.58■■□□□ 1.85
UPF3A-209ENST00000492270 L1RE1Q9UN81 338 aa26.58■■□□□ 1.85
UPF3A-209ENST00000492270 SLC27A5Q9Y2P5 690 aa26.58■■□□□ 1.85
UPF3A-209ENST00000492270 NRG2O14511 850 aaPredicted RBP26.57■■□□□ 1.84
UPF3A-209ENST00000492270 TNNC2P02585 160 aa26.57■■□□□ 1.84
UPF3A-209ENST00000492270 RBP5P82980 135 aa26.57■■□□□ 1.84
UPF3A-209ENST00000492270 HTR4Q13639 388 aa26.57■■□□□ 1.84
UPF3A-209ENST00000492270 PSMD6Q15008 389 aa26.57■■□□□ 1.84
UPF3A-209ENST00000492270 SLC39A12Q504Y0 691 aa26.57■■□□□ 1.84
UPF3A-209ENST00000492270 CENPPQ6IPU0 288 aa26.57■■□□□ 1.84
UPF3A-209ENST00000492270 POTEHQ6S545 545 aa26.57■■□□□ 1.84
UPF3A-209ENST00000492270 BMP8AQ7Z5Y6 402 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms