RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 CALCRLQ16602 461 aa12.87□□□□□ -0.35
CACNA1C-228ENST00000492150 EEF1DP3Q658K8 133 aa12.87□□□□□ -0.35
CACNA1C-228ENST00000492150 PKN3Q6P5Z2 889 aa12.87□□□□□ -0.35
CACNA1C-228ENST00000492150 BSNDQ8WZ55 320 aa12.87□□□□□ -0.35
CACNA1C-228ENST00000492150 SMARCD2Q92925 531 aa12.87□□□□□ -0.35
CACNA1C-228ENST00000492150 E2F7Q96AV8 911 aa12.87□□□□□ -0.35
CACNA1C-228ENST00000492150 CCDC43Q96MW1 224 aaKnown RBP12.87□□□□□ -0.35
CACNA1C-228ENST00000492150 NUSAP1Q9BXS6 441 aaKnown RBP12.87□□□□□ -0.35
CACNA1C-228ENST00000492150 TTC12Q9H892 705 aaPredicted RBP12.87□□□□□ -0.35
CACNA1C-228ENST00000492150 EBF1Q9UH73 591 aa12.87□□□□□ -0.35
CACNA1C-228ENST00000492150 CDY1Q9Y6F8 540 aa12.87□□□□□ -0.35
CACNA1C-228ENST00000492150 DOPEY2Q9Y3R5 2298 aa12.86□□□□□ -0.35
CACNA1C-228ENST00000492150 TEX51A0A1B0GUA7 166 aa12.86□□□□□ -0.35
CACNA1C-228ENST00000492150 WDR27A2RRH5 827 aa12.86□□□□□ -0.35
CACNA1C-228ENST00000492150 SLC38A8A6NNN8 435 aa12.86□□□□□ -0.35
CACNA1C-228ENST00000492150 TMEM189-UBE2V1I3L0A0 370 aa12.86□□□□□ -0.35
CACNA1C-228ENST00000492150 CHADO15335 359 aa12.86□□□□□ -0.35
CACNA1C-228ENST00000492150 CTDNEP1O95476 244 aa12.86□□□□□ -0.35
CACNA1C-228ENST00000492150 ENGP17813 658 aa12.86□□□□□ -0.35
CACNA1C-228ENST00000492150 TKTP29401 623 aaKnown RBP12.86□□□□□ -0.35
CACNA1C-228ENST00000492150 TXKP42681 527 aa12.86□□□□□ -0.35
CACNA1C-228ENST00000492150 TRIM61Q5EBN2 209 aa12.86□□□□□ -0.35
CACNA1C-228ENST00000492150 ZBTB8OSQ8IWT0 167 aa12.86□□□□□ -0.35
CACNA1C-228ENST00000492150 HDDC3Q8N4P3 179 aa12.86□□□□□ -0.35
CACNA1C-228ENST00000492150 FAM200AQ8TCP9 573 aa12.86□□□□□ -0.35
CACNA1C-228ENST00000492150 DDX27Q96GQ7 796 aaKnown RBP12.86□□□□□ -0.35
CACNA1C-228ENST00000492150 PPP1R10Q96QC0 940 aaKnown RBP12.86□□□□□ -0.35
CACNA1C-228ENST00000492150 MTMR9Q96QG7 549 aa12.86□□□□□ -0.35
CACNA1C-228ENST00000492150 CCDC113Q9H0I3 377 aa12.86□□□□□ -0.35
CACNA1C-228ENST00000492150 PDRG1Q9NUG6 133 aa12.86□□□□□ -0.35
CACNA1C-228ENST00000492150 GDAQ9Y2T3 454 aa12.86□□□□□ -0.35
CACNA1C-228ENST00000492150 BACE2Q9Y5Z0 518 aa12.86□□□□□ -0.35
CACNA1C-228ENST00000492150 KIF26AQ9ULI4 1882 aaPredicted RBP12.86□□□□□ -0.35
CACNA1C-228ENST00000492150 DOPEY1Q5JWR5 2465 aa12.85□□□□□ -0.35
CACNA1C-228ENST00000492150 MUC22E2RYF6 1773 aaPredicted RBP12.85□□□□□ -0.35
CACNA1C-228ENST00000492150 ARHGEF37A1IGU5 675 aa12.85□□□□□ -0.35
CACNA1C-228ENST00000492150 I3L4J1 428 aa12.85□□□□□ -0.35
CACNA1C-228ENST00000492150 ACKR2O00590 384 aa12.85□□□□□ -0.35
CACNA1C-228ENST00000492150 ZNF197O14709 1029 aa12.85□□□□□ -0.35
CACNA1C-228ENST00000492150 DCLK1O15075 740 aa12.85□□□□□ -0.35
CACNA1C-228ENST00000492150 EPB41L2O43491 1005 aaKnown RBP12.85□□□□□ -0.35
CACNA1C-228ENST00000492150 PFKFB2O60825 505 aa12.85□□□□□ -0.35
CACNA1C-228ENST00000492150 B3GAT3O94766 335 aa12.85□□□□□ -0.35
CACNA1C-228ENST00000492150 PRKCBP05771 671 aa12.85□□□□□ -0.35
CACNA1C-228ENST00000492150 FTH1P19P0C7X4 201 aa12.85□□□□□ -0.35
CACNA1C-228ENST00000492150 FDPSP14324 419 aaKnown RBP12.85□□□□□ -0.35
CACNA1C-228ENST00000492150 PTPN2P17706 415 aa12.85□□□□□ -0.35
CACNA1C-228ENST00000492150 KRT2P35908 639 aa12.85□□□□□ -0.35
CACNA1C-228ENST00000492150 SOX9P48436 509 aa12.85□□□□□ -0.35
CACNA1C-228ENST00000492150 CLCNKBP51801 687 aa12.85□□□□□ -0.35
CACNA1C-228ENST00000492150 FCHO2Q0JRZ9 810 aa12.85□□□□□ -0.35
CACNA1C-228ENST00000492150 PRPF4BQ13523 1007 aaKnown RBP12.85□□□□□ -0.35
CACNA1C-228ENST00000492150 PON2Q15165 354 aa12.85□□□□□ -0.35
CACNA1C-228ENST00000492150 GLRA4Q5JXX5 417 aa12.85□□□□□ -0.35
CACNA1C-228ENST00000492150 C3orf58Q8NDZ4 430 aa12.85□□□□□ -0.35
CACNA1C-228ENST00000492150 MCPH1Q8NEM0 835 aa12.85□□□□□ -0.35
CACNA1C-228ENST00000492150 PIP4K2CQ8TBX8 421 aa12.85□□□□□ -0.35
CACNA1C-228ENST00000492150 TCEAL4Q96EI5 215 aa12.85□□□□□ -0.35
CACNA1C-228ENST00000492150 C2orf40Q9H1Z8 148 aa12.85□□□□□ -0.35
CACNA1C-228ENST00000492150 ORC3Q9UBD5 711 aaPredicted RBP12.85□□□□□ -0.35
CACNA1C-228ENST00000492150 TPCN1Q9ULQ1 816 aa12.85□□□□□ -0.35
CACNA1C-228ENST00000492150 ATMQ13315 3056 aa12.85□□□□□ -0.35
CACNA1C-228ENST00000492150 ABLIM3O94929 683 aa12.84□□□□□ -0.35
CACNA1C-228ENST00000492150 ATP2B1P20020 1258 aa12.84□□□□□ -0.35
CACNA1C-228ENST00000492150 GBP1P32455 592 aa12.84□□□□□ -0.35
CACNA1C-228ENST00000492150 MAPK8P45983 427 aa12.84□□□□□ -0.35
CACNA1C-228ENST00000492150 BRCC3P46736 316 aa12.84□□□□□ -0.35
CACNA1C-228ENST00000492150 MAPK6Q16659 721 aa12.84□□□□□ -0.35
CACNA1C-228ENST00000492150 UPP1Q16831 310 aa12.84□□□□□ -0.35
CACNA1C-228ENST00000492150 TMEM132AQ24JP5 1023 aa12.84□□□□□ -0.35
CACNA1C-228ENST00000492150 NT5DC1Q5TFE4 455 aa12.84□□□□□ -0.35
CACNA1C-228ENST00000492150 SLC23A3Q6PIS1 610 aa12.84□□□□□ -0.35
CACNA1C-228ENST00000492150 PCSK4Q6UW60 755 aa12.84□□□□□ -0.35
CACNA1C-228ENST00000492150 ANKS3Q6ZW76 656 aa12.84□□□□□ -0.35
CACNA1C-228ENST00000492150 CATSPER3Q86XQ3 398 aa12.84□□□□□ -0.35
CACNA1C-228ENST00000492150 ADPGKQ9BRR6 497 aa12.84□□□□□ -0.35
CACNA1C-228ENST00000492150 TMEM60Q9H2L4 133 aa12.84□□□□□ -0.35
CACNA1C-228ENST00000492150 GOLGA2P5Q9HBQ8 144 aa12.84□□□□□ -0.35
CACNA1C-228ENST00000492150 NCANO14594 1321 aa12.84□□□□□ -0.35
CACNA1C-228ENST00000492150 ADAMTS9Q9P2N4 1935 aa12.84□□□□□ -0.35
CACNA1C-228ENST00000492150 PCDH15Q96QU1 1955 aa12.83□□□□□ -0.35
CACNA1C-228ENST00000492150 COL5A1P20908 1838 aaPredicted RBP12.83□□□□□ -0.35
CACNA1C-228ENST00000492150 HEPACAM2A8MVW5 462 aa12.83□□□□□ -0.36
CACNA1C-228ENST00000492150 NEMFO60524 1076 aa12.83□□□□□ -0.36
CACNA1C-228ENST00000492150 MED24O75448 989 aa12.83□□□□□ -0.36
CACNA1C-228ENST00000492150 LIG1P18858 919 aa12.83□□□□□ -0.36
CACNA1C-228ENST00000492150 CCR2P41597 374 aa12.83□□□□□ -0.36
CACNA1C-228ENST00000492150 DPP6P42658 865 aa12.83□□□□□ -0.36
CACNA1C-228ENST00000492150 CSRP3P50461 194 aa12.83□□□□□ -0.36
CACNA1C-228ENST00000492150 ROR1Q01973 937 aa12.83□□□□□ -0.36
CACNA1C-228ENST00000492150 SOX4Q06945 474 aaPredicted RBP12.83□□□□□ -0.36
CACNA1C-228ENST00000492150 CYP4F3Q08477 520 aa12.83□□□□□ -0.36
CACNA1C-228ENST00000492150 TRIP6Q15654 476 aaKnown RBP12.83□□□□□ -0.36
CACNA1C-228ENST00000492150 DCAF4L1Q3SXM0 396 aa12.83□□□□□ -0.36
CACNA1C-228ENST00000492150 SLC8B1Q6J4K2 584 aa12.83□□□□□ -0.36
CACNA1C-228ENST00000492150 TMPRSS7Q7RTY8 843 aa12.83□□□□□ -0.36
CACNA1C-228ENST00000492150 FAM181AQ8N9Y4 354 aa12.83□□□□□ -0.36
CACNA1C-228ENST00000492150 ZNF461Q8TAF7 563 aa12.83□□□□□ -0.36
CACNA1C-228ENST00000492150 WBP1Q96G27 269 aa12.83□□□□□ -0.36
CACNA1C-228ENST00000492150 CORO1BQ9BR76 489 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms