RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 CUEDC2Q9H467 287 aa10.54□□□□□ -0.72
TMEM39A-210ENST00000490099 MRPL44Q9H9J2 332 aaKnown RBP10.54□□□□□ -0.72
TMEM39A-210ENST00000490099 TRPV4Q9HBA0 871 aa10.54□□□□□ -0.72
TMEM39A-210ENST00000490099 TFIP11Q9UBB9 837 aaKnown RBP10.54□□□□□ -0.72
TMEM39A-210ENST00000490099 FBXL21Q9UKT6 434 aa10.54□□□□□ -0.72
TMEM39A-210ENST00000490099 POLIQ9UNA4 740 aa10.54□□□□□ -0.72
TMEM39A-210ENST00000490099 MRPS23Q9Y3D9 190 aaKnown RBP10.54□□□□□ -0.72
TMEM39A-210ENST00000490099 TIMM13Q9Y5L4 95 aaPredicted RBP10.54□□□□□ -0.72
TMEM39A-210ENST00000490099 SHISA7A6NL88 538 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 H0Y858 1186 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 PRRG1O14668 218 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 ZNF197O14709 1029 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 CUTAO60888 179 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 LRG1P02750 347 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 FCARP24071 287 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 HOXD13P35453 343 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 NBL1P41271 181 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 STAT6P42226 847 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 ARPP19P56211 112 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 WNT7BP56706 349 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 EHHADHQ08426 723 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 ADCY1Q08828 1119 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 ATL3Q6DD88 541 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 OVOS1Q6IE37 1185 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 SHC4Q6S5L8 630 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 EFCAB13Q8IY85 973 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 DTWD2Q8NBA8 298 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 LEMD2Q8NC56 503 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 FLCNQ8NFG4 579 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 ELSPBP1Q96BH3 223 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 TCEAL4Q96EI5 215 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 ZNF396Q96N95 335 aaPredicted RBP10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 ACCSQ96QU6 501 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 FGFBP2Q9BYJ0 223 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 PLA2G2FQ9BZM2 168 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 DNAJC25Q9H1X3 360 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 TNMDQ9H2S6 317 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 ARHGEF3Q9NR81 526 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 PANK4Q9NVE7 773 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 DPP3Q9NY33 737 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 EXOC7Q9UPT5 735 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 FAM186AA6NE01 2351 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 SCN1AP35498 2009 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 ANK1P16157 1881 aa10.53□□□□□ -0.72
TMEM39A-210ENST00000490099 IL18RAPO95256 599 aa10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 ZSCAN22P10073 491 aaPredicted RBP10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 ODC1P11926 461 aa10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 CEBPBP17676 345 aa10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 TWF1Q12792 350 aa10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 DUSP4Q13115 394 aa10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 STK38Q15208 465 aa10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 FAM78AQ5JUQ0 283 aa10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 TANGO2Q6ICL3 276 aa10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 DSTYKQ6XUX3 929 aa10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 EPM2AIP1Q7L775 607 aaPredicted RBP10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 USP37Q86T82 979 aa10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 TMC8Q8IU68 726 aa10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 BRSK2Q8IWQ3 736 aa10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 ZNF687Q8N1G0 1237 aa10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 ZSWIM2Q8NEG5 633 aa10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 ST13P5Q8NFI4 369 aaPredicted RBP10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 OR10T2Q8NGX3 314 aa10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 POMGNT1Q8WZA1 660 aa10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 SHDQ96IW2 340 aa10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 ZNF512Q96ME7 567 aaPredicted RBP10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 ZSWIM3Q96MP5 696 aa10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 ASB16Q96NS5 453 aa10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 C7orf25Q9BPX7 421 aa10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 CORO1BQ9BR76 489 aa10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 OSBPL6Q9BZF3 934 aa10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 TRIM9Q9C026 710 aa10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 ZCWPW1Q9H0M4 648 aa10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 TMEM206Q9H813 350 aa10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 TBC1D17Q9HA65 648 aa10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 TRPV5Q9NQA5 729 aa10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 TBC1D7Q9P0N9 293 aa10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 RCOR1Q9UKL0 485 aa10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 DSEQ9UL01 958 aa10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 CACNA1IQ9P0X4 2223 aa10.52□□□□□ -0.73
TMEM39A-210ENST00000490099 MTMR11A4FU01 709 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 CYB561D2O14569 222 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 KIAA0391O15091 583 aaKnown RBP10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 EXTL3O43909 919 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 GCNT3O95395 438 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 LDHAP00338 332 aaKnown RBP10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 OR4Q2P0C623 313 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 GLULP15104 373 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 PFKPQ01813 784 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 PRKCQQ04759 706 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 SLC44A4Q53GD3 710 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 CYP4A22Q5TCH4 519 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 SCARA3Q6AZY7 606 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 IQCEQ6IPM2 695 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 LIMS2Q7Z4I7 341 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 LRRTM3Q86VH5 581 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 CCDC65Q8IXS2 484 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 PDILTQ8N807 584 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 IQUBQ8NA54 791 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 ATAD1Q8NBU5 361 aa10.51□□□□□ -0.73
TMEM39A-210ENST00000490099 GLIS3Q8NEA6 775 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms