RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 CTSSP25774 331 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 AK2P54819 239 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 SCAND1P57086 179 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 BIRC3Q13489 604 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 KRT72Q14CN4 511 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 PTPAQ15257 358 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 PUM3Q15397 648 aaKnown RBP3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 TIGD2Q4W5G0 525 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 LY6G5CQ5SRR4 150 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 HYIQ5T013 277 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 PPP4R3AQ6IN85 833 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 CFAP161Q6P656 301 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 KCNV1Q6PIU1 500 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 C1orf122Q6ZSJ8 110 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 SYT12Q8IV01 421 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 DRC7Q8IY82 874 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 ZNF366Q8N895 744 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 MDM1Q8TC05 714 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 RSAD2Q8WXG1 361 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 NELL1Q92832 810 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 SERINC2Q96SA4 455 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 TBCBQ99426 244 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 PCGF6Q9BYE7 350 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 BHMT2Q9H2M3 363 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 POLG2Q9UHN1 485 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 SERPINB13Q9UIV8 391 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 HS3ST4Q9Y661 456 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 CFTRP13569 1480 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 CENPVL1A0A0U1RR11 272 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 PRR5-ARHGAP8B1AHC4 643 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 EYA2O00167 538 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 ERC2O15083 957 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 XPOTO43592 962 aaKnown RBP3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 CTNND1O60716 968 aaKnown RBP3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 CBSLP0DN79 551 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 LAG3P18627 525 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 CBSP35520 551 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 COPB2P35606 906 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 UGT8Q16880 541 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 ALDH1L2Q3SY69 923 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 C19orf54Q5BKX5 351 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 RRP12Q5JTH9 1297 aaKnown RBP3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 IFIT1BQ5T764 474 aaKnown RBP3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 FAM180BQ6P0A1 224 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 MZT2AQ6P582 158 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 GET4Q7L5D6 327 aaPredicted RBP3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 RD3Q7Z3Z2 195 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 IL17REQ8NFR9 667 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 NSUN6Q8TEA1 469 aaKnown RBP3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 KIAA1191Q96A73 305 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 CEP95Q96GE4 821 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 TNIP3Q96KP6 325 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 TEKT5Q96M29 485 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 MYD88Q99836 296 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 TEX101Q9BY14 249 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 GTPBP4Q9BZE4 634 aaKnown RBP3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 VPS45Q9NRW7 570 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 RRN3Q9NYV6 651 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 GPRC5DQ9NZD1 345 aa3.81□□□□□ -1.8
DEPDC1-204ENST00000489862 COL4A3Q01955 1670 aa3.8□□□□□ -1.8
DEPDC1-204ENST00000489862 M0R3H8 397 aa3.8□□□□□ -1.8
DEPDC1-204ENST00000489862 ZNF185O15231 689 aa3.8□□□□□ -1.8
DEPDC1-204ENST00000489862 ADCY6O43306 1168 aa3.8□□□□□ -1.8
DEPDC1-204ENST00000489862 NCR1O76036 304 aa3.8□□□□□ -1.8
DEPDC1-204ENST00000489862 MAPK9P45984 424 aa3.8□□□□□ -1.8
DEPDC1-204ENST00000489862 GPR3P46089 330 aa3.8□□□□□ -1.8
DEPDC1-204ENST00000489862 RNASE9P60153 205 aaKnown RBP3.8□□□□□ -1.8
DEPDC1-204ENST00000489862 ZBED6P86452 979 aa3.8□□□□□ -1.8
DEPDC1-204ENST00000489862 CDK17Q00537 523 aa3.8□□□□□ -1.8
DEPDC1-204ENST00000489862 MEF2AQ02078 507 aaPredicted RBP3.8□□□□□ -1.8
DEPDC1-204ENST00000489862 NHLH2Q02577 135 aa3.8□□□□□ -1.8
DEPDC1-204ENST00000489862 FSCN1Q16658 493 aaKnown RBP3.8□□□□□ -1.8
DEPDC1-204ENST00000489862 NBPF8Q3BBV2 869 aa3.8□□□□□ -1.8
DEPDC1-204ENST00000489862 DACT2Q5SW24 774 aa3.8□□□□□ -1.8
DEPDC1-204ENST00000489862 SWSAP1Q6NVH7 229 aa3.8□□□□□ -1.8
DEPDC1-204ENST00000489862 BTNL9Q6UXG8 535 aa3.8□□□□□ -1.8
DEPDC1-204ENST00000489862 RINLQ6ZS11 566 aa3.8□□□□□ -1.8
DEPDC1-204ENST00000489862 GDF7Q7Z4P5 450 aa3.8□□□□□ -1.8
DEPDC1-204ENST00000489862 CREBRFQ8IUR6 639 aa3.8□□□□□ -1.8
DEPDC1-204ENST00000489862 FAM43AQ8N2R8 423 aa3.8□□□□□ -1.8
DEPDC1-204ENST00000489862 RNF169Q8NCN4 708 aa3.8□□□□□ -1.8
DEPDC1-204ENST00000489862 TTC17Q96AE7 1141 aa3.8□□□□□ -1.8
DEPDC1-204ENST00000489862 SLC46A2Q9BY10 475 aa3.8□□□□□ -1.8
DEPDC1-204ENST00000489862 WDR12Q9GZL7 423 aaKnown RBP3.8□□□□□ -1.8
DEPDC1-204ENST00000489862 TRMT13Q9NUP7 481 aaKnown RBP3.8□□□□□ -1.8
DEPDC1-204ENST00000489862 ANKFY1Q9P2R3 1169 aa3.8□□□□□ -1.8
DEPDC1-204ENST00000489862 DPP7Q9UHL4 492 aa3.8□□□□□ -1.8
DEPDC1-204ENST00000489862 ASAP1Q9ULH1 1129 aa3.8□□□□□ -1.8
DEPDC1-204ENST00000489862 CHST2Q9Y4C5 530 aa3.8□□□□□ -1.8
DEPDC1-204ENST00000489862 GRID2IPA4D2P6 1211 aa3.79□□□□□ -1.8
DEPDC1-204ENST00000489862 TBKBP1A7MCY6 615 aa3.79□□□□□ -1.8
DEPDC1-204ENST00000489862 TISP43B9A030 160 aa3.79□□□□□ -1.8
DEPDC1-204ENST00000489862 B9A039 149 aa3.79□□□□□ -1.8
DEPDC1-204ENST00000489862 TCERG1O14776 1098 aaKnown RBP3.79□□□□□ -1.8
DEPDC1-204ENST00000489862 ADSLP30566 484 aaPredicted RBP3.79□□□□□ -1.8
DEPDC1-204ENST00000489862 RXRGP48443 463 aa3.79□□□□□ -1.8
DEPDC1-204ENST00000489862 PRIM2P49643 509 aa3.79□□□□□ -1.8
DEPDC1-204ENST00000489862 CCT2P78371 535 aaKnown RBP3.79□□□□□ -1.8
DEPDC1-204ENST00000489862 MFSD14BQ5SR56 506 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms