RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 LOC102724159A0A0B4J2E5 919 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 SPDYE5A6NIY4 337 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 NOP56O00567 594 aaKnown RBP10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 OGTO15294 1046 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 CLDN3O15551 220 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 PSTPIP1O43586 416 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 ZEB2O60315 1214 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 LGR5O75473 907 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 TOM1L1O75674 476 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 PROSCO94903 275 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 ECEL1O95672 775 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 PRKCBP05771 671 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 RRM1P23921 792 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 ATP1A2P50993 1020 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 PMS2P54278 862 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 YWHAEP62258 255 aaKnown RBP10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 NOMO3P69849 1222 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 SH3BP2P78314 561 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 FSTL1Q12841 308 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 PTP4A2Q12974 167 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 PPIL2Q13356 520 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 NCOA4Q13772 614 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 TFDP1Q14186 410 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 MXD4Q14582 209 aaPredicted RBP10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 PWP2Q15269 919 aaKnown RBP10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 PPP1R7Q15435 360 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 PTPRNQ16849 979 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 KRT71Q3SY84 523 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 SGO2Q562F6 1265 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 DENND2CQ68D51 928 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 SPOPLQ6IQ16 392 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 AADACL2Q6P093 401 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 TTC27Q6P3X3 843 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 ZDHHC24Q6UX98 284 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 SYDE1Q6ZW31 735 aaPredicted RBP10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 MON1BQ7L1V2 547 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 ERO1BQ86YB8 467 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 PHF13Q86YI8 300 aaPredicted RBP10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 CCDC105Q8IYK2 499 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 ABRAQ8N0Z2 381 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 GRK7Q8WTQ7 553 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 GLG1Q92896 1179 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 C18orf8Q96DM3 657 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 VCPIP1Q96JH7 1222 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 ZBTB45Q96K62 511 aaPredicted RBP10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 FAM84AQ96KN4 292 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 TXLNGYQ9BZA5 131 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 CCDC113Q9H0I3 377 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 TSPYL1Q9H0U9 437 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 ASCC2Q9H1I8 757 aaPredicted RBP10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 CENPHQ9H3R5 247 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 APOBEC3GQ9HC16 384 aaKnown RBP10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 MRPL47Q9HD33 250 aaKnown RBP10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 RSPH14Q9UHP6 348 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 AGTPBP1Q9UPW5 1226 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 CNTN6Q9UQ52 1028 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 SNX24Q9Y343 169 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 RRP15Q9Y3B9 282 aaKnown RBP10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 WASF2Q9Y6W5 498 aa10.18□□□□□ -0.78
RAB3GAP1-205ENST00000489858 MYO1FO00160 1098 aa10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 THAP12O43422 761 aa10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 CNMDO75829 334 aa10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 LSM8O95777 96 aaKnown RBP10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 CALCAP01258 141 aa10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 NUDT17P0C025 328 aa10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 RARAP10276 462 aa10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 SSTR3P32745 418 aaPredicted RBP10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 FLT3P36888 993 aa10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 CETN2P41208 172 aa10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 RPL21P46778 160 aaKnown RBP10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 ZNF132P52740 706 aa10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 PLTPP55058 493 aa10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 SLMAPQ14BN4 828 aa10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 SIX1Q15475 284 aaPredicted RBP10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 ZBTB41Q5SVQ8 909 aa10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 TMEM270Q6UE05 265 aa10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 SRLQ86TD4 932 aa10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 CPNE8Q86YQ8 564 aa10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 ANKRD13AQ8IZ07 590 aa10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 UBR7Q8N806 425 aa10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 OR2W6PQ8NHA6 318 aa10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 PRPF31Q8WWY3 499 aaKnown RBP10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 CPA5Q8WXQ8 436 aa10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 SLCO2A1Q92959 643 aa10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 ELMO3Q96BJ8 720 aa10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 MMP19Q99542 508 aa10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 C11orf70Q9BRQ4 267 aa10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 NIF3L1Q9GZT8 377 aa10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 LRRC19Q9H756 370 aa10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 EVA1BQ9NVM1 165 aa10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 GRHL1Q9NZI5 618 aa10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 ADAM22Q9P0K1 906 aa10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 ATP8A1Q9Y2Q0 1164 aa10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 POLR2AP24928 1970 aaKnown RBP10.17□□□□□ -0.78
RAB3GAP1-205ENST00000489858 UMODL1Q5DID0 1318 aa10.16□□□□□ -0.78
RAB3GAP1-205ENST00000489858 EBAG9O00559 213 aa10.16□□□□□ -0.78
RAB3GAP1-205ENST00000489858 FSCN2O14926 492 aa10.16□□□□□ -0.78
RAB3GAP1-205ENST00000489858 CAPN5O15484 640 aaPredicted RBP10.16□□□□□ -0.78
RAB3GAP1-205ENST00000489858 GAS8O95995 478 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms