RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 HOXC10Q9NYD6 342 aa16.66■□□□□ 0.26
BRD9-208ENST00000489816 POLIQ9UNA4 740 aa16.66■□□□□ 0.26
BRD9-208ENST00000489816 TTC4O95801 387 aa16.65■□□□□ 0.26
BRD9-208ENST00000489816 AGTP01019 485 aa16.65■□□□□ 0.26
BRD9-208ENST00000489816 GAD2Q05329 585 aa16.65■□□□□ 0.26
BRD9-208ENST00000489816 TCEAL1Q15170 157 aa16.65■□□□□ 0.26
BRD9-208ENST00000489816 CDHR1Q96JP9 859 aa16.65■□□□□ 0.26
BRD9-208ENST00000489816 SENP7Q9BQF6 1050 aa16.65■□□□□ 0.26
BRD9-208ENST00000489816 SLC40A1Q9NP59 571 aa16.65■□□□□ 0.26
BRD9-208ENST00000489816 RNF19AQ9NV58 838 aa16.65■□□□□ 0.26
BRD9-208ENST00000489816 ARIH2O95376 493 aa16.65■□□□□ 0.26
BRD9-208ENST00000489816 NFX1Q12986 1120 aaKnown RBP16.65■□□□□ 0.26
BRD9-208ENST00000489816 TMED2Q15363 201 aa16.65■□□□□ 0.26
BRD9-208ENST00000489816 ANKRD20A8PQ5CZ79 823 aa16.65■□□□□ 0.26
BRD9-208ENST00000489816 ENOSF1Q7L5Y1 443 aa16.65■□□□□ 0.26
BRD9-208ENST00000489816 RBM15Q96T37 977 aaKnown RBP eCLIP16.65■□□□□ 0.262e-8■□□□□ 9.1
BRD9-208ENST00000489816 SAYSD1Q9NPB0 183 aa16.65■□□□□ 0.26
BRD9-208ENST00000489816 ABCF3Q9NUQ8 709 aa16.65■□□□□ 0.26
BRD9-208ENST00000489816 PCSK1NQ9UHG2 260 aa16.65■□□□□ 0.26
BRD9-208ENST00000489816 MAFBQ9Y5Q3 323 aaPredicted RBP16.65■□□□□ 0.26
BRD9-208ENST00000489816 CNTNAP2Q9UHC6 1331 aa16.65■□□□□ 0.26
BRD9-208ENST00000489816 ITIH2P19823 946 aa16.65■□□□□ 0.26
BRD9-208ENST00000489816 BAG6P46379 1132 aa16.65■□□□□ 0.26
BRD9-208ENST00000489816 SCTRP47872 440 aa16.65■□□□□ 0.26
BRD9-208ENST00000489816 BPIFB4P59827 614 aa16.65■□□□□ 0.26
BRD9-208ENST00000489816 GPS1Q13098 491 aa16.65■□□□□ 0.26
BRD9-208ENST00000489816 FEZF2Q8TBJ5 459 aa16.65■□□□□ 0.26
BRD9-208ENST00000489816 LRRN4Q8WUT4 740 aa16.65■□□□□ 0.26
BRD9-208ENST00000489816 TMEM174Q8WUU8 243 aa16.65■□□□□ 0.26
BRD9-208ENST00000489816 CISHQ9NSE2 258 aa16.65■□□□□ 0.26
BRD9-208ENST00000489816 POTEJP0CG39 1038 aa16.64■□□□□ 0.25
BRD9-208ENST00000489816 NAMPTP43490 491 aa16.64■□□□□ 0.25
BRD9-208ENST00000489816 GTF2A1P52655 376 aaPredicted RBP16.64■□□□□ 0.25
BRD9-208ENST00000489816 TRPC3Q13507 836 aa16.64■□□□□ 0.25
BRD9-208ENST00000489816 ICE2Q659A1 982 aa16.64■□□□□ 0.25
BRD9-208ENST00000489816 ANKMY2Q8IV38 441 aa16.64■□□□□ 0.25
BRD9-208ENST00000489816 NAALADL1Q9UQQ1 740 aa16.64■□□□□ 0.25
BRD9-208ENST00000489816 FARP2O94887 1054 aaPredicted RBP16.64■□□□□ 0.25
BRD9-208ENST00000489816 ITGBL1O95965 494 aaPredicted RBP16.64■□□□□ 0.25
BRD9-208ENST00000489816 CPP00450 1065 aa16.64■□□□□ 0.25
BRD9-208ENST00000489816 ARL2P36404 184 aa16.64■□□□□ 0.25
BRD9-208ENST00000489816 ALDH5A1P51649 535 aaPredicted RBP16.64■□□□□ 0.25
BRD9-208ENST00000489816 ARSEP51690 589 aa16.64■□□□□ 0.25
BRD9-208ENST00000489816 ZNF252P-AS1Q0IIN9 211 aa16.64■□□□□ 0.25
BRD9-208ENST00000489816 OTUD5Q96G74 571 aa16.64■□□□□ 0.25
BRD9-208ENST00000489816 SAMD15Q9P1V8 674 aa16.64■□□□□ 0.25
BRD9-208ENST00000489816 WHRNQ9P202 907 aa16.64■□□□□ 0.25
BRD9-208ENST00000489816 SOWAHBA6NEL2 793 aa16.63■□□□□ 0.25
BRD9-208ENST00000489816 FSBPO95073 299 aa16.63■□□□□ 0.25
BRD9-208ENST00000489816 MAP3K6O95382 1288 aa16.63■□□□□ 0.25
BRD9-208ENST00000489816 PAEPP09466 180 aa16.63■□□□□ 0.25
BRD9-208ENST00000489816 VGLL4Q14135 290 aa16.63■□□□□ 0.25
BRD9-208ENST00000489816 DNAJC24Q6P3W2 148 aa16.63■□□□□ 0.25
BRD9-208ENST00000489816 RHBDF2Q6PJF5 856 aa16.63■□□□□ 0.25
BRD9-208ENST00000489816 CEP57Q86XR8 500 aa16.63■□□□□ 0.25
BRD9-208ENST00000489816 RUNDC3BQ96NL0 473 aa16.63■□□□□ 0.25
BRD9-208ENST00000489816 KAT6AQ92794 2004 aa16.63■□□□□ 0.25
BRD9-208ENST00000489816 WDR81Q562E7 1941 aa16.63■□□□□ 0.25
BRD9-208ENST00000489816 CLCN3P51790 818 aa16.63■□□□□ 0.25
BRD9-208ENST00000489816 TGFB2P61812 414 aa16.63■□□□□ 0.25
BRD9-208ENST00000489816 KLF1Q13351 362 aaPredicted RBP16.63■□□□□ 0.25
BRD9-208ENST00000489816 EEF1DP3Q658K8 133 aa16.63■□□□□ 0.25
BRD9-208ENST00000489816 XRRA1Q6P2D8 792 aa16.63■□□□□ 0.25
BRD9-208ENST00000489816 VSTM1Q6UX27 236 aa16.63■□□□□ 0.25
BRD9-208ENST00000489816 C12orf50Q8NA57 414 aaPredicted RBP16.63■□□□□ 0.25
BRD9-208ENST00000489816 SPOCK2Q92563 424 aa16.63■□□□□ 0.25
BRD9-208ENST00000489816 TRAIPQ9BWF2 469 aa16.63■□□□□ 0.25
BRD9-208ENST00000489816 MRPL47Q9HD33 250 aaKnown RBP16.63■□□□□ 0.25
BRD9-208ENST00000489816 AVENQ9NQS1 362 aaPredicted RBP16.63■□□□□ 0.25
BRD9-208ENST00000489816 SGK1O00141 431 aa16.63■□□□□ 0.25
BRD9-208ENST00000489816 NOP56O00567 594 aaKnown RBP16.63■□□□□ 0.25
BRD9-208ENST00000489816 PTP4A2Q12974 167 aa16.63■□□□□ 0.25
BRD9-208ENST00000489816 TAOK1Q7L7X3 1001 aa16.63■□□□□ 0.25
BRD9-208ENST00000489816 TBC1D1Q86TI0 1168 aaPredicted RBP16.63■□□□□ 0.25
BRD9-208ENST00000489816 PNMA8AQ86V59 439 aaPredicted RBP16.63■□□□□ 0.25
BRD9-208ENST00000489816 C4orf33Q8N1A6 199 aa16.63■□□□□ 0.25
BRD9-208ENST00000489816 TCP11Q8WWU5 503 aa16.63■□□□□ 0.25
BRD9-208ENST00000489816 CGRRF1Q99675 332 aa16.63■□□□□ 0.25
BRD9-208ENST00000489816 VPS37BQ9H9H4 285 aa16.63■□□□□ 0.25
BRD9-208ENST00000489816 KIAA1586Q9HCI6 787 aa16.63■□□□□ 0.25
BRD9-208ENST00000489816 PARVAQ9NVD7 372 aa16.63■□□□□ 0.25
BRD9-208ENST00000489816 LOXHD1Q8IVV2 1947 aa16.62■□□□□ 0.25
BRD9-208ENST00000489816 ADCY3O60266 1144 aa16.62■□□□□ 0.25
BRD9-208ENST00000489816 RFC1P35251 1148 aaPredicted RBP16.62■□□□□ 0.25
BRD9-208ENST00000489816 SLC1A1P43005 524 aa16.62■□□□□ 0.25
BRD9-208ENST00000489816 TAF5Q15542 800 aa16.62■□□□□ 0.25
BRD9-208ENST00000489816 WDR72Q3MJ13 1102 aa16.62■□□□□ 0.25
BRD9-208ENST00000489816 SLFN12LQ6IEE8 588 aa16.62■□□□□ 0.25
BRD9-208ENST00000489816 HIBCHQ6NVY1 386 aaPredicted RBP16.62■□□□□ 0.25
BRD9-208ENST00000489816 SPATS2Q86XZ4 545 aaKnown RBP16.62■□□□□ 0.25
BRD9-208ENST00000489816 CCT6BQ92526 530 aa16.62■□□□□ 0.25
BRD9-208ENST00000489816 KLC4Q9NSK0 619 aa16.62■□□□□ 0.25
BRD9-208ENST00000489816 ADAMTS5Q9UNA0 930 aa16.62■□□□□ 0.25
BRD9-208ENST00000489816 POLR2AP24928 1970 aaKnown RBP16.62■□□□□ 0.25
BRD9-208ENST00000489816 ZC3H11AO75152 810 aaKnown RBP eCLIP16.62■□□□□ 0.253e-6■□□□□ 10.7
BRD9-208ENST00000489816 PTK6Q13882 451 aa16.62■□□□□ 0.25
BRD9-208ENST00000489816 E2F5Q15329 346 aa16.62■□□□□ 0.25
BRD9-208ENST00000489816 TRMT10CQ7L0Y3 403 aaKnown RBP16.62■□□□□ 0.25
BRD9-208ENST00000489816 WDTC1Q8N5D0 677 aa16.62■□□□□ 0.25
BRD9-208ENST00000489816 JOSD2Q8TAC2 188 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms