RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 MTMR11A4FU01 709 aa12.78□□□□□ -0.36
ACTN4-206ENST00000489451 ZNF197O14709 1029 aa12.78□□□□□ -0.36
ACTN4-206ENST00000489451 OGTO15294 1046 aa12.78□□□□□ -0.36
ACTN4-206ENST00000489451 LAMTOR5O43504 91 aa12.78□□□□□ -0.36
ACTN4-206ENST00000489451 SOAT2O75908 522 aa12.78□□□□□ -0.36
ACTN4-206ENST00000489451 NFICP08651 508 aa12.78□□□□□ -0.36
ACTN4-206ENST00000489451 MYL4P12829 197 aa12.78□□□□□ -0.36
ACTN4-206ENST00000489451 CPB1P15086 417 aa12.78□□□□□ -0.36
ACTN4-206ENST00000489451 PLCG1P19174 1290 aa12.78□□□□□ -0.36
ACTN4-206ENST00000489451 RPS9P46781 194 aaKnown RBP12.78□□□□□ -0.36
ACTN4-206ENST00000489451 MCM2P49736 904 aa12.78□□□□□ -0.36
ACTN4-206ENST00000489451 CSTF1Q05048 431 aaKnown RBP12.78□□□□□ -0.36
ACTN4-206ENST00000489451 PPP2R3AQ06190 1150 aa12.78□□□□□ -0.36
ACTN4-206ENST00000489451 DUSP4Q13115 394 aa12.78□□□□□ -0.36
ACTN4-206ENST00000489451 MTAPQ13126 283 aa12.78□□□□□ -0.36
ACTN4-206ENST00000489451 GAS6Q14393 721 aa12.78□□□□□ -0.36
ACTN4-206ENST00000489451 MCM6Q14566 821 aa12.78□□□□□ -0.36
ACTN4-206ENST00000489451 KARSQ15046 597 aaKnown RBP12.78□□□□□ -0.36
ACTN4-206ENST00000489451 SPATA1Q5VX52 437 aa12.78□□□□□ -0.36
ACTN4-206ENST00000489451 JADE1Q6IE81 842 aa12.78□□□□□ -0.36
ACTN4-206ENST00000489451 OR10T2Q8NGX3 314 aa12.78□□□□□ -0.36
ACTN4-206ENST00000489451 ZSCAN18Q8TBC5 510 aaPredicted RBP12.78□□□□□ -0.36
ACTN4-206ENST00000489451 SMARCD2Q92925 531 aa12.78□□□□□ -0.36
ACTN4-206ENST00000489451 TRPV4Q9HBA0 871 aa12.78□□□□□ -0.36
ACTN4-206ENST00000489451 LARSQ9P2J5 1176 aaKnown RBP12.78□□□□□ -0.36
ACTN4-206ENST00000489451 MAFFQ9ULX9 164 aa12.78□□□□□ -0.36
ACTN4-206ENST00000489451 OBSL1O75147 1896 aa12.78□□□□□ -0.36
ACTN4-206ENST00000489451 DENND4CQ5VZ89 1909 aa12.78□□□□□ -0.36
ACTN4-206ENST00000489451 A0A1W2PRU2 124 aa12.77□□□□□ -0.37
ACTN4-206ENST00000489451 ANO9A1A5B4 782 aa12.77□□□□□ -0.37
ACTN4-206ENST00000489451 ANKRD63C9JTQ0 380 aa12.77□□□□□ -0.37
ACTN4-206ENST00000489451 K7ENM7 598 aa12.77□□□□□ -0.37
ACTN4-206ENST00000489451 HNRNPDLO14979 420 aaKnown RBP12.77□□□□□ -0.37
ACTN4-206ENST00000489451 NMT1P30419 496 aaKnown RBP12.77□□□□□ -0.37
ACTN4-206ENST00000489451 GDI1P31150 447 aa12.77□□□□□ -0.37
ACTN4-206ENST00000489451 MAGEA9P43362 315 aa12.77□□□□□ -0.37
ACTN4-206ENST00000489451 LIG4P49917 911 aa12.77□□□□□ -0.37
ACTN4-206ENST00000489451 CDR1P51861 262 aa12.77□□□□□ -0.37
ACTN4-206ENST00000489451 WNT7BP56706 349 aa12.77□□□□□ -0.37
ACTN4-206ENST00000489451 LILRA4P59901 499 aa12.77□□□□□ -0.37
ACTN4-206ENST00000489451 GPR17Q13304 367 aa12.77□□□□□ -0.37
ACTN4-206ENST00000489451 DHX8Q14562 1220 aaKnown RBP12.77□□□□□ -0.37
ACTN4-206ENST00000489451 SCARA3Q6AZY7 606 aa12.77□□□□□ -0.37
ACTN4-206ENST00000489451 CENPPQ6IPU0 288 aa12.77□□□□□ -0.37
ACTN4-206ENST00000489451 ZNF852Q6ZMS4 543 aa12.77□□□□□ -0.37
ACTN4-206ENST00000489451 USP49Q70CQ1 688 aa12.77□□□□□ -0.37
ACTN4-206ENST00000489451 GAREM2Q75VX8 874 aa12.77□□□□□ -0.37
ACTN4-206ENST00000489451 ATAD1Q8NBU5 361 aa12.77□□□□□ -0.37
ACTN4-206ENST00000489451 RAD54LQ92698 747 aa12.77□□□□□ -0.37
ACTN4-206ENST00000489451 BICD1Q96G01 975 aa12.77□□□□□ -0.37
ACTN4-206ENST00000489451 CDK5RAP3Q96JB5 506 aa12.77□□□□□ -0.37
ACTN4-206ENST00000489451 AK8Q96MA6 479 aa12.77□□□□□ -0.37
ACTN4-206ENST00000489451 ZNF512Q96ME7 567 aaPredicted RBP12.77□□□□□ -0.37
ACTN4-206ENST00000489451 TRMT61BQ9BVS5 477 aaKnown RBP12.77□□□□□ -0.37
ACTN4-206ENST00000489451 CHRDQ9H2X0 955 aa12.77□□□□□ -0.37
ACTN4-206ENST00000489451 BRD9Q9H8M2 597 aa12.77□□□□□ -0.37
ACTN4-206ENST00000489451 TRPV5Q9NQA5 729 aa12.77□□□□□ -0.37
ACTN4-206ENST00000489451 ASAH2Q9NR71 780 aa12.77□□□□□ -0.37
ACTN4-206ENST00000489451 NDRG2Q9UN36 371 aaKnown RBP12.77□□□□□ -0.37
ACTN4-206ENST00000489451 SLC27A5Q9Y2P5 690 aa12.77□□□□□ -0.37
ACTN4-206ENST00000489451 TCHHQ07283 1943 aa12.77□□□□□ -0.37
ACTN4-206ENST00000489451 HEPACAM2A8MVW5 462 aa12.76□□□□□ -0.37
ACTN4-206ENST00000489451 PRR5-ARHGAP8B1AHC4 643 aa12.76□□□□□ -0.37
ACTN4-206ENST00000489451 PIRO00625 290 aa12.76□□□□□ -0.37
ACTN4-206ENST00000489451 SLC26A4O43511 780 aa12.76□□□□□ -0.37
ACTN4-206ENST00000489451 TRAK2O60296 914 aa12.76□□□□□ -0.37
ACTN4-206ENST00000489451 KINO60870 393 aaKnown RBP12.76□□□□□ -0.37
ACTN4-206ENST00000489451 PSMC3P17980 439 aa12.76□□□□□ -0.37
ACTN4-206ENST00000489451 TYMPP19971 482 aa12.76□□□□□ -0.37
ACTN4-206ENST00000489451 TGM1P22735 817 aa12.76□□□□□ -0.37
ACTN4-206ENST00000489451 HOXC13P31276 330 aa12.76□□□□□ -0.37
ACTN4-206ENST00000489451 MATR3P43243 847 aaKnown RBP eCLIP12.76□□□□□ -0.37
ACTN4-206ENST00000489451 ARHGAP8P85298 464 aa12.76□□□□□ -0.37
ACTN4-206ENST00000489451 GTF2BQ00403 316 aa12.76□□□□□ -0.37
ACTN4-206ENST00000489451 LMNB2Q03252 620 aa12.76□□□□□ -0.37
ACTN4-206ENST00000489451 ZC2HC1CQ53FD0 456 aaPredicted RBP12.76□□□□□ -0.37
ACTN4-206ENST00000489451 CYP4A22Q5TCH4 519 aa12.76□□□□□ -0.37
ACTN4-206ENST00000489451 C9orf57Q5W0N0 161 aa12.76□□□□□ -0.37
ACTN4-206ENST00000489451 IQCEQ6IPM2 695 aa12.76□□□□□ -0.37
ACTN4-206ENST00000489451 CRELD2Q6UXH1 353 aaPredicted RBP12.76□□□□□ -0.37
ACTN4-206ENST00000489451 GPIHBP1Q8IV16 184 aa12.76□□□□□ -0.37
ACTN4-206ENST00000489451 MYCT1Q8N699 235 aa12.76□□□□□ -0.37
ACTN4-206ENST00000489451 GPR161Q8N6U8 529 aaKnown RBP12.76□□□□□ -0.37
ACTN4-206ENST00000489451 DEPDC1BQ8WUY9 529 aa12.76□□□□□ -0.37
ACTN4-206ENST00000489451 BORCS6Q96GS4 357 aa12.76□□□□□ -0.37
ACTN4-206ENST00000489451 SENP8Q96LD8 212 aa12.76□□□□□ -0.37
ACTN4-206ENST00000489451 NELL2Q99435 816 aa12.76□□□□□ -0.37
ACTN4-206ENST00000489451 MSTO1Q9BUK6 570 aa12.76□□□□□ -0.37
ACTN4-206ENST00000489451 EPC1Q9H2F5 836 aa12.76□□□□□ -0.37
ACTN4-206ENST00000489451 RPF1Q9H9Y2 349 aaKnown RBP12.76□□□□□ -0.37
ACTN4-206ENST00000489451 PARVGQ9HBI0 331 aa12.76□□□□□ -0.37
ACTN4-206ENST00000489451 ZSCAN32Q9NX65 697 aa12.76□□□□□ -0.37
ACTN4-206ENST00000489451 KCNG1Q9UIX4 513 aa12.76□□□□□ -0.37
ACTN4-206ENST00000489451 PCDHGA2Q9Y5H1 932 aa12.76□□□□□ -0.37
ACTN4-206ENST00000489451 PIAS3Q9Y6X2 628 aa12.76□□□□□ -0.37
ACTN4-206ENST00000489451 OR6C75A6NL08 312 aa12.75□□□□□ -0.37
ACTN4-206ENST00000489451 SOBPA7XYQ1 873 aa12.75□□□□□ -0.37
ACTN4-206ENST00000489451 H0YCG3 227 aa12.75□□□□□ -0.37
ACTN4-206ENST00000489451 H3BQV1 296 aa12.75□□□□□ -0.37
ACTN4-206ENST00000489451 PPP1R37O75864 691 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms