RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 MFSD14BQ5SR56 506 aa5.25□□□□□ -1.57
XRN1-213ENST00000489241 ZGPATQ8N5A5 531 aaKnown RBP5.25□□□□□ -1.57
XRN1-213ENST00000489241 MDGA1Q8NFP4 955 aa5.25□□□□□ -1.57
XRN1-213ENST00000489241 KIAA1191Q96A73 305 aa5.25□□□□□ -1.57
XRN1-213ENST00000489241 MTFMTQ96DP5 389 aaKnown RBP5.25□□□□□ -1.57
XRN1-213ENST00000489241 CEP95Q96GE4 821 aa5.25□□□□□ -1.57
XRN1-213ENST00000489241 PRDM16Q9HAZ2 1276 aa5.25□□□□□ -1.57
XRN1-213ENST00000489241 ARFGAP3Q9NP61 516 aa5.25□□□□□ -1.57
XRN1-213ENST00000489241 GPRC5BQ9NZH0 403 aa5.25□□□□□ -1.57
XRN1-213ENST00000489241 LUZP4Q9P127 313 aa5.25□□□□□ -1.57
XRN1-213ENST00000489241 SNX13Q9Y5W8 968 aa5.25□□□□□ -1.57
XRN1-213ENST00000489241 MORC2Q9Y6X9 1032 aaPredicted RBP5.25□□□□□ -1.57
XRN1-213ENST00000489241 A0A1W2PPL8 197 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 CXorf49A8MYA2 514 aaPredicted RBP5.24□□□□□ -1.57
XRN1-213ENST00000489241 NT5C1B-RDH14C9J2C7 533 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 SH3BP5O60239 455 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 KITP10721 976 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 NPR1P16066 1061 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 RPL17P18621 184 aaKnown RBP5.24□□□□□ -1.57
XRN1-213ENST00000489241 ATP5JP18859 108 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 ABCB4P21439 1286 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 MGAT1P26572 445 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 SLC7A1P30825 629 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 PPM1AP35813 382 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 STT3AP46977 705 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 CTXN1P60606 82 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 ATP8B2P98198 1209 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 FMO1Q01740 532 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 MTM1Q13496 603 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 TRIM14Q14142 442 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 CNGA2Q16280 664 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 BMT2Q1RMZ1 405 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 FAM214AQ32MH5 1076 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 IZUMO3Q5VZ72 239 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 AFMIDQ63HM1 303 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 OTUD7BQ6GQQ9 843 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 EFCAB12Q6NXP0 572 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 MYLK4Q86YV6 388 aaPredicted RBP5.24□□□□□ -1.57
XRN1-213ENST00000489241 ELOA2Q8IYF1 753 aaPredicted RBP5.24□□□□□ -1.57
XRN1-213ENST00000489241 NKAPQ8N5F7 415 aaKnown RBP5.24□□□□□ -1.57
XRN1-213ENST00000489241 CELF5Q8N6W0 485 aaKnown RBP5.24□□□□□ -1.57
XRN1-213ENST00000489241 FBXO18Q8NFZ0 1043 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 ZFP28Q8NHY6 868 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 MRI1Q9BV20 369 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 CERS4Q9HA82 394 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 SPON1Q9HCB6 807 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 STARD7Q9NQZ5 370 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 GNL3LQ9NVN8 582 aaKnown RBP5.24□□□□□ -1.57
XRN1-213ENST00000489241 CPA4Q9UI42 421 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 CDC23Q9UJX2 597 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 LRCH1Q9Y2L9 728 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 ACTL7AQ9Y615 435 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 ATRNL1Q5VV63 1379 aa5.24□□□□□ -1.57
XRN1-213ENST00000489241 POM121BA6NF01 834 aa5.23□□□□□ -1.57
XRN1-213ENST00000489241 GOLGA6L6A8MZA4 724 aa5.23□□□□□ -1.57
XRN1-213ENST00000489241 ISM1B1AKI9 464 aa5.23□□□□□ -1.57
XRN1-213ENST00000489241 FOXN3O00409 490 aaPredicted RBP5.23□□□□□ -1.57
XRN1-213ENST00000489241 POMCP01189 267 aa5.23□□□□□ -1.57
XRN1-213ENST00000489241 MTHFD1P11586 935 aaKnown RBP5.23□□□□□ -1.57
XRN1-213ENST00000489241 TSHRP16473 764 aa5.23□□□□□ -1.57
XRN1-213ENST00000489241 SMARCA1P28370 1054 aa5.23□□□□□ -1.57
XRN1-213ENST00000489241 SLC25A3Q00325 362 aa5.23□□□□□ -1.57
XRN1-213ENST00000489241 TOB2Q14106 344 aaPredicted RBP5.23□□□□□ -1.57
XRN1-213ENST00000489241 RALBP1Q15311 655 aa5.23□□□□□ -1.57
XRN1-213ENST00000489241 FLYWCH1Q4VC44 716 aa5.23□□□□□ -1.57
XRN1-213ENST00000489241 DCAF17Q5H9S7 520 aaPredicted RBP5.23□□□□□ -1.57
XRN1-213ENST00000489241 SEM1Q6ZVN7 128 aa5.23□□□□□ -1.57
XRN1-213ENST00000489241 MRGPRGQ86SM5 289 aa5.23□□□□□ -1.57
XRN1-213ENST00000489241 XYLT1Q86Y38 959 aa5.23□□□□□ -1.57
XRN1-213ENST00000489241 NLGN4YQ8NFZ3 816 aaPredicted RBP5.23□□□□□ -1.57
XRN1-213ENST00000489241 ATXN2LQ8WWM7 1075 aaKnown RBP5.23□□□□□ -1.57
XRN1-213ENST00000489241 TFAP2CQ92754 450 aa5.23□□□□□ -1.57
XRN1-213ENST00000489241 MRGPRX1Q96LB2 322 aa5.23□□□□□ -1.57
XRN1-213ENST00000489241 PRRX2Q99811 253 aa5.23□□□□□ -1.57
XRN1-213ENST00000489241 GPR87Q9BY21 358 aa5.23□□□□□ -1.57
XRN1-213ENST00000489241 MAF1Q9H063 256 aa5.23□□□□□ -1.57
XRN1-213ENST00000489241 KCNH6Q9H252 994 aa5.23□□□□□ -1.57
XRN1-213ENST00000489241 ZNF287Q9HBT7 754 aa5.23□□□□□ -1.57
XRN1-213ENST00000489241 SLC2A4RGQ9NR83 387 aa5.23□□□□□ -1.57
XRN1-213ENST00000489241 POGKQ9P215 609 aa5.23□□□□□ -1.57
XRN1-213ENST00000489241 CPNE7Q9UBL6 633 aa5.23□□□□□ -1.57
XRN1-213ENST00000489241 FEZ2Q9UHY8 353 aaPredicted RBP5.23□□□□□ -1.57
XRN1-213ENST00000489241 OGDHLQ9ULD0 1010 aa5.23□□□□□ -1.57
XRN1-213ENST00000489241 PCDHA6Q9UN73 950 aa5.23□□□□□ -1.57
XRN1-213ENST00000489241 PCDHA1Q9Y5I3 950 aa5.23□□□□□ -1.57
XRN1-213ENST00000489241 F8W8V4 182 aa5.22□□□□□ -1.57
XRN1-213ENST00000489241 WNT10BO00744 389 aa5.22□□□□□ -1.57
XRN1-213ENST00000489241 HK1P19367 917 aa5.22□□□□□ -1.57
XRN1-213ENST00000489241 FPR1P21462 350 aa5.22□□□□□ -1.57
XRN1-213ENST00000489241 PCSK1P29120 753 aa5.22□□□□□ -1.57
XRN1-213ENST00000489241 ALDH1A3P47895 512 aa5.22□□□□□ -1.57
XRN1-213ENST00000489241 RABGGTBP53611 331 aa5.22□□□□□ -1.57
XRN1-213ENST00000489241 SUMO3P55854 103 aaPredicted RBP5.22□□□□□ -1.57
XRN1-213ENST00000489241 TNFAIP2Q03169 654 aa5.22□□□□□ -1.57
XRN1-213ENST00000489241 UBXN2BQ14CS0 331 aa5.22□□□□□ -1.57
XRN1-213ENST00000489241 ATXN7L2Q5T6C5 722 aaPredicted RBP5.22□□□□□ -1.57
XRN1-213ENST00000489241 ANKS6Q68DC2 871 aa5.22□□□□□ -1.57
XRN1-213ENST00000489241 HIBCHQ6NVY1 386 aaPredicted RBP5.22□□□□□ -1.57
XRN1-213ENST00000489241 CCDC174Q6PII3 467 aa5.22□□□□□ -1.57
XRN1-213ENST00000489241 HTR3DQ70Z44 454 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms