RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 PURAQ00577 322 aaKnown RBP9.6□□□□□ -0.87
EXOSC1-211ENST00000489158 LAMTOR4Q0VGL1 99 aa9.6□□□□□ -0.87
EXOSC1-211ENST00000489158 MKRN4PQ13434 485 aaPredicted RBP9.6□□□□□ -0.87
EXOSC1-211ENST00000489158 PRPF4BQ13523 1007 aaKnown RBP9.6□□□□□ -0.87
EXOSC1-211ENST00000489158 ITIH4Q14624 930 aa9.6□□□□□ -0.87
EXOSC1-211ENST00000489158 SLFN12LQ6IEE8 588 aa9.6□□□□□ -0.87
EXOSC1-211ENST00000489158 SYCE1Q8N0S2 351 aa9.6□□□□□ -0.87
EXOSC1-211ENST00000489158 PPP1R13LQ8WUF5 828 aa9.6□□□□□ -0.87
EXOSC1-211ENST00000489158 POMGNT1Q8WZA1 660 aa9.6□□□□□ -0.87
EXOSC1-211ENST00000489158 RNF25Q96BH1 459 aaPredicted RBP9.6□□□□□ -0.87
EXOSC1-211ENST00000489158 RAB17Q9H0T7 212 aa9.6□□□□□ -0.87
EXOSC1-211ENST00000489158 ADAM7Q9H2U9 754 aa9.6□□□□□ -0.87
EXOSC1-211ENST00000489158 HSPBP1Q9NZL4 362 aa9.6□□□□□ -0.87
EXOSC1-211ENST00000489158 AMFRQ9UKV5 643 aa9.6□□□□□ -0.87
EXOSC1-211ENST00000489158 AKT3Q9Y243 479 aa9.6□□□□□ -0.87
EXOSC1-211ENST00000489158 FRMPD3Q5JV73 1810 aa9.6□□□□□ -0.87
EXOSC1-211ENST00000489158 FAM170AA1A519 330 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 MBLAC1A4D2B0 266 aaPredicted RBP9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 ANKRD63C9JTQ0 380 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 DDX3XO00571 662 aaKnown RBP eCLIP9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 ADAMTS4O75173 837 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 RTN2O75298 545 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 AFPP02771 609 aaKnown RBP9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 RPLP2P05387 115 aaKnown RBP9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 GJB1P08034 283 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 VIMP08670 466 aaKnown RBP9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 SMIM10L2AP0DMW4 78 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 SMIM10L2BP0DMW5 78 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 PRKCIP41743 596 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 MMP13P45452 471 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 PHKA2P46019 1235 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 PMS2P54278 862 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 DR1Q01658 176 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 EXOC3L4Q17RC7 722 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 GNASQ5JWF2 1037 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 SPDYCQ5MJ68 293 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 GJB7Q6PEY0 223 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 ZPBP2Q6X784 338 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 ZNF410Q86VK4 478 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 XXYLT1Q8NBI6 393 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 PCSK9Q8NBP7 692 aaKnown RBP9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 THOC1Q96FV9 657 aaKnown RBP9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 RSRC1Q96IZ7 334 aaKnown RBP9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 PPP1R16BQ96T49 567 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 PRMT1Q99873 361 aaKnown RBP9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 KIAA1586Q9HCI6 787 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 XPNPEP3Q9NQH7 507 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 ZDHHC18Q9NUE0 388 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 SETD4Q9NVD3 440 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 SAMD15Q9P1V8 674 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 SNX24Q9Y343 169 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 SCN10AQ9Y5Y9 1956 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 A0A0A6YYK5 440 aaPredicted RBP9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 SMIM35A0A1B0GVV1 85 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 GOLGA8IPA6NC78 632 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 GOLGA8JA6NMD2 632 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 RGS16O15492 202 aaPredicted RBP9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 DDX3YO15523 660 aaKnown RBP9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 PGK1P00558 417 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 NUDT17P0C025 328 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 KRT13P13646 458 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 CCND3P30281 292 aaPredicted RBP9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 HOXC8P31273 242 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 GALCP54803 685 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 PLTPP55058 493 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 MCCD1P59942 119 aaPredicted RBP9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 PTENP60484 403 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 MYO1EQ12965 1108 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 TMEM132AQ24JP5 1023 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 DENND2CQ68D51 928 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 DUPD1Q68J44 220 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 INTS8Q75QN2 995 aaKnown RBP9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 TAS1R3Q7RTX0 852 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 TRPM8Q7Z2W7 1104 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 USP37Q86T82 979 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 VPS36Q86VN1 386 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 KLHDC9Q8NEP7 349 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 UHMK1Q8TAS1 419 aaKnown RBP9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 NSMCE1Q8WV22 266 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 PGM2Q96G03 612 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 ERP44Q9BS26 406 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 MRPL4Q9BYD3 311 aaKnown RBP9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 CCDC113Q9H0I3 377 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 PABPC3Q9H361 631 aaKnown RBP9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 ERVK-5Q9HDB9 667 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 OSGEPQ9NPF4 335 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 INTS9Q9NV88 658 aaKnown RBP9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 TTC7AQ9ULT0 858 aaPredicted RBP9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 AGAP1Q9UPQ3 857 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 USP20Q9Y2K6 914 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 L3MBTL1Q9Y468 752 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 DAAM1Q9Y4D1 1078 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 STYXL1Q9Y6J8 313 aa9.59□□□□□ -0.87
EXOSC1-211ENST00000489158 MYADML2A6NDP7 307 aa9.58□□□□□ -0.88
EXOSC1-211ENST00000489158 INO80B-WBP1J3KQ70 363 aa9.58□□□□□ -0.88
EXOSC1-211ENST00000489158 CABYRO75952 493 aa9.58□□□□□ -0.88
EXOSC1-211ENST00000489158 GFPT2O94808 682 aa9.58□□□□□ -0.88
EXOSC1-211ENST00000489158 ANP32DO95626 131 aa9.58□□□□□ -0.88
EXOSC1-211ENST00000489158 LDHAP00338 332 aaKnown RBP9.58□□□□□ -0.88
EXOSC1-211ENST00000489158 VTNP04004 478 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms