RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 SRGAP2BP0DMP2 458 aa17.15■□□□□ 0.34
HDAC7-224ENST00000488927 MTIF2P46199 727 aaKnown RBP17.15■□□□□ 0.34
HDAC7-224ENST00000488927 NDUFV1P49821 464 aa17.15■□□□□ 0.34
HDAC7-224ENST00000488927 ZNF165P49910 485 aa17.15■□□□□ 0.34
HDAC7-224ENST00000488927 MYL6P60660 151 aa17.15■□□□□ 0.34
HDAC7-224ENST00000488927 TNNC1P63316 161 aa17.15■□□□□ 0.34
HDAC7-224ENST00000488927 MRPL58Q14197 206 aaKnown RBP17.15■□□□□ 0.34
HDAC7-224ENST00000488927 TCEAL5Q5H9L2 206 aa17.15■□□□□ 0.34
HDAC7-224ENST00000488927 VARS2Q5ST30 1063 aaKnown RBP17.15■□□□□ 0.34
HDAC7-224ENST00000488927 IRF2BP1Q8IU81 584 aa17.15■□□□□ 0.34
HDAC7-224ENST00000488927 CREBRFQ8IUR6 639 aa17.15■□□□□ 0.34
HDAC7-224ENST00000488927 MICALL1Q8N3F8 863 aa17.15■□□□□ 0.34
HDAC7-224ENST00000488927 AUTS2Q8WXX7 1259 aa17.15■□□□□ 0.34
HDAC7-224ENST00000488927 B3GALT6Q96L58 329 aa17.15■□□□□ 0.34
HDAC7-224ENST00000488927 XYLT2Q9H1B5 865 aa17.15■□□□□ 0.34
HDAC7-224ENST00000488927 MTRRQ9UBK8 725 aa17.15■□□□□ 0.34
HDAC7-224ENST00000488927 SNX9Q9Y5X1 595 aa17.15■□□□□ 0.34
HDAC7-224ENST00000488927 MYO9BQ13459 2157 aa17.15■□□□□ 0.34
HDAC7-224ENST00000488927 ASS1P00966 412 aaKnown RBP17.14■□□□□ 0.33
HDAC7-224ENST00000488927 AFPP02771 609 aaKnown RBP17.14■□□□□ 0.33
HDAC7-224ENST00000488927 NRIP1P48552 1158 aa17.14■□□□□ 0.33
HDAC7-224ENST00000488927 FMO5P49326 533 aa17.14■□□□□ 0.33
HDAC7-224ENST00000488927 KCNH2Q12809 1159 aa17.14■□□□□ 0.33
HDAC7-224ENST00000488927 DUSP6Q16828 381 aa17.14■□□□□ 0.33
HDAC7-224ENST00000488927 WDR72Q3MJ13 1102 aa17.14■□□□□ 0.33
HDAC7-224ENST00000488927 ZNF667Q5HYK9 610 aa17.14■□□□□ 0.33
HDAC7-224ENST00000488927 OVOS1Q6IE37 1185 aa17.14■□□□□ 0.33
HDAC7-224ENST00000488927 THEM5Q8N1Q8 247 aa17.14■□□□□ 0.33
HDAC7-224ENST00000488927 ANKRD20A12PQ8NF67 263 aa17.14■□□□□ 0.33
HDAC7-224ENST00000488927 TAS1R2Q8TE23 839 aa17.14■□□□□ 0.33
HDAC7-224ENST00000488927 FAXDC2Q96IV6 333 aa17.14■□□□□ 0.33
HDAC7-224ENST00000488927 KLHL5Q96PQ7 755 aa17.14■□□□□ 0.33
HDAC7-224ENST00000488927 RAB20Q9NX57 234 aa17.14■□□□□ 0.33
HDAC7-224ENST00000488927 DPP7Q9UHL4 492 aa17.14■□□□□ 0.33
HDAC7-224ENST00000488927 COQ4Q9Y3A0 265 aa17.14■□□□□ 0.33
HDAC7-224ENST00000488927 PCDHGC5Q9Y5F6 944 aa17.14■□□□□ 0.33
HDAC7-224ENST00000488927 OR6C75A6NL08 312 aa17.13■□□□□ 0.33
HDAC7-224ENST00000488927 BECN2A8MW95 431 aa17.13■□□□□ 0.33
HDAC7-224ENST00000488927 KCNJ18B7U540 433 aa17.13■□□□□ 0.33
HDAC7-224ENST00000488927 TEX28O15482 410 aa17.13■□□□□ 0.33
HDAC7-224ENST00000488927 TPM2P07951 284 aa17.13■□□□□ 0.33
HDAC7-224ENST00000488927 CNPP09543 421 aaKnown RBP17.13■□□□□ 0.33
HDAC7-224ENST00000488927 KLRC2P26717 231 aa17.13■□□□□ 0.33
HDAC7-224ENST00000488927 MYL7Q01449 175 aa17.13■□□□□ 0.33
HDAC7-224ENST00000488927 KCNJ12Q14500 433 aa17.13■□□□□ 0.33
HDAC7-224ENST00000488927 MAN2A1Q16706 1144 aa17.13■□□□□ 0.33
HDAC7-224ENST00000488927 CTXN3Q4LDR2 81 aa17.13■□□□□ 0.33
HDAC7-224ENST00000488927 CBWD6Q4V339 395 aa17.13■□□□□ 0.33
HDAC7-224ENST00000488927 TCP11X2Q5H9J9 407 aa17.13■□□□□ 0.33
HDAC7-224ENST00000488927 WDR44Q5JSH3 913 aa17.13■□□□□ 0.33
HDAC7-224ENST00000488927 CBWD3Q5JTY5 395 aa17.13■□□□□ 0.33
HDAC7-224ENST00000488927 CBWD5Q5RIA9 395 aa17.13■□□□□ 0.33
HDAC7-224ENST00000488927 CDKAL1Q5VV42 579 aa17.13■□□□□ 0.33
HDAC7-224ENST00000488927 ELMSAN1Q6PJG2 1045 aa17.13■□□□□ 0.33
HDAC7-224ENST00000488927 PRSS55Q6UWB4 352 aaPredicted RBP17.13■□□□□ 0.33
HDAC7-224ENST00000488927 ADGRD2Q7Z7M1 963 aa17.13■□□□□ 0.33
HDAC7-224ENST00000488927 EFHBQ8N7U6 833 aa17.13■□□□□ 0.33
HDAC7-224ENST00000488927 MMS19Q96T76 1030 aa17.13■□□□□ 0.33
HDAC7-224ENST00000488927 SAMSN1Q9NSI8 373 aaKnown RBP17.13■□□□□ 0.33
HDAC7-224ENST00000488927 CLASP2O75122 1294 aaKnown RBP17.12■□□□□ 0.33
HDAC7-224ENST00000488927 TACC1O75410 805 aa17.12■□□□□ 0.33
HDAC7-224ENST00000488927 LHX1P48742 406 aa17.12■□□□□ 0.33
HDAC7-224ENST00000488927 HYAL1Q12794 435 aa17.12■□□□□ 0.33
HDAC7-224ENST00000488927 WSCD1Q658N2 575 aa17.12■□□□□ 0.33
HDAC7-224ENST00000488927 SCARA3Q6AZY7 606 aa17.12■□□□□ 0.33
HDAC7-224ENST00000488927 SLC8B1Q6J4K2 584 aa17.12■□□□□ 0.33
HDAC7-224ENST00000488927 LIMS2Q7Z4I7 341 aa17.12■□□□□ 0.33
HDAC7-224ENST00000488927 RBM23Q86U06 439 aaKnown RBP17.12■□□□□ 0.33
HDAC7-224ENST00000488927 ADGRF2Q8IZF7 708 aa17.12■□□□□ 0.33
HDAC7-224ENST00000488927 PDCL2Q8N4E4 241 aa17.12■□□□□ 0.33
HDAC7-224ENST00000488927 AOPEPQ8N6M6 819 aa17.12■□□□□ 0.33
HDAC7-224ENST00000488927 MAFAQ8NHW3 353 aaPredicted RBP17.12■□□□□ 0.33
HDAC7-224ENST00000488927 CLSTN3Q9BQT9 956 aa17.12■□□□□ 0.33
HDAC7-224ENST00000488927 TUBGCP2Q9BSJ2 902 aa17.12■□□□□ 0.33
HDAC7-224ENST00000488927 FANCLQ9NW38 375 aa17.12■□□□□ 0.33
HDAC7-224ENST00000488927 NXF1Q9UBU9 619 aaKnown RBP17.12■□□□□ 0.33
HDAC7-224ENST00000488927 FBXL5Q9UKA1 691 aa17.12■□□□□ 0.33
HDAC7-224ENST00000488927 L1RE1Q9UN81 338 aa17.12■□□□□ 0.33
HDAC7-224ENST00000488927 TIMM13Q9Y5L4 95 aaPredicted RBP17.12■□□□□ 0.33
HDAC7-224ENST00000488927 GTPBP10A4D1E9 387 aaKnown RBP17.11■□□□□ 0.33
HDAC7-224ENST00000488927 PER2O15055 1255 aa17.11■□□□□ 0.33
HDAC7-224ENST00000488927 TBC1D4O60343 1298 aa17.11■□□□□ 0.33
HDAC7-224ENST00000488927 GLUD1P00367 558 aa17.11■□□□□ 0.33
HDAC7-224ENST00000488927 TPM4P67936 248 aa17.11■□□□□ 0.33
HDAC7-224ENST00000488927 NOP14P78316 857 aaKnown RBP17.11■□□□□ 0.33
HDAC7-224ENST00000488927 RAB33AQ14088 237 aa17.11■□□□□ 0.33
HDAC7-224ENST00000488927 COL19A1Q14993 1142 aa17.11■□□□□ 0.33
HDAC7-224ENST00000488927 NCAPHQ15003 741 aa17.11■□□□□ 0.33
HDAC7-224ENST00000488927 SOWAHAQ2M3V2 549 aa17.11■□□□□ 0.33
HDAC7-224ENST00000488927 NIF3L1Q9GZT8 377 aa17.11■□□□□ 0.33
HDAC7-224ENST00000488927 FAM124BQ9H5Z6 455 aaPredicted RBP17.11■□□□□ 0.33
HDAC7-224ENST00000488927 MAFFQ9ULX9 164 aa17.11■□□□□ 0.33
HDAC7-224ENST00000488927 CDY1Q9Y6F8 540 aa17.11■□□□□ 0.33
HDAC7-224ENST00000488927 SCN1AP35498 2009 aa17.1■□□□□ 0.33
HDAC7-224ENST00000488927 RPL17P18621 184 aaKnown RBP17.1■□□□□ 0.33
HDAC7-224ENST00000488927 CDK11BP21127 795 aaKnown RBP17.1■□□□□ 0.33
HDAC7-224ENST00000488927 WARSP23381 471 aaKnown RBP17.1■□□□□ 0.33
HDAC7-224ENST00000488927 PCSK1P29120 753 aa17.1■□□□□ 0.33
HDAC7-224ENST00000488927 OR1D2P34982 312 aa17.1■□□□□ 0.33
HDAC7-224ENST00000488927 CLCN4P51793 760 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms