RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 OVOS1Q6IE37 1185 aa20■□□□□ 0.79
HDAC6-231ENST00000488905 SLC39A4Q6P5W5 647 aa20■□□□□ 0.79
HDAC6-231ENST00000488905 DCLK2Q8N568 766 aa20■□□□□ 0.79
HDAC6-231ENST00000488905 ZBTB44Q8NCP5 570 aa20■□□□□ 0.79
HDAC6-231ENST00000488905 ATRIPQ8WXE1 791 aa20■□□□□ 0.79
HDAC6-231ENST00000488905 NELL1Q92832 810 aa20■□□□□ 0.79
HDAC6-231ENST00000488905 DNAJC25Q9H1X3 360 aa20■□□□□ 0.79
HDAC6-231ENST00000488905 TRPV5Q9NQA5 729 aa20■□□□□ 0.79
HDAC6-231ENST00000488905 ZSCAN32Q9NX65 697 aa20■□□□□ 0.79
HDAC6-231ENST00000488905 SMC3Q9UQE7 1217 aa20■□□□□ 0.79
HDAC6-231ENST00000488905 PIAS3Q9Y6X2 628 aa20■□□□□ 0.79
HDAC6-231ENST00000488905 ZNF638Q14966 1978 aaKnown RBP20■□□□□ 0.79
HDAC6-231ENST00000488905 OBSL1O75147 1896 aa20■□□□□ 0.79
HDAC6-231ENST00000488905 A0A0B4J269 797 aa19.99■□□□□ 0.79
HDAC6-231ENST00000488905 MTMR11A4FU01 709 aa19.99■□□□□ 0.79
HDAC6-231ENST00000488905 TRAK2O60296 914 aa19.99■□□□□ 0.79
HDAC6-231ENST00000488905 TBCAO75347 108 aaKnown RBP19.99■□□□□ 0.79
HDAC6-231ENST00000488905 BMP15O95972 392 aa19.99■□□□□ 0.79
HDAC6-231ENST00000488905 KRT18P05783 430 aaKnown RBP19.99■□□□□ 0.79
HDAC6-231ENST00000488905 EPHB3P54753 998 aa19.99■□□□□ 0.79
HDAC6-231ENST00000488905 DUSP4Q13115 394 aa19.99■□□□□ 0.79
HDAC6-231ENST00000488905 MTAPQ13126 283 aa19.99■□□□□ 0.79
HDAC6-231ENST00000488905 MYBPC2Q14324 1141 aa19.99■□□□□ 0.79
HDAC6-231ENST00000488905 MCM6Q14566 821 aa19.99■□□□□ 0.79
HDAC6-231ENST00000488905 KARSQ15046 597 aaKnown RBP19.99■□□□□ 0.79
HDAC6-231ENST00000488905 JADE1Q6IE81 842 aa19.99■□□□□ 0.79
HDAC6-231ENST00000488905 TSSK4Q6SA08 328 aa19.99■□□□□ 0.79
HDAC6-231ENST00000488905 MFSD6LQ8IWD5 586 aa19.99■□□□□ 0.79
HDAC6-231ENST00000488905 RASSF8Q8NHQ8 419 aa19.99■□□□□ 0.79
HDAC6-231ENST00000488905 RAD54LQ92698 747 aa19.99■□□□□ 0.79
HDAC6-231ENST00000488905 FAM212AQ96EL1 285 aa19.99■□□□□ 0.79
HDAC6-231ENST00000488905 FIZ1Q96SL8 496 aa19.99■□□□□ 0.79
HDAC6-231ENST00000488905 LRRC3Q9BY71 257 aa19.99■□□□□ 0.79
HDAC6-231ENST00000488905 GPR88Q9GZN0 384 aa19.99■□□□□ 0.79
HDAC6-231ENST00000488905 CHRDQ9H2X0 955 aa19.99■□□□□ 0.79
HDAC6-231ENST00000488905 CPSF3Q9UKF6 684 aaKnown RBP19.99■□□□□ 0.79
HDAC6-231ENST00000488905 A0A1W2PRU2 124 aa19.98■□□□□ 0.79
HDAC6-231ENST00000488905 ZNF263O14978 683 aa19.98■□□□□ 0.79
HDAC6-231ENST00000488905 LILRB5O75023 590 aa19.98■□□□□ 0.79
HDAC6-231ENST00000488905 NFICP08651 508 aa19.98■□□□□ 0.79
HDAC6-231ENST00000488905 ABCD1P33897 745 aa19.98■□□□□ 0.79
HDAC6-231ENST00000488905 LONP1P36776 959 aaKnown RBP19.98■□□□□ 0.79
HDAC6-231ENST00000488905 LILRA4P59901 499 aa19.98■□□□□ 0.79
HDAC6-231ENST00000488905 GRIN1Q05586 938 aa19.98■□□□□ 0.79
HDAC6-231ENST00000488905 CENPPQ6IPU0 288 aa19.98■□□□□ 0.79
HDAC6-231ENST00000488905 CD302Q8IX05 232 aa19.98■□□□□ 0.79
HDAC6-231ENST00000488905 FAM3CQ92520 227 aa19.98■□□□□ 0.79
HDAC6-231ENST00000488905 SENP8Q96LD8 212 aa19.98■□□□□ 0.79
HDAC6-231ENST00000488905 IER2Q9BTL4 223 aa19.98■□□□□ 0.79
HDAC6-231ENST00000488905 EPC1Q9H2F5 836 aa19.98■□□□□ 0.79
HDAC6-231ENST00000488905 ZHX3Q9H4I2 956 aa19.98■□□□□ 0.79
HDAC6-231ENST00000488905 NCDNQ9UBB6 729 aa19.98■□□□□ 0.79
HDAC6-231ENST00000488905 SMG5Q9UPR3 1016 aaKnown RBP19.98■□□□□ 0.79
HDAC6-231ENST00000488905 HEPACAM2A8MVW5 462 aa19.97■□□□□ 0.79
HDAC6-231ENST00000488905 ARNTLO00327 626 aa19.97■□□□□ 0.79
HDAC6-231ENST00000488905 NMT1P30419 496 aaKnown RBP19.97■□□□□ 0.79
HDAC6-231ENST00000488905 ALDH1A3P47895 512 aa19.97■□□□□ 0.79
HDAC6-231ENST00000488905 MCM2P49736 904 aa19.97■□□□□ 0.79
HDAC6-231ENST00000488905 GTF2BQ00403 316 aa19.97■□□□□ 0.79
HDAC6-231ENST00000488905 TMEM132DQ14C87 1099 aa19.97■□□□□ 0.79
HDAC6-231ENST00000488905 C9orf57Q5W0N0 161 aa19.97■□□□□ 0.79
HDAC6-231ENST00000488905 LARP1BQ659C4 914 aaKnown RBP19.97■□□□□ 0.79
HDAC6-231ENST00000488905 BRAPQ7Z569 592 aa19.97■□□□□ 0.79
HDAC6-231ENST00000488905 TTC9BQ8N6N2 239 aa19.97■□□□□ 0.79
HDAC6-231ENST00000488905 LARP4BQ92615 738 aaKnown RBP19.97■□□□□ 0.79
HDAC6-231ENST00000488905 E2F7Q96AV8 911 aa19.97■□□□□ 0.79
HDAC6-231ENST00000488905 TMEM209Q96SK2 561 aa19.97■□□□□ 0.79
HDAC6-231ENST00000488905 FAM126AQ9BYI3 521 aaPredicted RBP19.97■□□□□ 0.79
HDAC6-231ENST00000488905 DERAQ9Y315 318 aa19.97■□□□□ 0.79
HDAC6-231ENST00000488905 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.97■□□□□ 0.79
HDAC6-231ENST00000488905 NCOR2Q9Y618 2525 aa19.97■□□□□ 0.79
HDAC6-231ENST00000488905 PAX3P23760 479 aa19.96■□□□□ 0.79
HDAC6-231ENST00000488905 STXBP5Q5T5C0 1151 aa19.96■□□□□ 0.79
HDAC6-231ENST00000488905 ATAD1Q8NBU5 361 aa19.96■□□□□ 0.79
HDAC6-231ENST00000488905 PSMG2Q969U7 264 aa19.96■□□□□ 0.79
HDAC6-231ENST00000488905 RSPRY1Q96DX4 576 aa19.96■□□□□ 0.79
HDAC6-231ENST00000488905 SLC27A5Q9Y2P5 690 aa19.96■□□□□ 0.79
HDAC6-231ENST00000488905 ASB3Q9Y575 518 aa19.96■□□□□ 0.79
HDAC6-231ENST00000488905 RALGAPA1Q6GYQ0 2036 aa19.95■□□□□ 0.78
HDAC6-231ENST00000488905 ANO9A1A5B4 782 aa19.95■□□□□ 0.78
HDAC6-231ENST00000488905 PIRO00625 290 aa19.95■□□□□ 0.78
HDAC6-231ENST00000488905 SOAT2O75908 522 aa19.95■□□□□ 0.78
HDAC6-231ENST00000488905 CYP11A1P05108 521 aa19.95■□□□□ 0.78
HDAC6-231ENST00000488905 TDGF1P13385 188 aa19.95■□□□□ 0.78
HDAC6-231ENST00000488905 FCHO2Q0JRZ9 810 aa19.95■□□□□ 0.78
HDAC6-231ENST00000488905 SF3A1Q15459 793 aaKnown RBP19.95■□□□□ 0.78
HDAC6-231ENST00000488905 ARMCX5Q6P1M9 558 aa19.95■□□□□ 0.78
HDAC6-231ENST00000488905 GAREM2Q75VX8 874 aa19.95■□□□□ 0.78
HDAC6-231ENST00000488905 DGLUCYQ7Z3D6 616 aa19.95■□□□□ 0.78
HDAC6-231ENST00000488905 YAF2Q8IY57 180 aa19.95■□□□□ 0.78
HDAC6-231ENST00000488905 OR10T2Q8NGX3 314 aa19.95■□□□□ 0.78
HDAC6-231ENST00000488905 MSANTD3Q96H12 275 aa19.95■□□□□ 0.78
HDAC6-231ENST00000488905 MKNK1Q9BUB5 465 aa19.95■□□□□ 0.78
HDAC6-231ENST00000488905 UPF2Q9HAU5 1272 aaKnown RBP19.95■□□□□ 0.78
HDAC6-231ENST00000488905 HSFX1Q9UBD0 423 aa19.95■□□□□ 0.78
HDAC6-231ENST00000488905 C2CD2Q9Y426 696 aa19.95■□□□□ 0.78
HDAC6-231ENST00000488905 SPTBN2O15020 2390 aa19.94■□□□□ 0.78
HDAC6-231ENST00000488905 TISP43B9A030 160 aa19.94■□□□□ 0.78
HDAC6-231ENST00000488905 ANKRD63C9JTQ0 380 aa19.94■□□□□ 0.78
HDAC6-231ENST00000488905 CHADO15335 359 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms