RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 SMAPO00193 183 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 PIRO00625 290 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 PTGESO14684 152 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 HOXA2O43364 376 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 AKR1B10O60218 316 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 IPO7O95373 1038 aaKnown RBP8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 STAU1O95793 577 aaKnown RBP8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 POMCP01189 267 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 TNFAIP3P21580 790 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 LRPAP1P30533 357 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 RPL9P32969 192 aaKnown RBP8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 EIF4A3P38919 411 aaKnown RBP8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 TAF6P49848 677 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 SCNN1GP51170 649 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 PTPN5P54829 565 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 BPIFB4P59827 614 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 RNASELQ05823 741 aaKnown RBP8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 NOMO2Q5JPE7 1267 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 SCARA3Q6AZY7 606 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 MFSD5Q6N075 450 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 WDR59Q6PJI9 974 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 IRF2BP2Q7Z5L9 587 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 UBE2Q1Q7Z7E8 422 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 VPS36Q86VN1 386 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 NPAS4Q8IUM7 802 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 TMEM139Q8IV31 216 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 CCDC170Q8IYT3 715 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 GSTCDQ8NEC7 633 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 CXorf38Q8TB03 319 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 LINC01599Q8WXQ3 324 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 SHC3Q92529 594 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 KREMEN1Q96MU8 473 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 FAM193BQ96PV7 902 aaPredicted RBP8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 PPP1R10Q96QC0 940 aaKnown RBP8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 MMS19Q96T76 1030 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 GPR88Q9GZN0 384 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 XYLT2Q9H1B5 865 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 VRTNQ9H8Y1 702 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 CYP3A43Q9HB55 503 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 KANSL3Q9P2N6 904 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 PYCARDQ9ULZ3 195 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 POLIQ9UNA4 740 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 PCDHB4Q9Y5E5 795 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 EPN1Q9Y6I3 576 aaPredicted RBP8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 MKI67P46013 3256 aaKnown RBP8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 RALGAPA2Q2PPJ7 1873 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 ABHD14A-ACY1A0A1B0GW23 586 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 ANO9A1A5B4 782 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 KPNA7A9QM74 516 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 CYP26A1O43174 497 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 CCP110O43303 1012 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 ZSCAN12O43309 604 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 EFCAB14O75071 495 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 AMHP03971 560 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 PFKMP08237 780 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 WEE2P0C1S8 567 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 PNMA6AP0CW24 399 aaPredicted RBP8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 FGFR1P11362 822 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 CSF2RAP15509 400 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 CD58P19256 250 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 PAX3P23760 479 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 PRKCIP41743 596 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 KCNJ6P48051 423 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 AFF1P51825 1210 aaKnown RBP8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 KRT83P78385 493 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 PTK2Q05397 1052 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 GRIK3Q13003 919 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 PPIGQ13427 754 aaKnown RBP eCLIP8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 TUSC3Q13454 348 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 SPA17Q15506 151 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 TCTN1Q2MV58 587 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 SV2CQ496J9 727 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 E4F1Q66K89 784 aaPredicted RBP8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 SMYD5Q6GMV2 418 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 TMEM270Q6UE05 265 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 RAD9BQ6WBX8 426 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 SCARA5Q6ZMJ2 495 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 FAM71AQ8IYT1 594 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 TMEM130Q8N3G9 435 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 TTC39CQ8N584 583 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 TTC13Q8NBP0 860 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 UROC1Q96N76 676 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 HTATIP2Q9BUP3 242 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 DNAI2Q9GZS0 605 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 HAUS4Q9H6D7 363 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 GOLGA2P5Q9HBQ8 144 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 CISHQ9NSE2 258 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 ARHGAP20Q9P2F6 1191 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 SNX9Q9Y5X1 595 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 DNAH12Q6ZR08 3092 aa8.09□□□□□ -1.11
APOBEC3A-203ENST00000488758 SCN5AQ14524 2016 aa8.08□□□□□ -1.12
APOBEC3A-203ENST00000488758 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.08□□□□□ -1.12
APOBEC3A-203ENST00000488758 CASTOR2A6NHX0 329 aa8.08□□□□□ -1.12
APOBEC3A-203ENST00000488758 ESPNB1AK53 854 aa8.08□□□□□ -1.12
APOBEC3A-203ENST00000488758 EIF3CLB5ME19 914 aaKnown RBP8.08□□□□□ -1.12
APOBEC3A-203ENST00000488758 PODXLO00592 558 aa8.08□□□□□ -1.12
APOBEC3A-203ENST00000488758 PPEF2O14830 753 aa8.08□□□□□ -1.12
APOBEC3A-203ENST00000488758 INPPL1O15357 1258 aa8.08□□□□□ -1.12
APOBEC3A-203ENST00000488758 HUS1O60921 280 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms