RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 GOLGA6L4A6NEF3 574 aa17.2■□□□□ 0.34
CTDSP1-209ENST00000488627 PDXKO00764 312 aa17.2■□□□□ 0.34
CTDSP1-209ENST00000488627 OR4Q2P0C623 313 aa17.2■□□□□ 0.34
CTDSP1-209ENST00000488627 PNPLA4P41247 253 aa17.2■□□□□ 0.34
CTDSP1-209ENST00000488627 NTHL1P78549 312 aa17.2■□□□□ 0.34
CTDSP1-209ENST00000488627 RBP5P82980 135 aa17.2■□□□□ 0.34
CTDSP1-209ENST00000488627 FAM160A1Q05DH4 1040 aa17.2■□□□□ 0.34
CTDSP1-209ENST00000488627 ADCY1Q08828 1119 aa17.2■□□□□ 0.34
CTDSP1-209ENST00000488627 GPR17Q13304 367 aa17.2■□□□□ 0.34
CTDSP1-209ENST00000488627 MYBPC2Q14324 1141 aa17.2■□□□□ 0.34
CTDSP1-209ENST00000488627 DUOXA2Q1HG44 320 aa17.2■□□□□ 0.34
CTDSP1-209ENST00000488627 GRASPQ7Z6J2 395 aaPredicted RBP17.2■□□□□ 0.34
CTDSP1-209ENST00000488627 OR10T2Q8NGX3 314 aa17.2■□□□□ 0.34
CTDSP1-209ENST00000488627 GOLGA5Q8TBA6 731 aa17.2■□□□□ 0.34
CTDSP1-209ENST00000488627 PLEKHO2Q8TD55 490 aa17.2■□□□□ 0.34
CTDSP1-209ENST00000488627 ZNF516Q92618 1163 aa17.2■□□□□ 0.34
CTDSP1-209ENST00000488627 EDAQ92838 391 aa17.2■□□□□ 0.34
CTDSP1-209ENST00000488627 MYADMQ96S97 322 aa17.2■□□□□ 0.34
CTDSP1-209ENST00000488627 TMEM209Q96SK2 561 aa17.2■□□□□ 0.34
CTDSP1-209ENST00000488627 DNMT3BQ9UBC3 853 aaKnown RBP17.2■□□□□ 0.34
CTDSP1-209ENST00000488627 MAFFQ9ULX9 164 aa17.2■□□□□ 0.34
CTDSP1-209ENST00000488627 TULP1O00294 542 aaPredicted RBP17.19■□□□□ 0.34
CTDSP1-209ENST00000488627 ASGR2P07307 311 aa17.19■□□□□ 0.34
CTDSP1-209ENST00000488627 TMEM191BP0C7N4 346 aa17.19■□□□□ 0.34
CTDSP1-209ENST00000488627 ELF1P32519 619 aa17.19■□□□□ 0.34
CTDSP1-209ENST00000488627 ZXDAP98168 799 aa17.19■□□□□ 0.34
CTDSP1-209ENST00000488627 PNOCQ13519 176 aa17.19■□□□□ 0.34
CTDSP1-209ENST00000488627 PTPN21Q16825 1174 aa17.19■□□□□ 0.34
CTDSP1-209ENST00000488627 SV2CQ496J9 727 aa17.19■□□□□ 0.34
CTDSP1-209ENST00000488627 WDR49Q8IV35 697 aa17.19■□□□□ 0.34
CTDSP1-209ENST00000488627 SPATA20Q8TB22 786 aa17.19■□□□□ 0.34
CTDSP1-209ENST00000488627 ACSF2Q96CM8 615 aaPredicted RBP17.19■□□□□ 0.34
CTDSP1-209ENST00000488627 ZNF560Q96MR9 790 aa17.19■□□□□ 0.34
CTDSP1-209ENST00000488627 TIGD1Q96MW7 591 aa17.19■□□□□ 0.34
CTDSP1-209ENST00000488627 LRFN3Q9BTN0 628 aa17.19■□□□□ 0.34
CTDSP1-209ENST00000488627 CRISPLD1Q9H336 500 aa17.19■□□□□ 0.34
CTDSP1-209ENST00000488627 CYP4F11Q9HBI6 524 aa17.19■□□□□ 0.34
CTDSP1-209ENST00000488627 HCFC1R1Q9NWW0 138 aa17.19■□□□□ 0.34
CTDSP1-209ENST00000488627 GDAP2Q9NXN4 497 aa17.19■□□□□ 0.34
CTDSP1-209ENST00000488627 EPS15L1Q9UBC2 864 aa17.19■□□□□ 0.34
CTDSP1-209ENST00000488627 DSEQ9UL01 958 aa17.19■□□□□ 0.34
CTDSP1-209ENST00000488627 TRAF3IP3Q9Y228 551 aa17.19■□□□□ 0.34
CTDSP1-209ENST00000488627 INSL5Q9Y5Q6 135 aa17.19■□□□□ 0.34
CTDSP1-209ENST00000488627 FAM86C2PA6NEL3 165 aa17.18■□□□□ 0.34
CTDSP1-209ENST00000488627 PRRG1O14668 218 aa17.18■□□□□ 0.34
CTDSP1-209ENST00000488627 EXOC3O60645 756 aa17.18■□□□□ 0.34
CTDSP1-209ENST00000488627 XYLBO75191 536 aa17.18■□□□□ 0.34
CTDSP1-209ENST00000488627 GADD45BO75293 160 aaPredicted RBP17.18■□□□□ 0.34
CTDSP1-209ENST00000488627 DLATP10515 647 aaKnown RBP17.18■□□□□ 0.34
CTDSP1-209ENST00000488627 CPB1P15086 417 aa17.18■□□□□ 0.34
CTDSP1-209ENST00000488627 TMEM31Q5JXX7 168 aa17.18■□□□□ 0.34
CTDSP1-209ENST00000488627 TRAPPC11Q7Z392 1133 aa17.18■□□□□ 0.34
CTDSP1-209ENST00000488627 LIMS2Q7Z4I7 341 aa17.18■□□□□ 0.34
CTDSP1-209ENST00000488627 GUF1Q8N442 669 aaKnown RBP17.18■□□□□ 0.34
CTDSP1-209ENST00000488627 CCDC47Q96A33 483 aaKnown RBP17.18■□□□□ 0.34
CTDSP1-209ENST00000488627 CCDC127Q96BQ5 260 aa17.18■□□□□ 0.34
CTDSP1-209ENST00000488627 ANKRD36BP1Q96IX9 119 aa17.18■□□□□ 0.34
CTDSP1-209ENST00000488627 CGRRF1Q99675 332 aa17.18■□□□□ 0.34
CTDSP1-209ENST00000488627 ZCWPW1Q9H0M4 648 aa17.18■□□□□ 0.34
CTDSP1-209ENST00000488627 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.18■□□□□ 0.341e-20■□□□□ 8.8
CTDSP1-209ENST00000488627 POLIQ9UNA4 740 aa17.18■□□□□ 0.34
CTDSP1-209ENST00000488627 MAPK8IP1Q9UQF2 711 aa17.18■□□□□ 0.34
CTDSP1-209ENST00000488627 CST3P01034 146 aaPredicted RBP17.17■□□□□ 0.34
CTDSP1-209ENST00000488627 TNNC2P02585 160 aa17.17■□□□□ 0.34
CTDSP1-209ENST00000488627 NR3C1P04150 777 aa17.17■□□□□ 0.34
CTDSP1-209ENST00000488627 KRT19P08727 400 aa17.17■□□□□ 0.34
CTDSP1-209ENST00000488627 LAMP2P13473 410 aa17.17■□□□□ 0.34
CTDSP1-209ENST00000488627 FSHRP23945 695 aa17.17■□□□□ 0.34
CTDSP1-209ENST00000488627 CASP4P49662 377 aa17.17■□□□□ 0.34
CTDSP1-209ENST00000488627 CLDN10P78369 228 aa17.17■□□□□ 0.34
CTDSP1-209ENST00000488627 CENPPQ6IPU0 288 aa17.17■□□□□ 0.34
CTDSP1-209ENST00000488627 LRRTM3Q86VH5 581 aa17.17■□□□□ 0.34
CTDSP1-209ENST00000488627 ELOA2Q8IYF1 753 aaPredicted RBP17.17■□□□□ 0.34
CTDSP1-209ENST00000488627 PDCL2Q8N4E4 241 aa17.17■□□□□ 0.34
CTDSP1-209ENST00000488627 ATAD1Q8NBU5 361 aa17.17■□□□□ 0.34
CTDSP1-209ENST00000488627 ITFG1Q8TB96 612 aa17.17■□□□□ 0.34
CTDSP1-209ENST00000488627 PARD3BQ8TEW8 1205 aa17.17■□□□□ 0.34
CTDSP1-209ENST00000488627 PGLYRP2Q96PD5 576 aa17.17■□□□□ 0.34
CTDSP1-209ENST00000488627 FNBP1Q96RU3 617 aa17.17■□□□□ 0.34
CTDSP1-209ENST00000488627 AVENQ9NQS1 362 aaPredicted RBP17.17■□□□□ 0.34
CTDSP1-209ENST00000488627 CHMP5Q9NZZ3 219 aa17.17■□□□□ 0.34
CTDSP1-209ENST00000488627 L1RE1Q9UN81 338 aa17.17■□□□□ 0.34
CTDSP1-209ENST00000488627 PCDHA5Q9Y5H7 936 aa17.17■□□□□ 0.34
CTDSP1-209ENST00000488627 ANK1P16157 1881 aa17.16■□□□□ 0.34
CTDSP1-209ENST00000488627 MTMR11A4FU01 709 aa17.16■□□□□ 0.34
CTDSP1-209ENST00000488627 PRPF40AO75400 957 aaKnown RBP17.16■□□□□ 0.34
CTDSP1-209ENST00000488627 RHOP08100 348 aa17.16■□□□□ 0.34
CTDSP1-209ENST00000488627 TNNI1P19237 187 aa17.16■□□□□ 0.34
CTDSP1-209ENST00000488627 GBP2P32456 591 aaPredicted RBP17.16■□□□□ 0.34
CTDSP1-209ENST00000488627 BFSP1Q12934 665 aa17.16■□□□□ 0.34
CTDSP1-209ENST00000488627 DUSP4Q13115 394 aa17.16■□□□□ 0.34
CTDSP1-209ENST00000488627 NFIL3Q16649 462 aa17.16■□□□□ 0.34
CTDSP1-209ENST00000488627 SOWAHAQ2M3V2 549 aa17.16■□□□□ 0.34
CTDSP1-209ENST00000488627 ZCWPW2Q504Y3 356 aa17.16■□□□□ 0.34
CTDSP1-209ENST00000488627 POTEHQ6S545 545 aa17.16■□□□□ 0.34
CTDSP1-209ENST00000488627 TRIM67Q6ZTA4 783 aa17.16■□□□□ 0.34
CTDSP1-209ENST00000488627 METTL23Q86XA0 190 aa17.16■□□□□ 0.34
CTDSP1-209ENST00000488627 SMYD4Q8IYR2 804 aaPredicted RBP17.16■□□□□ 0.34
CTDSP1-209ENST00000488627 TTC9BQ8N6N2 239 aa17.16■□□□□ 0.34
CTDSP1-209ENST00000488627 ERCC4Q92889 916 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms