RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 MTMR10Q9NXD2 777 aa6.06□□□□□ -1.44
BRCA1-217ENST00000487825 POLKQ9UBT6 870 aa6.06□□□□□ -1.44
BRCA1-217ENST00000487825 NOC2LQ9Y3T9 749 aaKnown RBP6.06□□□□□ -1.44
BRCA1-217ENST00000487825 ECM29Q5VYK3 1845 aa6.05□□□□□ -1.44
BRCA1-217ENST00000487825 YDJCA8MPS7 323 aa6.05□□□□□ -1.44
BRCA1-217ENST00000487825 ENPP3O14638 875 aa6.05□□□□□ -1.44
BRCA1-217ENST00000487825 HOXA3O43365 443 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-217ENST00000487825 IPO13O94829 963 aaKnown RBP6.05□□□□□ -1.44
BRCA1-217ENST00000487825 SEC24DO94855 1032 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-217ENST00000487825 CFBP00751 764 aa6.05□□□□□ -1.44
BRCA1-217ENST00000487825 ADH4P08319 380 aa6.05□□□□□ -1.44
BRCA1-217ENST00000487825 HK1P19367 917 aa6.05□□□□□ -1.44
BRCA1-217ENST00000487825 GYS2P54840 703 aa6.05□□□□□ -1.44
BRCA1-217ENST00000487825 MANFP55145 182 aaKnown RBP6.05□□□□□ -1.44
BRCA1-217ENST00000487825 TOB2Q14106 344 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-217ENST00000487825 C1QL3Q5VWW1 255 aa6.05□□□□□ -1.44
BRCA1-217ENST00000487825 LMBR1LQ6UX01 489 aa6.05□□□□□ -1.44
BRCA1-217ENST00000487825 Q7L0L9 218 aa6.05□□□□□ -1.44
BRCA1-217ENST00000487825 NOP9Q86U38 636 aaKnown RBP6.05□□□□□ -1.44
BRCA1-217ENST00000487825 ST8SIA2Q92186 375 aa6.05□□□□□ -1.44
BRCA1-217ENST00000487825 ERO1AQ96HE7 468 aa6.05□□□□□ -1.44
BRCA1-217ENST00000487825 RTFDC1Q9BY42 306 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-217ENST00000487825 PRDM12Q9H4Q4 367 aa6.05□□□□□ -1.44
BRCA1-217ENST00000487825 GGA3Q9NZ52 723 aa6.05□□□□□ -1.44
BRCA1-217ENST00000487825 KCNG1Q9UIX4 513 aa6.05□□□□□ -1.44
BRCA1-217ENST00000487825 TMPRSS11EQ9UL52 423 aa6.05□□□□□ -1.44
BRCA1-217ENST00000487825 NUMBLQ9Y6R0 609 aa6.05□□□□□ -1.44
BRCA1-217ENST00000487825 OTOFQ9HC10 1997 aa6.04□□□□□ -1.44
BRCA1-217ENST00000487825 NRP1O14786 923 aa6.04□□□□□ -1.44
BRCA1-217ENST00000487825 RNMTO43148 476 aaKnown RBP6.04□□□□□ -1.44
BRCA1-217ENST00000487825 NRP2O60462 931 aa6.04□□□□□ -1.44
BRCA1-217ENST00000487825 MAKP20794 623 aa6.04□□□□□ -1.44
BRCA1-217ENST00000487825 ID4P47928 161 aa6.04□□□□□ -1.44
BRCA1-217ENST00000487825 TRIM25Q14258 630 aaKnown RBP6.04□□□□□ -1.44
BRCA1-217ENST00000487825 SLC4A8Q2Y0W8 1093 aa6.04□□□□□ -1.44
BRCA1-217ENST00000487825 SLC9C1Q4G0N8 1177 aa6.04□□□□□ -1.44
BRCA1-217ENST00000487825 KRTAP5-3Q6L8H2 238 aa6.04□□□□□ -1.44
BRCA1-217ENST00000487825 UBE2Q1Q7Z7E8 422 aa6.04□□□□□ -1.44
BRCA1-217ENST00000487825 LYSMD2Q8IV50 215 aa6.04□□□□□ -1.44
BRCA1-217ENST00000487825 MSL3Q8N5Y2 521 aaKnown RBP6.04□□□□□ -1.44
BRCA1-217ENST00000487825 UBR7Q8N806 425 aa6.04□□□□□ -1.44
BRCA1-217ENST00000487825 SUPT20HQ8NEM7 779 aa6.04□□□□□ -1.44
BRCA1-217ENST00000487825 MDGA1Q8NFP4 955 aa6.04□□□□□ -1.44
BRCA1-217ENST00000487825 CD99L2Q8TCZ2 262 aa6.04□□□□□ -1.44
BRCA1-217ENST00000487825 USP7Q93009 1102 aa6.04□□□□□ -1.44
BRCA1-217ENST00000487825 CRAMP1Q96RY5 1269 aa6.04□□□□□ -1.44
BRCA1-217ENST00000487825 CPPED1Q9BRF8 314 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-217ENST00000487825 TEX13AQ9BXU3 409 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-217ENST00000487825 EVLQ9UI08 416 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-217ENST00000487825 PRSS50Q9UI38 385 aa6.04□□□□□ -1.44
BRCA1-217ENST00000487825 MAPRE3Q9UPY8 281 aa6.04□□□□□ -1.44
BRCA1-217ENST00000487825 NIP7Q9Y221 180 aaKnown RBP eCLIP6.04□□□□□ -1.44
BRCA1-217ENST00000487825 ASTN2O75129 1339 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-217ENST00000487825 MGAMO43451 1857 aa6.03□□□□□ -1.44
BRCA1-217ENST00000487825 GOLGA6L6A8MZA4 724 aa6.03□□□□□ -1.44
BRCA1-217ENST00000487825 NEMP1O14524 444 aa6.03□□□□□ -1.44
BRCA1-217ENST00000487825 A1BGP04217 495 aa6.03□□□□□ -1.44
BRCA1-217ENST00000487825 RPS12P25398 132 aaKnown RBP6.03□□□□□ -1.44
BRCA1-217ENST00000487825 GPR15P49685 360 aa6.03□□□□□ -1.44
BRCA1-217ENST00000487825 NRG3P56975 720 aa6.03□□□□□ -1.44
BRCA1-217ENST00000487825 PLEKHG4Q58EX7 1191 aa6.03□□□□□ -1.44
BRCA1-217ENST00000487825 MOB2Q70IA6 237 aa6.03□□□□□ -1.44
BRCA1-217ENST00000487825 TAS1R1Q7RTX1 841 aa6.03□□□□□ -1.44
BRCA1-217ENST00000487825 APBB1IPQ7Z5R6 666 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-217ENST00000487825 RASSF3Q86WH2 238 aa6.03□□□□□ -1.44
BRCA1-217ENST00000487825 TTC5Q8N0Z6 440 aa6.03□□□□□ -1.44
BRCA1-217ENST00000487825 LARP4BQ92615 738 aaKnown RBP6.03□□□□□ -1.44
BRCA1-217ENST00000487825 HTATIP2Q9BUP3 242 aa6.03□□□□□ -1.44
BRCA1-217ENST00000487825 ENKD1Q9H0I2 346 aa6.03□□□□□ -1.44
BRCA1-217ENST00000487825 ATP6V0A2Q9Y487 856 aa6.03□□□□□ -1.44
BRCA1-217ENST00000487825 NR2E3Q9Y5X4 410 aa6.03□□□□□ -1.44
BRCA1-217ENST00000487825 CACNA1AO00555 2505 aa6.03□□□□□ -1.44
BRCA1-217ENST00000487825 IBTKQ9P2D0 1353 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-217ENST00000487825 NCOR1O75376 2440 aa6.03□□□□□ -1.44
BRCA1-217ENST00000487825 RPTORQ8N122 1335 aa6.02□□□□□ -1.45
BRCA1-217ENST00000487825 A0A1W2PR48 441 aa6.02□□□□□ -1.45
BRCA1-217ENST00000487825 UBE2Q2LH0YL09 131 aa6.02□□□□□ -1.45
BRCA1-217ENST00000487825 PSMD14O00487 310 aa6.02□□□□□ -1.45
BRCA1-217ENST00000487825 PRAMEF4O60810 478 aa6.02□□□□□ -1.45
BRCA1-217ENST00000487825 LPLP06858 475 aa6.02□□□□□ -1.45
BRCA1-217ENST00000487825 DUSP2Q05923 314 aa6.02□□□□□ -1.45
BRCA1-217ENST00000487825 STRN3Q13033 797 aa6.02□□□□□ -1.45
BRCA1-217ENST00000487825 UBE3CQ15386 1083 aa6.02□□□□□ -1.45
BRCA1-217ENST00000487825 LRIT3Q3SXY7 679 aa6.02□□□□□ -1.45
BRCA1-217ENST00000487825 CT83Q5H943 113 aa6.02□□□□□ -1.45
BRCA1-217ENST00000487825 RABL3Q5HYI8 236 aa6.02□□□□□ -1.45
BRCA1-217ENST00000487825 PITRM1Q5JRX3 1037 aa6.02□□□□□ -1.45
BRCA1-217ENST00000487825 DDX46Q7L014 1031 aaKnown RBP6.02□□□□□ -1.45
BRCA1-217ENST00000487825 GLB1L2Q8IW92 636 aa6.02□□□□□ -1.45
BRCA1-217ENST00000487825 OR14C36Q8NHC7 312 aa6.02□□□□□ -1.45
BRCA1-217ENST00000487825 CHFRQ96EP1 664 aa6.02□□□□□ -1.45
BRCA1-217ENST00000487825 IL17RAQ96F46 866 aa6.02□□□□□ -1.45
BRCA1-217ENST00000487825 SNX27Q96L92 541 aa6.02□□□□□ -1.45
BRCA1-217ENST00000487825 MENTQ9BUN1 341 aa6.02□□□□□ -1.45
BRCA1-217ENST00000487825 SLITRK6Q9H5Y7 841 aa6.02□□□□□ -1.45
BRCA1-217ENST00000487825 NRDE2Q9H7Z3 1164 aa6.02□□□□□ -1.45
BRCA1-217ENST00000487825 EDARQ9UNE0 448 aa6.02□□□□□ -1.45
BRCA1-217ENST00000487825 PIEZO1Q92508 2521 aa6.01□□□□□ -1.45
BRCA1-217ENST00000487825 COL4A1P02462 1669 aa6.01□□□□□ -1.45
BRCA1-217ENST00000487825 TCERG1O14776 1098 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms