RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 KCNA1Q09470 495 aa25.52■■□□□ 1.68
PLOD3-215ENST00000487563 DUSP4Q13115 394 aa25.52■■□□□ 1.68
PLOD3-215ENST00000487563 TANGO2Q6ICL3 276 aa25.52■■□□□ 1.68
PLOD3-215ENST00000487563 ELSPBP1Q96BH3 223 aa25.52■■□□□ 1.68
PLOD3-215ENST00000487563 FAM213AQ9BRX8 229 aa25.52■■□□□ 1.68
PLOD3-215ENST00000487563 STRA6Q9BX79 667 aa25.52■■□□□ 1.68
PLOD3-215ENST00000487563 ZFP14Q9HCL3 533 aa25.52■■□□□ 1.68
PLOD3-215ENST00000487563 DSEQ9UL01 958 aa25.52■■□□□ 1.68
PLOD3-215ENST00000487563 KANSL1LA0AUZ9 987 aa25.51■■□□□ 1.67
PLOD3-215ENST00000487563 SPTLC2O15270 562 aa25.51■■□□□ 1.67
PLOD3-215ENST00000487563 ADSSP30520 456 aa25.51■■□□□ 1.67
PLOD3-215ENST00000487563 UBXN2BQ14CS0 331 aa25.51■■□□□ 1.67
PLOD3-215ENST00000487563 FAM78AQ5JUQ0 283 aa25.51■■□□□ 1.67
PLOD3-215ENST00000487563 HSCBQ8IWL3 235 aa25.51■■□□□ 1.67
PLOD3-215ENST00000487563 CCDC65Q8IXS2 484 aa25.51■■□□□ 1.67
PLOD3-215ENST00000487563 LINC00301Q8NCQ3 95 aa25.51■■□□□ 1.67
PLOD3-215ENST00000487563 NOC3LQ8WTT2 800 aaKnown RBP25.51■■□□□ 1.67
PLOD3-215ENST00000487563 SAAL1Q96ER3 474 aa25.51■■□□□ 1.67
PLOD3-215ENST00000487563 PYM1Q9BRP8 204 aaKnown RBP25.51■■□□□ 1.67
PLOD3-215ENST00000487563 PLA2G2FQ9BZM2 168 aa25.51■■□□□ 1.67
PLOD3-215ENST00000487563 SLITRK6Q9H5Y7 841 aa25.51■■□□□ 1.67
PLOD3-215ENST00000487563 MTMR11A4FU01 709 aa25.5■■□□□ 1.67
PLOD3-215ENST00000487563 VNN2O95498 520 aa25.5■■□□□ 1.67
PLOD3-215ENST00000487563 GJA1P17302 382 aa25.5■■□□□ 1.67
PLOD3-215ENST00000487563 TSC2P49815 1807 aa25.5■■□□□ 1.67
PLOD3-215ENST00000487563 CASP5P51878 434 aa25.5■■□□□ 1.67
PLOD3-215ENST00000487563 CRELD2Q6UXH1 353 aaPredicted RBP25.5■■□□□ 1.67
PLOD3-215ENST00000487563 NT5DC4Q86YG4 428 aa25.5■■□□□ 1.67
PLOD3-215ENST00000487563 EFCAB13Q8IY85 973 aa25.5■■□□□ 1.67
PLOD3-215ENST00000487563 NKD2Q969F2 451 aaPredicted RBP25.5■■□□□ 1.67
PLOD3-215ENST00000487563 ZNF560Q96MR9 790 aa25.5■■□□□ 1.67
PLOD3-215ENST00000487563 ASB16Q96NS5 453 aa25.5■■□□□ 1.67
PLOD3-215ENST00000487563 CRISPLD1Q9H336 500 aa25.5■■□□□ 1.67
PLOD3-215ENST00000487563 TFIP11Q9UBB9 837 aaKnown RBP25.5■■□□□ 1.67
PLOD3-215ENST00000487563 SLC27A5Q9Y2P5 690 aa25.5■■□□□ 1.67
PLOD3-215ENST00000487563 CYB561D2O14569 222 aa25.49■■□□□ 1.67
PLOD3-215ENST00000487563 LDHAP00338 332 aaKnown RBP25.49■■□□□ 1.67
PLOD3-215ENST00000487563 CYP11A1P05108 521 aa25.49■■□□□ 1.67
PLOD3-215ENST00000487563 EPHA5P54756 1037 aa25.49■■□□□ 1.67
PLOD3-215ENST00000487563 TFAMQ00059 246 aaKnown RBP25.49■■□□□ 1.67
PLOD3-215ENST00000487563 GRM2Q14416 872 aa25.49■■□□□ 1.67
PLOD3-215ENST00000487563 SV2CQ496J9 727 aa25.49■■□□□ 1.67
PLOD3-215ENST00000487563 FOXD4L5Q5VV16 416 aaPredicted RBP25.49■■□□□ 1.67
PLOD3-215ENST00000487563 CENPPQ6IPU0 288 aa25.49■■□□□ 1.67
PLOD3-215ENST00000487563 POTEHQ6S545 545 aa25.49■■□□□ 1.67
PLOD3-215ENST00000487563 TPRG1Q6ZUI0 275 aa25.49■■□□□ 1.67
PLOD3-215ENST00000487563 STXBP4Q6ZWJ1 553 aa25.49■■□□□ 1.67
PLOD3-215ENST00000487563 THEM5Q8N1Q8 247 aa25.49■■□□□ 1.67
PLOD3-215ENST00000487563 ATAD1Q8NBU5 361 aa25.49■■□□□ 1.67
PLOD3-215ENST00000487563 FOXD4L4Q8WXT5 416 aaPredicted RBP25.49■■□□□ 1.67
PLOD3-215ENST00000487563 SMARCD2Q92925 531 aa25.49■■□□□ 1.67
PLOD3-215ENST00000487563 SNX21Q969T3 373 aa25.49■■□□□ 1.67
PLOD3-215ENST00000487563 TMEM209Q96SK2 561 aa25.49■■□□□ 1.67
PLOD3-215ENST00000487563 LRRC27Q9C0I9 530 aa25.49■■□□□ 1.67
PLOD3-215ENST00000487563 BRD9Q9H8M2 597 aa25.49■■□□□ 1.67
PLOD3-215ENST00000487563 ZFHX2Q9C0A1 2572 aaPredicted RBP25.48■■□□□ 1.67
PLOD3-215ENST00000487563 FRMD3A2A2Y4 597 aa25.48■■□□□ 1.67
PLOD3-215ENST00000487563 PRR23AA6NEV1 266 aa25.48■■□□□ 1.67
PLOD3-215ENST00000487563 PPP6R2O75170 966 aa25.48■■□□□ 1.67
PLOD3-215ENST00000487563 GARTP22102 1010 aa25.48■■□□□ 1.67
PLOD3-215ENST00000487563 FCARP24071 287 aa25.48■■□□□ 1.67
PLOD3-215ENST00000487563 TEAD2Q15562 447 aa25.48■■□□□ 1.67
PLOD3-215ENST00000487563 SLC39A12Q504Y0 691 aa25.48■■□□□ 1.67
PLOD3-215ENST00000487563 ASCL5Q7RTU5 278 aa25.48■■□□□ 1.67
PLOD3-215ENST00000487563 BRSK2Q8IWQ3 736 aa25.48■■□□□ 1.67
PLOD3-215ENST00000487563 OR10T2Q8NGX3 314 aa25.48■■□□□ 1.67
PLOD3-215ENST00000487563 TRMT61BQ9BVS5 477 aaKnown RBP25.48■■□□□ 1.67
PLOD3-215ENST00000487563 BCO2Q9BYV7 579 aa25.48■■□□□ 1.67
PLOD3-215ENST00000487563 TNMDQ9H2S6 317 aa25.48■■□□□ 1.67
PLOD3-215ENST00000487563 TMEM206Q9H813 350 aa25.48■■□□□ 1.67
PLOD3-215ENST00000487563 RBAKQ9NYW8 714 aaPredicted RBP25.48■■□□□ 1.67
PLOD3-215ENST00000487563 DLGAP2Q9P1A6 1054 aa25.48■■□□□ 1.67
PLOD3-215ENST00000487563 NRG2O14511 850 aaPredicted RBP25.47■■□□□ 1.67
PLOD3-215ENST00000487563 LRRN2O75325 713 aa25.47■■□□□ 1.67
PLOD3-215ENST00000487563 MOSPD3O75425 235 aa25.47■■□□□ 1.67
PLOD3-215ENST00000487563 YEATS4O95619 227 aa25.47■■□□□ 1.67
PLOD3-215ENST00000487563 TTC9BQ8N6N2 239 aa25.47■■□□□ 1.67
PLOD3-215ENST00000487563 SHKBP1Q8TBC3 707 aa25.47■■□□□ 1.67
PLOD3-215ENST00000487563 ZSCAN18Q8TBC5 510 aaPredicted RBP25.47■■□□□ 1.67
PLOD3-215ENST00000487563 FAM200AQ8TCP9 573 aa25.47■■□□□ 1.67
PLOD3-215ENST00000487563 DNASE1L2Q92874 299 aa25.47■■□□□ 1.67
PLOD3-215ENST00000487563 ZSWIM3Q96MP5 696 aa25.47■■□□□ 1.67
PLOD3-215ENST00000487563 SEPT5Q99719 369 aaPredicted RBP25.47■■□□□ 1.67
PLOD3-215ENST00000487563 DDX23Q9BUQ8 820 aaKnown RBP25.47■■□□□ 1.67
PLOD3-215ENST00000487563 FGFBP2Q9BYJ0 223 aa25.47■■□□□ 1.67
PLOD3-215ENST00000487563 GPR88Q9GZN0 384 aa25.47■■□□□ 1.67
PLOD3-215ENST00000487563 ASB3Q9Y575 518 aa25.47■■□□□ 1.67
PLOD3-215ENST00000487563 SCN1AP35498 2009 aa25.47■■□□□ 1.67
PLOD3-215ENST00000487563 MIA3Q5JRA6 1907 aa25.47■■□□□ 1.67
PLOD3-215ENST00000487563 COL4A3Q01955 1670 aa25.46■■□□□ 1.67
PLOD3-215ENST00000487563 TCHHQ07283 1943 aa25.46■■□□□ 1.67
PLOD3-215ENST00000487563 A0A1W2PRU2 124 aa25.46■■□□□ 1.67
PLOD3-215ENST00000487563 GOLGA8IPA6NC78 632 aa25.46■■□□□ 1.67
PLOD3-215ENST00000487563 GOLGA8JA6NMD2 632 aa25.46■■□□□ 1.67
PLOD3-215ENST00000487563 KPNA7A9QM74 516 aa25.46■■□□□ 1.67
PLOD3-215ENST00000487563 PRPF6O94906 941 aaKnown RBP25.46■■□□□ 1.67
PLOD3-215ENST00000487563 CD72P21854 359 aa25.46■■□□□ 1.67
PLOD3-215ENST00000487563 PNPLA4P41247 253 aa25.46■■□□□ 1.67
PLOD3-215ENST00000487563 VEPH1Q14D04 833 aa25.46■■□□□ 1.67
PLOD3-215ENST00000487563 ITIH5Q86UX2 942 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms