RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 AS3MTQ9HBK9 375 aa7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 ZNF287Q9HBT7 754 aa7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 MTMR4Q9NYA4 1195 aa7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 CLIP2Q9UDT6 1046 aa7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 PLA2G2DQ9UNK4 145 aa7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 TMX2Q9Y320 296 aa7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 SPTBN4Q9H254 2564 aa7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 DDX60LQ5H9U9 1706 aaKnown RBP7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 NEDD4P46934 1319 aa7.2□□□□□ -1.26
RTFDC1-209ENST00000487211 OTOFQ9HC10 1997 aa7.19□□□□□ -1.26
RTFDC1-209ENST00000487211 CHD6Q8TD26 2715 aa7.19□□□□□ -1.26
RTFDC1-209ENST00000487211 LCHNA4D1U4 455 aa7.19□□□□□ -1.26
RTFDC1-209ENST00000487211 ZNF503-AS2A6NEH8 195 aa7.19□□□□□ -1.26
RTFDC1-209ENST00000487211 TSPY2A6NKD2 308 aa7.19□□□□□ -1.26
RTFDC1-209ENST00000487211 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.19□□□□□ -1.26
RTFDC1-209ENST00000487211 E7EWF7 191 aa7.19□□□□□ -1.26
RTFDC1-209ENST00000487211 TSPY3P0CV98 308 aa7.19□□□□□ -1.26
RTFDC1-209ENST00000487211 TSPY8P0CW00 308 aa7.19□□□□□ -1.26
RTFDC1-209ENST00000487211 CYP2C8P10632 490 aa7.19□□□□□ -1.26
RTFDC1-209ENST00000487211 ITGB5P18084 799 aa7.19□□□□□ -1.26
RTFDC1-209ENST00000487211 NOVP48745 357 aa7.19□□□□□ -1.26
RTFDC1-209ENST00000487211 FNTBP49356 437 aa7.19□□□□□ -1.26
RTFDC1-209ENST00000487211 HERVK_113P62684 666 aa7.19□□□□□ -1.26
RTFDC1-209ENST00000487211 SRSF3P84103 164 aaKnown RBP7.19□□□□□ -1.26
RTFDC1-209ENST00000487211 LRRC32Q14392 662 aa7.19□□□□□ -1.26
RTFDC1-209ENST00000487211 CASC1Q6TDU7 716 aa7.19□□□□□ -1.26
RTFDC1-209ENST00000487211 STOX1Q6ZVD7 989 aa7.19□□□□□ -1.26
RTFDC1-209ENST00000487211 RASSF3Q86WH2 238 aa7.19□□□□□ -1.26
RTFDC1-209ENST00000487211 HIPK4Q8NE63 616 aa7.19□□□□□ -1.26
RTFDC1-209ENST00000487211 ASB15Q8WXK1 588 aa7.19□□□□□ -1.26
RTFDC1-209ENST00000487211 GBP4Q96PP9 640 aa7.19□□□□□ -1.26
RTFDC1-209ENST00000487211 MENTQ9BUN1 341 aa7.19□□□□□ -1.26
RTFDC1-209ENST00000487211 ZDHHC5Q9C0B5 715 aa7.19□□□□□ -1.26
RTFDC1-209ENST00000487211 C14orf119Q9NWQ9 140 aa7.19□□□□□ -1.26
RTFDC1-209ENST00000487211 NYAP2Q9P242 653 aa7.19□□□□□ -1.26
RTFDC1-209ENST00000487211 AGTPBP1Q9UPW5 1226 aa7.19□□□□□ -1.26
RTFDC1-209ENST00000487211 NAV1Q8NEY1 1877 aa7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 F5H6K3 240 aa7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 HRKO00198 91 aa7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 GABRDO14764 452 aa7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 KDM1AO60341 852 aa7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 TLR2O60603 784 aa7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 PEX10O60683 326 aa7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 TMEM253P0C7T8 217 aa7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 PCP11498 1178 aaKnown RBP7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 HOXA7P31268 230 aaPredicted RBP7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 ERVK-21P61565 698 aa7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 CAP1Q01518 475 aa7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 ICA1Q05084 483 aa7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 KLRC3Q07444 240 aa7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 ADCY1Q08828 1119 aa7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 DBPQ10586 325 aaPredicted RBP7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 CRHR2Q13324 411 aa7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 EPHA7Q15375 998 aa7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 OTUD7BQ6GQQ9 843 aa7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 TEPPQ6URK8 271 aa7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 C17orf99Q6UX52 265 aa7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 CD300LDQ6UXZ3 194 aa7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 CATSPERGQ6ZRH7 1159 aa7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 FRMD7Q6ZUT3 714 aa7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 CYB5R4Q7L1T6 521 aa7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 SPICE1Q8N0Z3 855 aa7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 C16orf92Q96LL3 132 aa7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 C12orf42Q96LP6 360 aa7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 DIRC2Q96SL1 478 aa7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 P2RX7Q99572 595 aaKnown RBP7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 RNF41Q9H4P4 317 aaPredicted RBP7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 TOPORSQ9NS56 1045 aaPredicted RBP7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 TCP11L1Q9NUJ3 509 aa7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 SIRT5Q9NXA8 310 aa7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 SAGE1Q9NXZ1 904 aa7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 TMOD4Q9NZQ9 345 aa7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 ARHGAP28Q9P2N2 729 aa7.18□□□□□ -1.26
RTFDC1-209ENST00000487211 K7ESF4 209 aa7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 MARCH6O60337 910 aa7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 TTLL1O95922 423 aa7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 ASGR2P07307 311 aa7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 MYBL2P10244 700 aa7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 JUNBP17275 347 aaPredicted RBP7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 VCAM1P19320 739 aa7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 HSPA4P34932 840 aa7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 NEK2P51955 445 aa7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 USP14P54578 494 aa7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 SCAND1P57086 179 aa7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 ANTXR2P58335 489 aa7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 NKX3-2P78367 333 aa7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 ADCK5Q3MIX3 580 aa7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 CHST3Q7LGC8 479 aa7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 ZC3H18Q86VM9 953 aaKnown RBP7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 FAM26EQ8N5C1 309 aa7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 ESR2Q92731 530 aa7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 CHMP4CQ96CF2 233 aa7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 TMEM47Q9BQJ4 181 aa7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 EPB41L4BQ9H329 900 aa7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 NSUN3Q9H649 340 aaKnown RBP7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 RPAP3Q9H6T3 665 aaPredicted RBP7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 VCPKMTQ9H867 229 aa7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 ZCCHC17Q9NP64 241 aaKnown RBP7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 MTMR10Q9NXD2 777 aa7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 RBPJLQ9UBG7 517 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms