RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 DRICH1Q6PGQ1 229 aaPredicted RBP6.03□□□□□ -1.44
PRPF38A-203ENST00000487160 LIMS2Q7Z4I7 341 aa6.03□□□□□ -1.44
PRPF38A-203ENST00000487160 MICU3Q86XE3 530 aa6.03□□□□□ -1.44
PRPF38A-203ENST00000487160 SLC15A4Q8N697 577 aa6.03□□□□□ -1.44
PRPF38A-203ENST00000487160 DNAJC5GQ8N7S2 189 aa6.03□□□□□ -1.44
PRPF38A-203ENST00000487160 POF1BQ8WVV4 589 aa6.03□□□□□ -1.44
PRPF38A-203ENST00000487160 BRIP1Q9BX63 1249 aa6.03□□□□□ -1.44
PRPF38A-203ENST00000487160 IMPG2Q9BZV3 1241 aa6.03□□□□□ -1.44
PRPF38A-203ENST00000487160 ZNF518BQ9C0D4 1074 aa6.03□□□□□ -1.44
PRPF38A-203ENST00000487160 WDR12Q9GZL7 423 aaKnown RBP6.03□□□□□ -1.44
PRPF38A-203ENST00000487160 TINAGL1Q9GZM7 467 aaPredicted RBP6.03□□□□□ -1.44
PRPF38A-203ENST00000487160 GJB4Q9NTQ9 266 aa6.03□□□□□ -1.44
PRPF38A-203ENST00000487160 SLC30A1Q9Y6M5 507 aa6.03□□□□□ -1.44
PRPF38A-203ENST00000487160 E9PLN8 166 aa6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 GPR42O15529 346 aa6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 TCEA3O75764 348 aa6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 FGF18O76093 207 aa6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 PLATP00750 562 aa6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 GRPP07492 148 aa6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 CKBP12277 381 aa6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 MGAT1P26572 445 aa6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 PPM1AP35813 382 aa6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 IL6STP40189 918 aaPredicted RBP6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 SLC11A2P49281 568 aa6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 PTTG1IPP53801 180 aa6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 RAB32Q13637 225 aa6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 NOMO2Q5JPE7 1267 aa6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 METTL24Q5JXM2 366 aa6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 SPTY2D1Q68D10 685 aaPredicted RBP6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 LMBRD2Q68DH5 695 aaPredicted RBP6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 SYT12Q8IV01 421 aa6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 ZFPM1Q8IX07 1006 aa6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 GSPT2Q8IYD1 628 aaKnown RBP6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 ATP11CQ8NB49 1132 aa6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 ATXN2LQ8WWM7 1075 aaKnown RBP6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 BRI3BPQ8WY22 251 aa6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 DDX17Q92841 729 aaKnown RBP6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 MIEF2Q96C03 454 aa6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 ZC3H10Q96K80 434 aaKnown RBP6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 SNX22Q96L94 193 aa6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 VKORC1Q9BQB6 163 aa6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 CRB3Q9BUF7 120 aa6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 SELENOOQ9BVL4 669 aa6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 COLEC11Q9BWP8 271 aa6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 TLR10Q9BXR5 811 aa6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 XYLT2Q9H1B5 865 aa6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 MRPS18AQ9NVS2 196 aaKnown RBP6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 LRCH1Q9Y2L9 728 aa6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 PLEKHM1Q9Y4G2 1056 aa6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 PCDHGB2Q9Y5G2 931 aa6.02□□□□□ -1.45
PRPF38A-203ENST00000487160 KLRG2A4D1S0 409 aaPredicted RBP6.01□□□□□ -1.45
PRPF38A-203ENST00000487160 PYCARD-AS1I3L0S3 204 aa6.01□□□□□ -1.45
PRPF38A-203ENST00000487160 M0QYG6 137 aa6.01□□□□□ -1.45
PRPF38A-203ENST00000487160 MYO1CO00159 1063 aa6.01□□□□□ -1.45
PRPF38A-203ENST00000487160 KIF20AO95235 890 aa6.01□□□□□ -1.45
PRPF38A-203ENST00000487160 FOSP01100 380 aaPredicted RBP6.01□□□□□ -1.45
PRPF38A-203ENST00000487160 HARSP12081 509 aaKnown RBP6.01□□□□□ -1.45
PRPF38A-203ENST00000487160 MAPK10P53779 464 aa6.01□□□□□ -1.45
PRPF38A-203ENST00000487160 MXRA7P84157 204 aa6.01□□□□□ -1.45
PRPF38A-203ENST00000487160 PMS2P11Q13670 270 aa6.01□□□□□ -1.45
PRPF38A-203ENST00000487160 KRT72Q14CN4 511 aa6.01□□□□□ -1.45
PRPF38A-203ENST00000487160 ARL13BQ3SXY8 428 aa6.01□□□□□ -1.45
PRPF38A-203ENST00000487160 SLC44A4Q53GD3 710 aa6.01□□□□□ -1.45
PRPF38A-203ENST00000487160 UBXN11Q5T124 520 aa6.01□□□□□ -1.45
PRPF38A-203ENST00000487160 C1QL3Q5VWW1 255 aa6.01□□□□□ -1.45
PRPF38A-203ENST00000487160 UNC13DQ70J99 1090 aa6.01□□□□□ -1.45
PRPF38A-203ENST00000487160 POLNQ7Z5Q5 900 aa6.01□□□□□ -1.45
PRPF38A-203ENST00000487160 SGMS1Q86VZ5 419 aa6.01□□□□□ -1.45
PRPF38A-203ENST00000487160 MYLK4Q86YV6 388 aaPredicted RBP6.01□□□□□ -1.45
PRPF38A-203ENST00000487160 MPP5Q8N3R9 675 aa6.01□□□□□ -1.45
PRPF38A-203ENST00000487160 PDPRQ8NCN5 879 aa6.01□□□□□ -1.45
PRPF38A-203ENST00000487160 FAM46DQ8NEK8 389 aa6.01□□□□□ -1.45
PRPF38A-203ENST00000487160 OR56A3Q8NH54 315 aa6.01□□□□□ -1.45
PRPF38A-203ENST00000487160 A1CFQ9NQ94 594 aaKnown RBP6.01□□□□□ -1.45
PRPF38A-203ENST00000487160 TMX2Q9Y320 296 aa6.01□□□□□ -1.45
PRPF38A-203ENST00000487160 A0A087WWL8 130 aa6□□□□□ -1.45
PRPF38A-203ENST00000487160 A0A1W2PPC4 97 aa6□□□□□ -1.45
PRPF38A-203ENST00000487160 LEFTY2O00292 366 aa6□□□□□ -1.45
PRPF38A-203ENST00000487160 PRICKLE3O43900 615 aaPredicted RBP6□□□□□ -1.45
PRPF38A-203ENST00000487160 CHEK2O96017 543 aa6□□□□□ -1.45
PRPF38A-203ENST00000487160 MT-ND5P03915 603 aa6□□□□□ -1.45
PRPF38A-203ENST00000487160 PIM1P11309 404 aaPredicted RBP6□□□□□ -1.45
PRPF38A-203ENST00000487160 FCER1AP12319 257 aa6□□□□□ -1.45
PRPF38A-203ENST00000487160 POU6F2P78424 691 aaPredicted RBP6□□□□□ -1.45
PRPF38A-203ENST00000487160 HHEXQ03014 270 aa6□□□□□ -1.45
PRPF38A-203ENST00000487160 SLFN5Q08AF3 891 aa6□□□□□ -1.45
PRPF38A-203ENST00000487160 TRIM14Q14142 442 aa6□□□□□ -1.45
PRPF38A-203ENST00000487160 ZRSR2Q15696 482 aaKnown RBP6□□□□□ -1.45
PRPF38A-203ENST00000487160 AMOTQ4VCS5 1084 aa6□□□□□ -1.45
PRPF38A-203ENST00000487160 ZFYVE27Q5T4F4 411 aa6□□□□□ -1.45
PRPF38A-203ENST00000487160 DCAF12L1Q5VU92 463 aa6□□□□□ -1.45
PRPF38A-203ENST00000487160 METRNLQ641Q3 311 aa6□□□□□ -1.45
PRPF38A-203ENST00000487160 GLB1LQ6UWU2 654 aa6□□□□□ -1.45
PRPF38A-203ENST00000487160 LCNL1Q6ZST4 164 aa6□□□□□ -1.45
PRPF38A-203ENST00000487160 CIR1Q86X95 450 aaPredicted RBP6□□□□□ -1.45
PRPF38A-203ENST00000487160 ANKRD35Q8N283 1001 aa6□□□□□ -1.45
PRPF38A-203ENST00000487160 NUP133Q8WUM0 1156 aa6□□□□□ -1.45
PRPF38A-203ENST00000487160 IQCDQ96DY2 449 aa6□□□□□ -1.45
PRPF38A-203ENST00000487160 MARS2Q96GW9 593 aaKnown RBP6□□□□□ -1.45
PRPF38A-203ENST00000487160 STK31Q9BXU1 1019 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms