RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 MICAL2O94851 1124 aa26.59■■□□□ 1.85
LIME1-206ENST00000487026 ODC1P11926 461 aa26.59■■□□□ 1.85
LIME1-206ENST00000487026 ATAD1Q8NBU5 361 aa26.59■■□□□ 1.85
LIME1-206ENST00000487026 ZSWIM2Q8NEG5 633 aa26.59■■□□□ 1.85
LIME1-206ENST00000487026 FAM170BA6NMN3 283 aa26.58■■□□□ 1.85
LIME1-206ENST00000487026 CENPPQ6IPU0 288 aa26.58■■□□□ 1.85
LIME1-206ENST00000487026 ARMCX5Q6P1M9 558 aa26.58■■□□□ 1.85
LIME1-206ENST00000487026 C1orf210Q8IVY1 113 aa26.58■■□□□ 1.85
LIME1-206ENST00000487026 HVCN1Q96D96 273 aa26.58■■□□□ 1.85
LIME1-206ENST00000487026 ASB16Q96NS5 453 aa26.58■■□□□ 1.85
LIME1-206ENST00000487026 ZFP14Q9HCL3 533 aa26.58■■□□□ 1.85
LIME1-206ENST00000487026 HEBP1Q9NRV9 189 aa26.58■■□□□ 1.85
LIME1-206ENST00000487026 DPP3Q9NY33 737 aa26.58■■□□□ 1.85
LIME1-206ENST00000487026 K7ELQ4 463 aaPredicted RBP26.57■■□□□ 1.84
LIME1-206ENST00000487026 STX6O43752 255 aa26.57■■□□□ 1.84
LIME1-206ENST00000487026 SOAT2O75908 522 aa26.57■■□□□ 1.84
LIME1-206ENST00000487026 IDEP14735 1019 aa26.57■■□□□ 1.84
LIME1-206ENST00000487026 GAP43P17677 238 aa26.57■■□□□ 1.84
LIME1-206ENST00000487026 VIPR2P41587 438 aa26.57■■□□□ 1.84
LIME1-206ENST00000487026 STAT6P42226 847 aa26.57■■□□□ 1.84
LIME1-206ENST00000487026 EPHA5P54756 1037 aa26.57■■□□□ 1.84
LIME1-206ENST00000487026 MYBPC2Q14324 1141 aa26.57■■□□□ 1.84
LIME1-206ENST00000487026 TEAD2Q15562 447 aa26.57■■□□□ 1.84
LIME1-206ENST00000487026 CCDC73Q6ZRK6 1079 aa26.57■■□□□ 1.84
LIME1-206ENST00000487026 TPRG1Q6ZUI0 275 aa26.57■■□□□ 1.84
LIME1-206ENST00000487026 TTC9BQ8N6N2 239 aa26.57■■□□□ 1.84
LIME1-206ENST00000487026 PDILTQ8N807 584 aa26.57■■□□□ 1.84
LIME1-206ENST00000487026 ACCSQ96QU6 501 aa26.57■■□□□ 1.84
LIME1-206ENST00000487026 LRRC3Q9BY71 257 aa26.57■■□□□ 1.84
LIME1-206ENST00000487026 DNAJC25Q9H1X3 360 aa26.57■■□□□ 1.84
LIME1-206ENST00000487026 SEL1LQ9UBV2 794 aa26.57■■□□□ 1.84
LIME1-206ENST00000487026 C2CD2Q9Y426 696 aa26.57■■□□□ 1.84
LIME1-206ENST00000487026 R4GN57 208 aa26.57■■□□□ 1.84
LIME1-206ENST00000487026 ANK1P16157 1881 aa26.57■■□□□ 1.84
LIME1-206ENST00000487026 MTMR11A4FU01 709 aa26.56■■□□□ 1.84
LIME1-206ENST00000487026 GCNT3O95395 438 aa26.56■■□□□ 1.84
LIME1-206ENST00000487026 CASP5P51878 434 aa26.56■■□□□ 1.84
LIME1-206ENST00000487026 POSTNQ15063 836 aa26.56■■□□□ 1.84
LIME1-206ENST00000487026 L1TD1Q5T7N2 865 aaKnown RBP26.56■■□□□ 1.84
LIME1-206ENST00000487026 EFCAB13Q8IY85 973 aa26.56■■□□□ 1.84
LIME1-206ENST00000487026 OR10T2Q8NGX3 314 aa26.56■■□□□ 1.84
LIME1-206ENST00000487026 SHKBP1Q8TBC3 707 aa26.56■■□□□ 1.84
LIME1-206ENST00000487026 SMARCD2Q92925 531 aa26.56■■□□□ 1.84
LIME1-206ENST00000487026 SAAL1Q96ER3 474 aa26.56■■□□□ 1.84
LIME1-206ENST00000487026 FAM213AQ9BRX8 229 aa26.56■■□□□ 1.84
LIME1-206ENST00000487026 FGFBP2Q9BYJ0 223 aa26.56■■□□□ 1.84
LIME1-206ENST00000487026 ZSCAN16Q9H4T2 348 aaPredicted RBP26.56■■□□□ 1.84
LIME1-206ENST00000487026 SCN1AP35498 2009 aa26.55■■□□□ 1.84
LIME1-206ENST00000487026 CYB561D2O14569 222 aa26.55■■□□□ 1.84
LIME1-206ENST00000487026 ALDH1A3P47895 512 aa26.55■■□□□ 1.84
LIME1-206ENST00000487026 EPHB3P54753 998 aa26.55■■□□□ 1.84
LIME1-206ENST00000487026 WNT7BP56706 349 aa26.55■■□□□ 1.84
LIME1-206ENST00000487026 GPIHBP1Q8IV16 184 aa26.55■■□□□ 1.84
LIME1-206ENST00000487026 LEMD2Q8NC56 503 aa26.55■■□□□ 1.84
LIME1-206ENST00000487026 ZSCAN18Q8TBC5 510 aaPredicted RBP26.55■■□□□ 1.84
LIME1-206ENST00000487026 PYM1Q9BRP8 204 aaKnown RBP26.55■■□□□ 1.84
LIME1-206ENST00000487026 TRMT61BQ9BVS5 477 aaKnown RBP26.55■■□□□ 1.84
LIME1-206ENST00000487026 BRD9Q9H8M2 597 aa26.55■■□□□ 1.84
LIME1-206ENST00000487026 LTB4R2Q9NPC1 389 aa26.55■■□□□ 1.84
LIME1-206ENST00000487026 TFIP11Q9UBB9 837 aaKnown RBP26.55■■□□□ 1.84
LIME1-206ENST00000487026 EXOC7Q9UPT5 735 aa26.55■■□□□ 1.84
LIME1-206ENST00000487026 WDR87Q6ZQQ6 2873 aa26.55■■□□□ 1.84
LIME1-206ENST00000487026 CACNA1IQ9P0X4 2223 aa26.54■■□□□ 1.84
LIME1-206ENST00000487026 A0A1W2PRU2 124 aa26.54■■□□□ 1.84
LIME1-206ENST00000487026 SP9P0CG40 484 aa26.54■■□□□ 1.84
LIME1-206ENST00000487026 PAX3P23760 479 aa26.54■■□□□ 1.84
LIME1-206ENST00000487026 TAF6P49848 677 aa26.54■■□□□ 1.84
LIME1-206ENST00000487026 PLD1Q13393 1074 aa26.54■■□□□ 1.84
LIME1-206ENST00000487026 STK38Q15208 465 aa26.54■■□□□ 1.84
LIME1-206ENST00000487026 SLC39A12Q504Y0 691 aa26.54■■□□□ 1.84
LIME1-206ENST00000487026 VITQ6UXI7 678 aa26.54■■□□□ 1.84
LIME1-206ENST00000487026 TMC8Q8IU68 726 aa26.54■■□□□ 1.84
LIME1-206ENST00000487026 BCO2Q9BYV7 579 aa26.54■■□□□ 1.84
LIME1-206ENST00000487026 SLITRK6Q9H5Y7 841 aa26.54■■□□□ 1.84
LIME1-206ENST00000487026 PANK4Q9NVE7 773 aa26.54■■□□□ 1.84
LIME1-206ENST00000487026 PCDHB13Q9Y5F0 798 aa26.54■■□□□ 1.84
LIME1-206ENST00000487026 CYP11A1P05108 521 aa26.53■■□□□ 1.84
LIME1-206ENST00000487026 TARSP26639 723 aaKnown RBP26.53■■□□□ 1.84
LIME1-206ENST00000487026 GDI1P31150 447 aa26.53■■□□□ 1.84
LIME1-206ENST00000487026 NASPP49321 788 aaPredicted RBP26.53■■□□□ 1.84
LIME1-206ENST00000487026 METTL23Q86XA0 190 aa26.53■■□□□ 1.84
LIME1-206ENST00000487026 MAML2Q8IZL2 1156 aaPredicted RBP26.53■■□□□ 1.84
LIME1-206ENST00000487026 SYCP3Q8IZU3 236 aa26.53■■□□□ 1.84
LIME1-206ENST00000487026 ADSSL1Q8N142 457 aa26.53■■□□□ 1.84
LIME1-206ENST00000487026 KCNG4Q8TDN1 519 aa26.53■■□□□ 1.84
LIME1-206ENST00000487026 BORCS6Q96GS4 357 aa26.53■■□□□ 1.84
LIME1-206ENST00000487026 ZNF334Q9HCZ1 680 aaPredicted RBP26.53■■□□□ 1.84
LIME1-206ENST00000487026 SPATA6Q9NWH7 488 aaPredicted RBP26.53■■□□□ 1.84
LIME1-206ENST00000487026 MORC2Q9Y6X9 1032 aaPredicted RBP26.53■■□□□ 1.84
LIME1-206ENST00000487026 FAM186AA6NE01 2351 aa26.53■■□□□ 1.84
LIME1-206ENST00000487026 GOLGA8IPA6NC78 632 aa26.52■■□□□ 1.84
LIME1-206ENST00000487026 SHISA7A6NL88 538 aa26.52■■□□□ 1.84
LIME1-206ENST00000487026 GOLGA8JA6NMD2 632 aa26.52■■□□□ 1.84
LIME1-206ENST00000487026 NCANO14594 1321 aa26.52■■□□□ 1.84
LIME1-206ENST00000487026 IL18RAPO95256 599 aa26.52■■□□□ 1.84
LIME1-206ENST00000487026 TFAMQ00059 246 aaKnown RBP26.52■■□□□ 1.84
LIME1-206ENST00000487026 POU5F1Q01860 360 aaKnown RBP26.52■■□□□ 1.84
LIME1-206ENST00000487026 MIA3Q5JRA6 1907 aa26.52■■□□□ 1.84
LIME1-206ENST00000487026 STXBP5Q5T5C0 1151 aa26.52■■□□□ 1.84
LIME1-206ENST00000487026 FOXD4L5Q5VV16 416 aaPredicted RBP26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms