RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 ALG6Q9Y672 507 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 SCINQ9Y6U3 715 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 KAT6AQ92794 2004 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 GPR182O15218 404 aa12.39□□□□□ -0.43
PRKCB-207ENST00000486868 ZNF185O15231 689 aa12.39□□□□□ -0.43
PRKCB-207ENST00000486868 NCK2O43639 380 aa12.39□□□□□ -0.43
PRKCB-207ENST00000486868 FKTNO75072 461 aa12.39□□□□□ -0.43
PRKCB-207ENST00000486868 RECQL4O94761 1208 aa12.39□□□□□ -0.43
PRKCB-207ENST00000486868 KRT19P08727 400 aa12.39□□□□□ -0.43
PRKCB-207ENST00000486868 VDRP11473 427 aa12.39□□□□□ -0.43
PRKCB-207ENST00000486868 HSPA6P17066 643 aa12.39□□□□□ -0.43
PRKCB-207ENST00000486868 FGFR4P22455 802 aa12.39□□□□□ -0.43
PRKCB-207ENST00000486868 MMP8P22894 467 aa12.39□□□□□ -0.43
PRKCB-207ENST00000486868 PAX3P23760 479 aa12.39□□□□□ -0.43
PRKCB-207ENST00000486868 CCND3P30281 292 aaPredicted RBP12.39□□□□□ -0.43
PRKCB-207ENST00000486868 POLR2BP30876 1174 aaKnown RBP12.39□□□□□ -0.43
PRKCB-207ENST00000486868 TAP1Q03518 808 aa12.39□□□□□ -0.43
PRKCB-207ENST00000486868 TMEM62Q0P6H9 643 aa12.39□□□□□ -0.43
PRKCB-207ENST00000486868 PTP4A2Q12974 167 aa12.39□□□□□ -0.43
PRKCB-207ENST00000486868 TRIM32Q13049 653 aa12.39□□□□□ -0.43
PRKCB-207ENST00000486868 FAM228AQ86W67 206 aa12.39□□□□□ -0.43
PRKCB-207ENST00000486868 UNC93AQ86WB7 457 aa12.39□□□□□ -0.43
PRKCB-207ENST00000486868 UBL4BQ8N7F7 174 aa12.39□□□□□ -0.43
PRKCB-207ENST00000486868 RAET1EQ8TD07 263 aa12.39□□□□□ -0.43
PRKCB-207ENST00000486868 CD101Q93033 1021 aa12.39□□□□□ -0.43
PRKCB-207ENST00000486868 CYFIP2Q96F07 1278 aa12.39□□□□□ -0.43
PRKCB-207ENST00000486868 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.39□□□□□ -0.43
PRKCB-207ENST00000486868 NUP85Q9BW27 656 aa12.39□□□□□ -0.43
PRKCB-207ENST00000486868 PARD6BQ9BYG5 372 aa12.39□□□□□ -0.43
PRKCB-207ENST00000486868 DNAI2Q9GZS0 605 aa12.39□□□□□ -0.43
PRKCB-207ENST00000486868 ANKZF1Q9H8Y5 726 aa12.39□□□□□ -0.43
PRKCB-207ENST00000486868 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.39□□□□□ -0.43
PRKCB-207ENST00000486868 GINS2Q9Y248 185 aa12.39□□□□□ -0.43
PRKCB-207ENST00000486868 CDY2AQ9Y6F7 541 aa12.39□□□□□ -0.43
PRKCB-207ENST00000486868 V9GYY5 206 aaPredicted RBP12.39□□□□□ -0.43
PRKCB-207ENST00000486868 A0A0U1RQG5 324 aaPredicted RBP12.38□□□□□ -0.43
PRKCB-207ENST00000486868 CCDC66A2RUB6 948 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 CCDC188H7C350 402 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 PIRO00625 290 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 KCNK3O14649 394 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 TLR3O15455 904 aaKnown RBP12.38□□□□□ -0.43
PRKCB-207ENST00000486868 DDX3YO15523 660 aaKnown RBP12.38□□□□□ -0.43
PRKCB-207ENST00000486868 ZNF623O75123 536 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 ERLIN1O75477 346 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 RPS6KA5O75582 802 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 TRPA1O75762 1119 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 WEE2P0C1S8 567 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 ZSCAN20P17040 1043 aaPredicted RBP12.38□□□□□ -0.43
PRKCB-207ENST00000486868 LRPAP1P30533 357 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 MAN1A1P33908 653 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 RAB27AP51159 221 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 RAD23BP54727 409 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 TNNC1P63316 161 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 CAP1Q01518 475 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 CNGA2Q16280 664 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 NAA35Q5VZE5 725 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 DPH6Q7L8W6 267 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 LIMS2Q7Z4I7 341 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 MRPL10Q7Z7H8 261 aaKnown RBP12.38□□□□□ -0.43
PRKCB-207ENST00000486868 DNAAF5Q86Y56 855 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 SLC43A3Q8NBI5 491 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 NOA1Q8NC60 698 aaKnown RBP12.38□□□□□ -0.43
PRKCB-207ENST00000486868 CD99L2Q8TCZ2 262 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 WHAMMQ8TF30 809 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 TMEM176AQ96HP8 235 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 CAPZA3Q96KX2 299 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 ZNF560Q96MR9 790 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 MIS12Q9H081 205 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 PARVAQ9NVD7 372 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 GDAP2Q9NXN4 497 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 ADAM22Q9P0K1 906 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 WDR35Q9P2L0 1181 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 NXF1Q9UBU9 619 aaKnown RBP12.38□□□□□ -0.43
PRKCB-207ENST00000486868 STRIP2Q9ULQ0 834 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 NOC2LQ9Y3T9 749 aaKnown RBP12.38□□□□□ -0.43
PRKCB-207ENST00000486868 IPPQ9Y573 584 aa12.38□□□□□ -0.43
PRKCB-207ENST00000486868 GRIN2DO15399 1336 aa12.37□□□□□ -0.43
PRKCB-207ENST00000486868 SMIM28A0A1B0GU29 152 aa12.37□□□□□ -0.43
PRKCB-207ENST00000486868 MYO1FO00160 1098 aa12.37□□□□□ -0.43
PRKCB-207ENST00000486868 PGRMC1O00264 195 aaKnown RBP12.37□□□□□ -0.43
PRKCB-207ENST00000486868 CHRNA1P02708 482 aa12.37□□□□□ -0.43
PRKCB-207ENST00000486868 SKIP12755 728 aa12.37□□□□□ -0.43
PRKCB-207ENST00000486868 ELNP15502 786 aa12.37□□□□□ -0.43
PRKCB-207ENST00000486868 VEGFBP49765 207 aa12.37□□□□□ -0.43
PRKCB-207ENST00000486868 C9orf57Q5W0N0 161 aa12.37□□□□□ -0.43
PRKCB-207ENST00000486868 SCARA3Q6AZY7 606 aa12.37□□□□□ -0.43
PRKCB-207ENST00000486868 FBXO38Q6PIJ6 1188 aa12.37□□□□□ -0.43
PRKCB-207ENST00000486868 EIF1ADQ8N9N8 165 aaKnown RBP12.37□□□□□ -0.43
PRKCB-207ENST00000486868 SLC4A11Q8NBS3 891 aa12.37□□□□□ -0.43
PRKCB-207ENST00000486868 SMG8Q8ND04 991 aaKnown RBP12.37□□□□□ -0.43
PRKCB-207ENST00000486868 ELMO3Q96BJ8 720 aa12.37□□□□□ -0.43
PRKCB-207ENST00000486868 ZMAT2Q96NC0 199 aaKnown RBP12.37□□□□□ -0.43
PRKCB-207ENST00000486868 PLVAPQ9BX97 442 aa12.37□□□□□ -0.43
PRKCB-207ENST00000486868 NXF3Q9H4D5 531 aaKnown RBP12.37□□□□□ -0.43
PRKCB-207ENST00000486868 SLC38A7Q9NVC3 462 aa12.37□□□□□ -0.43
PRKCB-207ENST00000486868 POLIQ9UNA4 740 aa12.37□□□□□ -0.43
PRKCB-207ENST00000486868 ST3GAL5Q9UNP4 418 aa12.37□□□□□ -0.43
PRKCB-207ENST00000486868 GIT1Q9Y2X7 761 aa12.37□□□□□ -0.43
PRKCB-207ENST00000486868 PCDHA3Q9Y5H8 950 aa12.37□□□□□ -0.43
PRKCB-207ENST00000486868 TCRBV5S1A1TA0A578 114 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms