RNA–Protein interactions for RNA: ENST00000486556.1

TRADD-202, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2 BASIC

Gene TRADD, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-202ENST00000486556 TNNC1P63316 161 aa23.07■■□□□ 1.28
TRADD-202ENST00000486556 SMG8Q8ND04 991 aaKnown RBP23.07■■□□□ 1.28
TRADD-202ENST00000486556 WNT8BQ93098 351 aa23.07■■□□□ 1.28
TRADD-202ENST00000486556 GLT1D1Q96MS3 346 aa23.07■■□□□ 1.28
TRADD-202ENST00000486556 RPS6KC1Q96S38 1066 aa23.07■■□□□ 1.28
TRADD-202ENST00000486556 PSMB7Q99436 277 aa23.07■■□□□ 1.28
TRADD-202ENST00000486556 SELENOOQ9BVL4 669 aa23.07■■□□□ 1.28
TRADD-202ENST00000486556 NUP85Q9BW27 656 aa23.07■■□□□ 1.28
TRADD-202ENST00000486556 PARP2Q9UGN5 583 aa23.07■■□□□ 1.28
TRADD-202ENST00000486556 PACSIN2Q9UNF0 486 aaPredicted RBP23.07■■□□□ 1.28
TRADD-202ENST00000486556 SMIM28A0A1B0GU29 152 aa23.06■■□□□ 1.28
TRADD-202ENST00000486556 PDE2AO00408 941 aaPredicted RBP23.06■■□□□ 1.28
TRADD-202ENST00000486556 CYP3A5P20815 502 aa23.06■■□□□ 1.28
TRADD-202ENST00000486556 GRK4P32298 578 aa23.06■■□□□ 1.28
TRADD-202ENST00000486556 GUCY2FP51841 1108 aa23.06■■□□□ 1.28
TRADD-202ENST00000486556 ZNF394Q53GI3 561 aa23.06■■□□□ 1.28
TRADD-202ENST00000486556 LHX8Q68G74 356 aa23.06■■□□□ 1.28
TRADD-202ENST00000486556 ZNF564Q8TBZ8 553 aaPredicted RBP23.06■■□□□ 1.28
TRADD-202ENST00000486556 ALG6Q9Y672 507 aa23.06■■□□□ 1.28
TRADD-202ENST00000486556 THSD7BQ9C0I4 1608 aa23.06■■□□□ 1.28
TRADD-202ENST00000486556 TLR3O15455 904 aaKnown RBP23.05■■□□□ 1.28
TRADD-202ENST00000486556 CILPO75339 1184 aa23.05■■□□□ 1.28
TRADD-202ENST00000486556 ATF7P17544 494 aaPredicted RBP23.05■■□□□ 1.28
TRADD-202ENST00000486556 THPOP40225 353 aa23.05■■□□□ 1.28
TRADD-202ENST00000486556 CDH8P55286 799 aa23.05■■□□□ 1.28
TRADD-202ENST00000486556 C1QBPQ07021 282 aaKnown RBP23.05■■□□□ 1.28
TRADD-202ENST00000486556 LIN9Q5TKA1 542 aa23.05■■□□□ 1.28
TRADD-202ENST00000486556 MON1BQ7L1V2 547 aa23.05■■□□□ 1.28
TRADD-202ENST00000486556 HACE1Q8IYU2 909 aa23.05■■□□□ 1.28
TRADD-202ENST00000486556 TMEM35BQ8NCS4 154 aa23.05■■□□□ 1.28
TRADD-202ENST00000486556 APOL6Q9BWW8 343 aa23.05■■□□□ 1.28
TRADD-202ENST00000486556 SDCBP2Q9H190 292 aa23.05■■□□□ 1.28
TRADD-202ENST00000486556 GOLPH3Q9H4A6 298 aa23.05■■□□□ 1.28
TRADD-202ENST00000486556 TUBBP07437 444 aa23.05■■□□□ 1.28
TRADD-202ENST00000486556 RAD23BP54727 409 aa23.05■■□□□ 1.28
TRADD-202ENST00000486556 INCA1Q0VD86 236 aa23.05■■□□□ 1.28
TRADD-202ENST00000486556 NFX1Q12986 1120 aaKnown RBP23.05■■□□□ 1.28
TRADD-202ENST00000486556 TMEM176AQ96HP8 235 aa23.05■■□□□ 1.28
TRADD-202ENST00000486556 CXCL16Q9H2A7 254 aa23.05■■□□□ 1.28
TRADD-202ENST00000486556 LHX5Q9H2C1 402 aa23.05■■□□□ 1.28
TRADD-202ENST00000486556 RNF39Q9H2S5 420 aa23.05■■□□□ 1.28
TRADD-202ENST00000486556 SMYD3Q9H7B4 428 aa23.05■■□□□ 1.28
TRADD-202ENST00000486556 ADAM22Q9P0K1 906 aa23.05■■□□□ 1.28
TRADD-202ENST00000486556 KIAA1257Q9ULG3 409 aa23.05■■□□□ 1.28
TRADD-202ENST00000486556 BARX2Q9UMQ3 279 aaPredicted RBP23.05■■□□□ 1.28
TRADD-202ENST00000486556 CEP83Q9Y592 693 aa23.05■■□□□ 1.28
TRADD-202ENST00000486556 KCNK3O14649 394 aa23.04■■□□□ 1.28
TRADD-202ENST00000486556 CAND2O75155 1236 aa23.04■■□□□ 1.28
TRADD-202ENST00000486556 CFHP08603 1231 aa23.04■■□□□ 1.28
TRADD-202ENST00000486556 CTSHP09668 335 aa23.04■■□□□ 1.28
TRADD-202ENST00000486556 CDH5P33151 784 aaPredicted RBP23.04■■□□□ 1.28
TRADD-202ENST00000486556 FAM26DQ5JW98 314 aa23.04■■□□□ 1.28
TRADD-202ENST00000486556 ARRDC4Q8NCT1 418 aa23.04■■□□□ 1.28
TRADD-202ENST00000486556 WHAMMQ8TF30 809 aa23.04■■□□□ 1.28
TRADD-202ENST00000486556 NOD1Q9Y239 953 aa23.04■■□□□ 1.28
TRADD-202ENST00000486556 SQORQ9Y6N5 450 aa23.04■■□□□ 1.28
TRADD-202ENST00000486556 MIF4GDA9UHW6 222 aaKnown RBP23.03■■□□□ 1.28
TRADD-202ENST00000486556 ZSCAN20P17040 1043 aaPredicted RBP23.03■■□□□ 1.28
TRADD-202ENST00000486556 BRD2P25440 801 aaKnown RBP23.03■■□□□ 1.28
TRADD-202ENST00000486556 RAP1GAPP47736 663 aa23.03■■□□□ 1.28
TRADD-202ENST00000486556 C9orf57Q5W0N0 161 aa23.03■■□□□ 1.28
TRADD-202ENST00000486556 TMEM130Q8N3G9 435 aa23.03■■□□□ 1.28
TRADD-202ENST00000486556 SPATA4Q8NEY3 305 aa23.03■■□□□ 1.28
TRADD-202ENST00000486556 MRPL47Q9HD33 250 aaKnown RBP23.03■■□□□ 1.28
TRADD-202ENST00000486556 PIRO00625 290 aa23.03■■□□□ 1.28
TRADD-202ENST00000486556 RRP9O43818 475 aaKnown RBP23.03■■□□□ 1.28
TRADD-202ENST00000486556 PNPLA4P41247 253 aa23.03■■□□□ 1.28
TRADD-202ENST00000486556 MTERF4Q7Z6M4 381 aaKnown RBP23.03■■□□□ 1.28
TRADD-202ENST00000486556 PASD1Q8IV76 773 aa23.03■■□□□ 1.28
TRADD-202ENST00000486556 MMGT1Q8N4V1 131 aa23.03■■□□□ 1.28
TRADD-202ENST00000486556 USP38Q8NB14 1042 aa23.03■■□□□ 1.28
TRADD-202ENST00000486556 SLC4A11Q8NBS3 891 aa23.03■■□□□ 1.28
TRADD-202ENST00000486556 NOA1Q8NC60 698 aaKnown RBP23.03■■□□□ 1.28
TRADD-202ENST00000486556 MSANTD4Q8NCY6 345 aa23.03■■□□□ 1.28
TRADD-202ENST00000486556 TFAP2BQ92481 460 aa23.03■■□□□ 1.28
TRADD-202ENST00000486556 C18orf25Q96B23 403 aaPredicted RBP23.03■■□□□ 1.28
TRADD-202ENST00000486556 ZSWIM1Q9BR11 485 aa23.03■■□□□ 1.28
TRADD-202ENST00000486556 FAM105AQ9NUU6 356 aa23.03■■□□□ 1.28
TRADD-202ENST00000486556 KLK14Q9P0G3 267 aa23.03■■□□□ 1.28
TRADD-202ENST00000486556 TUBGCP4Q9UGJ1 667 aa23.03■■□□□ 1.28
TRADD-202ENST00000486556 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.03■■□□□ 1.28
TRADD-202ENST00000486556 FAM170AA1A519 330 aa23.02■■□□□ 1.28
TRADD-202ENST00000486556 ATMINO43313 823 aaPredicted RBP23.02■■□□□ 1.28
TRADD-202ENST00000486556 VDRP11473 427 aa23.02■■□□□ 1.28
TRADD-202ENST00000486556 MMP8P22894 467 aa23.02■■□□□ 1.28
TRADD-202ENST00000486556 RRM1P23921 792 aa23.02■■□□□ 1.28
TRADD-202ENST00000486556 GLRA4Q5JXX5 417 aa23.02■■□□□ 1.28
TRADD-202ENST00000486556 FBXO47Q5MNV8 452 aa23.02■■□□□ 1.28
TRADD-202ENST00000486556 ACTRT1Q8TDG2 376 aa23.02■■□□□ 1.28
TRADD-202ENST00000486556 TRAIPQ9BWF2 469 aa23.02■■□□□ 1.28
TRADD-202ENST00000486556 ARGLU1Q9NWB6 273 aaPredicted RBP23.02■■□□□ 1.28
TRADD-202ENST00000486556 CALB1P05937 261 aa23.01■■□□□ 1.27
TRADD-202ENST00000486556 CD19P15391 556 aa23.01■■□□□ 1.27
TRADD-202ENST00000486556 H2AFXP16104 143 aaPredicted RBP23.01■■□□□ 1.27
TRADD-202ENST00000486556 DNA2P51530 1060 aa23.01■■□□□ 1.27
TRADD-202ENST00000486556 HTRA3P83110 453 aa23.01■■□□□ 1.27
TRADD-202ENST00000486556 PTP4A2Q12974 167 aa23.01■■□□□ 1.27
TRADD-202ENST00000486556 MESDQ14696 234 aa23.01■■□□□ 1.27
TRADD-202ENST00000486556 ZNF560Q96MR9 790 aa23.01■■□□□ 1.27
TRADD-202ENST00000486556 PARD6BQ9BYG5 372 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms