RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.66■■□□□ 1.06
HPS3-206ENST00000486530 CALB1P05937 261 aa21.65■■□□□ 1.06
HPS3-206ENST00000486530 KRT19P08727 400 aa21.65■■□□□ 1.06
HPS3-206ENST00000486530 MMP8P22894 467 aa21.65■■□□□ 1.06
HPS3-206ENST00000486530 SSTR3P32745 418 aaPredicted RBP21.65■■□□□ 1.06
HPS3-206ENST00000486530 GYS2P54840 703 aa21.65■■□□□ 1.06
HPS3-206ENST00000486530 SREBF2Q12772 1141 aa21.65■■□□□ 1.06
HPS3-206ENST00000486530 CRHR2Q13324 411 aa21.65■■□□□ 1.06
HPS3-206ENST00000486530 CYP1B1Q16678 543 aa21.65■■□□□ 1.06
HPS3-206ENST00000486530 C2CD6Q53TS8 623 aa21.65■■□□□ 1.06
HPS3-206ENST00000486530 ZNF667Q5HYK9 610 aa21.65■■□□□ 1.06
HPS3-206ENST00000486530 JADE1Q6IE81 842 aa21.65■■□□□ 1.06
HPS3-206ENST00000486530 ZNF771Q7L3S4 317 aaPredicted RBP21.65■■□□□ 1.06
HPS3-206ENST00000486530 GOLGA6L1Q8N7Z2 621 aa21.65■■□□□ 1.06
HPS3-206ENST00000486530 TMEM35BQ8NCS4 154 aa21.65■■□□□ 1.06
HPS3-206ENST00000486530 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.65■■□□□ 1.06
HPS3-206ENST00000486530 BCO2Q9BYV7 579 aa21.65■■□□□ 1.06
HPS3-206ENST00000486530 TRIM7Q9C029 511 aa21.65■■□□□ 1.06
HPS3-206ENST00000486530 PARVAQ9NVD7 372 aa21.65■■□□□ 1.06
HPS3-206ENST00000486530 PSD3Q9NYI0 1048 aa21.65■■□□□ 1.06
HPS3-206ENST00000486530 PCYOX1Q9UHG3 505 aa21.65■■□□□ 1.06
HPS3-206ENST00000486530 DAPK3O43293 454 aa21.64■■□□□ 1.06
HPS3-206ENST00000486530 TSPAN1O60635 241 aa21.64■■□□□ 1.06
HPS3-206ENST00000486530 WEE2P0C1S8 567 aa21.64■■□□□ 1.06
HPS3-206ENST00000486530 BRD2P25440 801 aaKnown RBP21.64■■□□□ 1.06
HPS3-206ENST00000486530 CFAP58Q5T655 872 aa21.64■■□□□ 1.06
HPS3-206ENST00000486530 LLGL2Q6P1M3 1020 aa21.64■■□□□ 1.06
HPS3-206ENST00000486530 PHLDB2Q86SQ0 1253 aa21.64■■□□□ 1.06
HPS3-206ENST00000486530 DDX42Q86XP3 938 aaKnown RBP eCLIP21.64■■□□□ 1.06
HPS3-206ENST00000486530 KIAA0319LQ8IZA0 1049 aa21.64■■□□□ 1.06
HPS3-206ENST00000486530 RIN2Q8WYP3 895 aaPredicted RBP21.64■■□□□ 1.06
HPS3-206ENST00000486530 LRRC45Q96CN5 670 aa21.64■■□□□ 1.06
HPS3-206ENST00000486530 ADPGKQ9BRR6 497 aa21.64■■□□□ 1.06
HPS3-206ENST00000486530 TMEM88BA6NKF7 163 aa21.64■■□□□ 1.05
HPS3-206ENST00000486530 GOLGA8KD6RF30 607 aa21.64■■□□□ 1.05
HPS3-206ENST00000486530 ATICP31939 592 aa21.64■■□□□ 1.05
HPS3-206ENST00000486530 CDH5P33151 784 aaPredicted RBP21.64■■□□□ 1.05
HPS3-206ENST00000486530 MAN1A1P33908 653 aa21.64■■□□□ 1.05
HPS3-206ENST00000486530 ZNF394Q53GI3 561 aa21.64■■□□□ 1.05
HPS3-206ENST00000486530 MAGOHBQ96A72 148 aaKnown RBP21.64■■□□□ 1.05
HPS3-206ENST00000486530 ERP44Q9BS26 406 aa21.64■■□□□ 1.05
HPS3-206ENST00000486530 TRIM51Q9BSJ1 452 aa21.64■■□□□ 1.05
HPS3-206ENST00000486530 NXF1Q9UBU9 619 aaKnown RBP21.64■■□□□ 1.05
HPS3-206ENST00000486530 LCMT1Q9UIC8 334 aa21.64■■□□□ 1.05
HPS3-206ENST00000486530 CEP83Q9Y592 693 aa21.64■■□□□ 1.05
HPS3-206ENST00000486530 A6NJR5 290 aa21.63■■□□□ 1.05
HPS3-206ENST00000486530 MEFVO15553 781 aaPredicted RBP21.63■■□□□ 1.05
HPS3-206ENST00000486530 PSTPIP1O43586 416 aa21.63■■□□□ 1.05
HPS3-206ENST00000486530 IGHA2P01877 340 aa21.63■■□□□ 1.05
HPS3-206ENST00000486530 ZNF865P0CJ78 1059 aaPredicted RBP21.63■■□□□ 1.05
HPS3-206ENST00000486530 EIF4BP23588 611 aaKnown RBP21.63■■□□□ 1.05
HPS3-206ENST00000486530 CCL14Q16627 93 aa21.63■■□□□ 1.05
HPS3-206ENST00000486530 DUPD1Q68J44 220 aa21.63■■□□□ 1.05
HPS3-206ENST00000486530 PAXIP1Q6ZW49 1069 aaPredicted RBP21.63■■□□□ 1.05
HPS3-206ENST00000486530 JAMLQ86YT9 394 aa21.63■■□□□ 1.05
HPS3-206ENST00000486530 IQCKQ8N0W5 287 aa21.63■■□□□ 1.05
HPS3-206ENST00000486530 C12orf50Q8NA57 414 aaPredicted RBP21.63■■□□□ 1.05
HPS3-206ENST00000486530 C1orf131Q8NDD1 294 aaKnown RBP21.63■■□□□ 1.05
HPS3-206ENST00000486530 C18orf8Q96DM3 657 aa21.63■■□□□ 1.05
HPS3-206ENST00000486530 HHIPL1Q96JK4 782 aa21.63■■□□□ 1.05
HPS3-206ENST00000486530 ZIM3Q96PE6 472 aa21.63■■□□□ 1.05
HPS3-206ENST00000486530 FAM204AQ9H8W3 233 aa21.63■■□□□ 1.05
HPS3-206ENST00000486530 VRTNQ9H8Y1 702 aa21.63■■□□□ 1.05
HPS3-206ENST00000486530 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.63■■□□□ 1.05
HPS3-206ENST00000486530 POLIQ9UNA4 740 aa21.63■■□□□ 1.05
HPS3-206ENST00000486530 A0A1B0GUA9 196 aa21.62■■□□□ 1.05
HPS3-206ENST00000486530 ITGB3P05106 788 aa21.62■■□□□ 1.05
HPS3-206ENST00000486530 YY1P25490 414 aa21.62■■□□□ 1.05
HPS3-206ENST00000486530 CYP2C19P33261 490 aa21.62■■□□□ 1.05
HPS3-206ENST00000486530 LACTBP83111 547 aaPredicted RBP21.62■■□□□ 1.05
HPS3-206ENST00000486530 CDC42EP1Q00587 391 aa21.62■■□□□ 1.05
HPS3-206ENST00000486530 TMEM132DQ14C87 1099 aa21.62■■□□□ 1.05
HPS3-206ENST00000486530 SLC10A6Q3KNW5 377 aa21.62■■□□□ 1.05
HPS3-206ENST00000486530 ZDHHC14Q8IZN3 488 aa21.62■■□□□ 1.05
HPS3-206ENST00000486530 FEZF2Q8TBJ5 459 aa21.62■■□□□ 1.05
HPS3-206ENST00000486530 MAIP1Q8WWC4 291 aa21.62■■□□□ 1.05
HPS3-206ENST00000486530 NEUROG2Q9H2A3 272 aa21.62■■□□□ 1.05
HPS3-206ENST00000486530 GNEQ9Y223 722 aaKnown RBP21.62■■□□□ 1.05
HPS3-206ENST00000486530 PODXLO00592 558 aa21.62■■□□□ 1.05
HPS3-206ENST00000486530 FSCN2O14926 492 aa21.62■■□□□ 1.05
HPS3-206ENST00000486530 TLR3O15455 904 aaKnown RBP21.62■■□□□ 1.05
HPS3-206ENST00000486530 MED7O43513 233 aa21.62■■□□□ 1.05
HPS3-206ENST00000486530 F2P00734 622 aa21.62■■□□□ 1.05
HPS3-206ENST00000486530 CYP2B6P20813 491 aa21.62■■□□□ 1.05
HPS3-206ENST00000486530 CTGFP29279 349 aa21.62■■□□□ 1.05
HPS3-206ENST00000486530 FNTAP49354 379 aa21.62■■□□□ 1.05
HPS3-206ENST00000486530 DRG2P55039 364 aaKnown RBP21.62■■□□□ 1.05
HPS3-206ENST00000486530 SIX1Q15475 284 aaPredicted RBP21.62■■□□□ 1.05
HPS3-206ENST00000486530 WDR72Q3MJ13 1102 aa21.62■■□□□ 1.05
HPS3-206ENST00000486530 DCAF4L1Q3SXM0 396 aa21.62■■□□□ 1.05
HPS3-206ENST00000486530 OLFML2BQ68BL8 750 aa21.62■■□□□ 1.05
HPS3-206ENST00000486530 CCDC137Q6PK04 289 aaKnown RBP21.62■■□□□ 1.05
HPS3-206ENST00000486530 NT5DC4Q86YG4 428 aa21.62■■□□□ 1.05
HPS3-206ENST00000486530 CXorf38Q8TB03 319 aa21.62■■□□□ 1.05
HPS3-206ENST00000486530 DDX27Q96GQ7 796 aaKnown RBP21.62■■□□□ 1.05
HPS3-206ENST00000486530 ACAP3Q96P50 834 aa21.62■■□□□ 1.05
HPS3-206ENST00000486530 DPH5Q9H2P9 285 aa21.62■■□□□ 1.05
HPS3-206ENST00000486530 IP6K2Q9UHH9 426 aa21.62■■□□□ 1.05
HPS3-206ENST00000486530 C2CD2Q9Y426 696 aa21.62■■□□□ 1.05
HPS3-206ENST00000486530 NRCAMQ92823 1304 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms