RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 ZNF844Q08AG5 666 aa6.79□□□□□ -1.32
LTN1-206ENST00000486427 PLS1Q14651 629 aa6.79□□□□□ -1.32
LTN1-206ENST00000486427 KIF22Q14807 665 aa6.79□□□□□ -1.32
LTN1-206ENST00000486427 CD300EQ496F6 205 aaPredicted RBP6.79□□□□□ -1.32
LTN1-206ENST00000486427 CRB2Q5IJ48 1285 aa6.79□□□□□ -1.32
LTN1-206ENST00000486427 TAPT1Q6NXT6 567 aa6.79□□□□□ -1.32
LTN1-206ENST00000486427 B3GNT9Q6UX72 402 aa6.79□□□□□ -1.32
LTN1-206ENST00000486427 EPM2AIP1Q7L775 607 aaPredicted RBP6.79□□□□□ -1.32
LTN1-206ENST00000486427 PLBD2Q8NHP8 589 aa6.79□□□□□ -1.32
LTN1-206ENST00000486427 TNPO1Q92973 898 aaKnown RBP6.79□□□□□ -1.32
LTN1-206ENST00000486427 CAVIN3Q969G5 261 aa6.79□□□□□ -1.32
LTN1-206ENST00000486427 PTCD3Q96EY7 689 aaKnown RBP6.79□□□□□ -1.32
LTN1-206ENST00000486427 AIFM3Q96NN9 605 aa6.79□□□□□ -1.32
LTN1-206ENST00000486427 CGRRF1Q99675 332 aa6.79□□□□□ -1.32
LTN1-206ENST00000486427 GPR35Q9HC97 309 aa6.79□□□□□ -1.32
LTN1-206ENST00000486427 GNL3LQ9NVN8 582 aaKnown RBP6.79□□□□□ -1.32
LTN1-206ENST00000486427 TBCCD1Q9NVR7 557 aa6.79□□□□□ -1.32
LTN1-206ENST00000486427 PNPOQ9NVS9 261 aa6.79□□□□□ -1.32
LTN1-206ENST00000486427 CFAP97Q9P2B7 532 aa6.79□□□□□ -1.32
LTN1-206ENST00000486427 MAST3O60307 1309 aa6.78□□□□□ -1.32
LTN1-206ENST00000486427 PRAMEF33A0A0G2JMD5 474 aa6.78□□□□□ -1.32
LTN1-206ENST00000486427 CCDC195A0A1B0GUA6 201 aa6.78□□□□□ -1.32
LTN1-206ENST00000486427 H3BUI4 141 aa6.78□□□□□ -1.32
LTN1-206ENST00000486427 PRAMEF10O60809 474 aa6.78□□□□□ -1.32
LTN1-206ENST00000486427 S100BP04271 92 aaPredicted RBP6.78□□□□□ -1.32
LTN1-206ENST00000486427 RARBP10826 455 aa6.78□□□□□ -1.32
LTN1-206ENST00000486427 GATA3P23771 443 aa6.78□□□□□ -1.32
LTN1-206ENST00000486427 PLA2G5P39877 138 aa6.78□□□□□ -1.32
LTN1-206ENST00000486427 ZNF135P52742 658 aaPredicted RBP6.78□□□□□ -1.32
LTN1-206ENST00000486427 POU6F2P78424 691 aaPredicted RBP6.78□□□□□ -1.32
LTN1-206ENST00000486427 BLOC1S1P78537 153 aa6.78□□□□□ -1.32
LTN1-206ENST00000486427 SP5Q6BEB4 398 aaPredicted RBP6.78□□□□□ -1.32
LTN1-206ENST00000486427 TMPRSS9Q7Z410 1059 aa6.78□□□□□ -1.32
LTN1-206ENST00000486427 CLNKQ7Z7G1 428 aa6.78□□□□□ -1.32
LTN1-206ENST00000486427 COLGALT2Q8IYK4 626 aa6.78□□□□□ -1.32
LTN1-206ENST00000486427 CELF5Q8N6W0 485 aaKnown RBP6.78□□□□□ -1.32
LTN1-206ENST00000486427 SSH3Q8TE77 659 aa6.78□□□□□ -1.32
LTN1-206ENST00000486427 C1GALT1C1Q96EU7 318 aa6.78□□□□□ -1.32
LTN1-206ENST00000486427 CASS4Q9NQ75 786 aa6.78□□□□□ -1.32
LTN1-206ENST00000486427 STXBP5LQ9Y2K9 1186 aa6.78□□□□□ -1.32
LTN1-206ENST00000486427 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.78□□□□□ -1.32
LTN1-206ENST00000486427 TRGV11A0A075B6L2 103 aa6.77□□□□□ -1.33
LTN1-206ENST00000486427 PRPF3O43395 683 aaKnown RBP6.77□□□□□ -1.33
LTN1-206ENST00000486427 RHOBTB3O94955 611 aa6.77□□□□□ -1.33
LTN1-206ENST00000486427 ESRRBO95718 433 aa6.77□□□□□ -1.33
LTN1-206ENST00000486427 TYRP1P17643 537 aa6.77□□□□□ -1.33
LTN1-206ENST00000486427 ADRA1BP35368 520 aa6.77□□□□□ -1.33
LTN1-206ENST00000486427 ANXA11P50995 505 aaKnown RBP6.77□□□□□ -1.33
LTN1-206ENST00000486427 PIGFQ07326 219 aa6.77□□□□□ -1.33
LTN1-206ENST00000486427 DYRK1AQ13627 763 aa6.77□□□□□ -1.33
LTN1-206ENST00000486427 HABP2Q14520 560 aaPredicted RBP6.77□□□□□ -1.33
LTN1-206ENST00000486427 CCDC157Q569K6 752 aa6.77□□□□□ -1.33
LTN1-206ENST00000486427 ADGRG5Q8IZF4 528 aa6.77□□□□□ -1.33
LTN1-206ENST00000486427 PPP1R35Q8TAP8 253 aa6.77□□□□□ -1.33
LTN1-206ENST00000486427 SLC35G2Q8TBE7 412 aa6.77□□□□□ -1.33
LTN1-206ENST00000486427 FBXO41Q8TF61 875 aa6.77□□□□□ -1.33
LTN1-206ENST00000486427 SLC35A4Q96G79 324 aa6.77□□□□□ -1.33
LTN1-206ENST00000486427 FAM167AQ96KS9 214 aa6.77□□□□□ -1.33
LTN1-206ENST00000486427 TAAR9Q96RI9 348 aa6.77□□□□□ -1.33
LTN1-206ENST00000486427 TRIB1Q96RU8 372 aa6.77□□□□□ -1.33
LTN1-206ENST00000486427 NMRK2Q9NPI5 230 aa6.77□□□□□ -1.33
LTN1-206ENST00000486427 ETAA1Q9NY74 926 aa6.77□□□□□ -1.33
LTN1-206ENST00000486427 ZDHHC8Q9ULC8 765 aa6.77□□□□□ -1.33
LTN1-206ENST00000486427 NOB1Q9ULX3 412 aaKnown RBP6.77□□□□□ -1.33
LTN1-206ENST00000486427 POLRMTO00411 1230 aaKnown RBP6.76□□□□□ -1.33
LTN1-206ENST00000486427 TOR1BO14657 336 aa6.76□□□□□ -1.33
LTN1-206ENST00000486427 SCGB1D2O95969 90 aa6.76□□□□□ -1.33
LTN1-206ENST00000486427 HSPA6P17066 643 aa6.76□□□□□ -1.33
LTN1-206ENST00000486427 RPS7P62081 194 aaKnown RBP6.76□□□□□ -1.33
LTN1-206ENST00000486427 PURAQ00577 322 aaKnown RBP6.76□□□□□ -1.33
LTN1-206ENST00000486427 FPGSQ05932 587 aa6.76□□□□□ -1.33
LTN1-206ENST00000486427 EXOSC9Q06265 439 aaKnown RBP6.76□□□□□ -1.33
LTN1-206ENST00000486427 MPP3Q13368 585 aa6.76□□□□□ -1.33
LTN1-206ENST00000486427 SF3B3Q15393 1217 aaKnown RBP6.76□□□□□ -1.33
LTN1-206ENST00000486427 NFE2Q16621 373 aaPredicted RBP6.76□□□□□ -1.33
LTN1-206ENST00000486427 SLC30A10Q6XR72 485 aa6.76□□□□□ -1.33
LTN1-206ENST00000486427 Q6ZNX1 250 aa6.76□□□□□ -1.33
LTN1-206ENST00000486427 LNX2Q8N448 690 aa6.76□□□□□ -1.33
LTN1-206ENST00000486427 KLHDC4Q8TBB5 520 aa6.76□□□□□ -1.33
LTN1-206ENST00000486427 POC1BQ8TC44 478 aa6.76□□□□□ -1.33
LTN1-206ENST00000486427 CDK5RAP3Q96JB5 506 aa6.76□□□□□ -1.33
LTN1-206ENST00000486427 ACO2Q99798 780 aaKnown RBP6.76□□□□□ -1.33
LTN1-206ENST00000486427 SMOQ99835 787 aa6.76□□□□□ -1.33
LTN1-206ENST00000486427 AIFM2Q9BRQ8 373 aa6.76□□□□□ -1.33
LTN1-206ENST00000486427 LRFN3Q9BTN0 628 aa6.76□□□□□ -1.33
LTN1-206ENST00000486427 TINAGL1Q9GZM7 467 aaPredicted RBP6.76□□□□□ -1.33
LTN1-206ENST00000486427 ARMT1Q9H993 441 aa6.76□□□□□ -1.33
LTN1-206ENST00000486427 KCTD5Q9NXV2 234 aa6.76□□□□□ -1.33
LTN1-206ENST00000486427 EID1Q9Y6B2 187 aa6.76□□□□□ -1.33
LTN1-206ENST00000486427 SUV39H1O43463 412 aa6.75□□□□□ -1.33
LTN1-206ENST00000486427 KIF20AO95235 890 aa6.75□□□□□ -1.33
LTN1-206ENST00000486427 LMNAP02545 664 aaKnown RBP6.75□□□□□ -1.33
LTN1-206ENST00000486427 MYBP10242 640 aa6.75□□□□□ -1.33
LTN1-206ENST00000486427 HDCP19113 662 aa6.75□□□□□ -1.33
LTN1-206ENST00000486427 OLFML1Q6UWY5 402 aa6.75□□□□□ -1.33
LTN1-206ENST00000486427 DENND1CQ8IV53 801 aa6.75□□□□□ -1.33
LTN1-206ENST00000486427 ANKRD13AQ8IZ07 590 aa6.75□□□□□ -1.33
LTN1-206ENST00000486427 JDP2Q8WYK2 163 aa6.75□□□□□ -1.33
LTN1-206ENST00000486427 SMOC2Q9H3U7 446 aa6.75□□□□□ -1.33
LTN1-206ENST00000486427 SYNPO2LQ9H987 977 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms