RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	KLHDC7A	Q5VTJ3	777 aa		4.91	□□□□□ -1.62
FN1-222	ENST00000485567	TLDC1	Q6P9B6	456 aa		4.91	□□□□□ -1.62
FN1-222	ENST00000485567	XYLT1	Q86Y38	959 aa		4.91	□□□□□ -1.62
FN1-222	ENST00000485567	SP8	Q8IXZ3	490 aa		4.91	□□□□□ -1.62
FN1-222	ENST00000485567	SMAP1	Q8IYB5	467 aa	Predicted RBP	4.91	□□□□□ -1.62
FN1-222	ENST00000485567	TXLNB	Q8N3L3	684 aa		4.91	□□□□□ -1.62
FN1-222	ENST00000485567	DNAJC5G	Q8N7S2	189 aa		4.91	□□□□□ -1.62
FN1-222	ENST00000485567	MDGA1	Q8NFP4	955 aa		4.91	□□□□□ -1.62
FN1-222	ENST00000485567	OR52N2	Q8NGI0	321 aa		4.91	□□□□□ -1.62
FN1-222	ENST00000485567	IPCEF1	Q8WWN9	437 aa	Predicted RBP	4.91	□□□□□ -1.62
FN1-222	ENST00000485567	ST8SIA2	Q92186	375 aa		4.91	□□□□□ -1.62
FN1-222	ENST00000485567	ZNF566	Q969W8	418 aa		4.91	□□□□□ -1.62
FN1-222	ENST00000485567	GDF15	Q99988	308 aa		4.91	□□□□□ -1.62
FN1-222	ENST00000485567	CPPED1	Q9BRF8	314 aa	Predicted RBP	4.91	□□□□□ -1.62
FN1-222	ENST00000485567	PLA2G12B	Q9BX93	195 aa		4.91	□□□□□ -1.62
FN1-222	ENST00000485567	STK33	Q9BYT3	514 aa		4.91	□□□□□ -1.62
FN1-222	ENST00000485567	CHST8	Q9H2A9	424 aa		4.91	□□□□□ -1.62
FN1-222	ENST00000485567	AGO4	Q9HCK5	861 aa	Known RBP	4.91	□□□□□ -1.62
FN1-222	ENST00000485567	TM7SF3	Q9NS93	570 aa		4.91	□□□□□ -1.62
FN1-222	ENST00000485567	PLA2G3	Q9NZ20	509 aa		4.91	□□□□□ -1.62
FN1-222	ENST00000485567	SLC45A2	Q9UMX9	530 aa		4.91	□□□□□ -1.62
FN1-222	ENST00000485567	TMX2	Q9Y320	296 aa		4.91	□□□□□ -1.62
FN1-222	ENST00000485567	MORC2	Q9Y6X9	1032 aa	Predicted RBP	4.91	□□□□□ -1.62
FN1-222	ENST00000485567	ZNF785	A8K8V0	405 aa		4.9	□□□□□ -1.63
FN1-222	ENST00000485567	LAMTOR5	O43504	91 aa		4.9	□□□□□ -1.63
FN1-222	ENST00000485567	IPO13	O94829	963 aa	Known RBP	4.9	□□□□□ -1.63
FN1-222	ENST00000485567	GRP	P07492	148 aa		4.9	□□□□□ -1.63
FN1-222	ENST00000485567	TXN	P10599	105 aa	Known RBP	4.9	□□□□□ -1.63
FN1-222	ENST00000485567	CYP2C9	P11712	490 aa		4.9	□□□□□ -1.63
FN1-222	ENST00000485567	XRCC6	P12956	609 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
FN1-222	ENST00000485567	FDXR	P22570	491 aa		4.9	□□□□□ -1.63
FN1-222	ENST00000485567	ZNF135	P52742	658 aa	Predicted RBP	4.9	□□□□□ -1.63
FN1-222	ENST00000485567	WNT3	P56703	355 aa		4.9	□□□□□ -1.63
FN1-222	ENST00000485567	STARD3	Q14849	445 aa		4.9	□□□□□ -1.63
FN1-222	ENST00000485567	PUM3	Q15397	648 aa	Known RBP	4.9	□□□□□ -1.63
FN1-222	ENST00000485567	CRB2	Q5IJ48	1285 aa		4.9	□□□□□ -1.63
FN1-222	ENST00000485567	FAM160B1	Q5W0V3	765 aa		4.9	□□□□□ -1.63
FN1-222	ENST00000485567	CCDC174	Q6PII3	467 aa		4.9	□□□□□ -1.63
FN1-222	ENST00000485567	UNC13D	Q70J99	1090 aa		4.9	□□□□□ -1.63
FN1-222	ENST00000485567	RNF44	Q7L0R7	432 aa		4.9	□□□□□ -1.63
FN1-222	ENST00000485567	PPP1R32	Q7Z5V6	425 aa		4.9	□□□□□ -1.63
FN1-222	ENST00000485567	TAX1BP1	Q86VP1	789 aa		4.9	□□□□□ -1.63
FN1-222	ENST00000485567	CPXCR1	Q8N123	301 aa		4.9	□□□□□ -1.63
FN1-222	ENST00000485567	VGLL2	Q8N8G2	317 aa		4.9	□□□□□ -1.63
FN1-222	ENST00000485567	ZNF527	Q8NB42	609 aa		4.9	□□□□□ -1.63
FN1-222	ENST00000485567	FANCB	Q8NB91	859 aa		4.9	□□□□□ -1.63
FN1-222	ENST00000485567	CYP2W1	Q8TAV3	490 aa		4.9	□□□□□ -1.63
FN1-222	ENST00000485567	NUP133	Q8WUM0	1156 aa		4.9	□□□□□ -1.63
FN1-222	ENST00000485567	FMNL2	Q96PY5	1086 aa		4.9	□□□□□ -1.63
FN1-222	ENST00000485567	SPATA5L1	Q9BVQ7	753 aa		4.9	□□□□□ -1.63
FN1-222	ENST00000485567	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	4.9	□□□□□ -1.63
FN1-222	ENST00000485567	TINAGL1	Q9GZM7	467 aa	Predicted RBP	4.9	□□□□□ -1.63
FN1-222	ENST00000485567	MEGF9	Q9H1U4	602 aa		4.9	□□□□□ -1.63
FN1-222	ENST00000485567	LUZP4	Q9P127	313 aa		4.9	□□□□□ -1.63
FN1-222	ENST00000485567	XPR1	Q9UBH6	696 aa		4.9	□□□□□ -1.63
FN1-222	ENST00000485567	AGAP1	Q9UPQ3	857 aa		4.9	□□□□□ -1.63
FN1-222	ENST00000485567	CDHR4	A6H8M9	788 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	DRGX	A6NNA5	263 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	MYO1C	O00159	1063 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	PAX4	O43316	350 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	TLR5	O60602	858 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	CSTB	P04080	98 aa	Known RBP	4.89	□□□□□ -1.63
FN1-222	ENST00000485567	PIM1	P11309	404 aa	Predicted RBP	4.89	□□□□□ -1.63
FN1-222	ENST00000485567	CKB	P12277	381 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	IL1R1	P14778	569 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	CHKA	P35790	457 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	VIPR2	P41587	438 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	ALDH9A1	P49189	494 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	CARS	P49589	748 aa	Known RBP	4.89	□□□□□ -1.63
FN1-222	ENST00000485567	PPM1F	P49593	454 aa	Predicted RBP	4.89	□□□□□ -1.63
FN1-222	ENST00000485567	UCP3	P55916	312 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	FSTL1	Q12841	308 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	BLMH	Q13867	455 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	CCDC38	Q502W7	563 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	DCAF17	Q5H9S7	520 aa	Predicted RBP	4.89	□□□□□ -1.63
FN1-222	ENST00000485567	ZNF354C	Q86Y25	554 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	ZFPM1	Q8IX07	1006 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	YAF2	Q8IY57	180 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	SLC15A4	Q8N697	577 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	PCSK9	Q8NBP7	692 aa	Known RBP	4.89	□□□□□ -1.63
FN1-222	ENST00000485567	SLC17A8	Q8NDX2	589 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	TMIE	Q8NEW7	156 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	DNER	Q8NFT8	737 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	OR56A3	Q8NH54	315 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	TBC1D15	Q8TC07	691 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	CCT6B	Q92526	530 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	EVI5L	Q96CN4	794 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	KLHL32	Q96NJ5	620 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	MOGAT1	Q96PD6	335 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	LRRC37B	Q96QE4	947 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	ISCA1	Q9BUE6	129 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	CNPPD1	Q9BV87	410 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	SPON1	Q9HCB6	807 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	XPNPEP3	Q9NQH7	507 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	USP40	Q9NVE5	1235 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	POGK	Q9P215	609 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	CAPN11	Q9UMQ6	739 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567	SLC30A1	Q9Y6M5	507 aa		4.89	□□□□□ -1.63
FN1-222	ENST00000485567		E9PLN8	166 aa		4.88	□□□□□ -1.63
FN1-222	ENST00000485567	SKAP2	O75563	359 aa	Predicted RBP	4.88	□□□□□ -1.63

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