RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 CACNG4Q9UBN1 327 aa10.8□□□□□ -0.68
HDAC6-226ENST00000483656 PAXBP1Q9Y5B6 917 aa10.8□□□□□ -0.68
HDAC6-226ENST00000483656 NME7Q9Y5B8 376 aa10.8□□□□□ -0.68
HDAC6-226ENST00000483656 ATP8B3O60423 1300 aa10.8□□□□□ -0.68
HDAC6-226ENST00000483656 FAM170AA1A519 330 aa10.79□□□□□ -0.68
HDAC6-226ENST00000483656 TMCO5BA8MYB1 307 aa10.79□□□□□ -0.68
HDAC6-226ENST00000483656 DCDC2CA8MYV0 355 aa10.79□□□□□ -0.68
HDAC6-226ENST00000483656 CILPO75339 1184 aa10.79□□□□□ -0.68
HDAC6-226ENST00000483656 CLSTN1O94985 981 aa10.79□□□□□ -0.68
HDAC6-226ENST00000483656 THP07101 528 aa10.79□□□□□ -0.68
HDAC6-226ENST00000483656 H2AFZP0C0S5 128 aa10.79□□□□□ -0.68
HDAC6-226ENST00000483656 IBSPP21815 317 aaPredicted RBP10.79□□□□□ -0.68
HDAC6-226ENST00000483656 CYP2C18P33260 490 aa10.79□□□□□ -0.68
HDAC6-226ENST00000483656 PDE6CP51160 858 aa10.79□□□□□ -0.68
HDAC6-226ENST00000483656 RAD23BP54727 409 aa10.79□□□□□ -0.68
HDAC6-226ENST00000483656 GALCP54803 685 aa10.79□□□□□ -0.68
HDAC6-226ENST00000483656 CCL23P55773 120 aa10.79□□□□□ -0.68
HDAC6-226ENST00000483656 GNG11P61952 73 aa10.79□□□□□ -0.68
HDAC6-226ENST00000483656 INCA1Q0VD86 236 aa10.79□□□□□ -0.68
HDAC6-226ENST00000483656 KIF5AQ12840 1032 aa10.79□□□□□ -0.68
HDAC6-226ENST00000483656 CLEC16AQ2KHT3 1053 aa10.79□□□□□ -0.68
HDAC6-226ENST00000483656 CLLU1OSQ5K130 101 aa10.79□□□□□ -0.68
HDAC6-226ENST00000483656 SLC24A5Q71RS6 500 aa10.79□□□□□ -0.68
HDAC6-226ENST00000483656 H2AFVQ71UI9 128 aa10.79□□□□□ -0.68
HDAC6-226ENST00000483656 ZNF677Q86XU0 584 aa10.79□□□□□ -0.68
HDAC6-226ENST00000483656 SLC4A11Q8NBS3 891 aa10.79□□□□□ -0.68
HDAC6-226ENST00000483656 RNF169Q8NCN4 708 aa10.79□□□□□ -0.68
HDAC6-226ENST00000483656 TFAP2BQ92481 460 aa10.79□□□□□ -0.68
HDAC6-226ENST00000483656 MRPL45Q9BRJ2 306 aaKnown RBP10.79□□□□□ -0.68
HDAC6-226ENST00000483656 FTHL17Q9BXU8 183 aa10.79□□□□□ -0.68
HDAC6-226ENST00000483656 PPP1R12CQ9BZL4 782 aa10.79□□□□□ -0.68
HDAC6-226ENST00000483656 UBN1Q9NPG3 1134 aa10.79□□□□□ -0.68
HDAC6-226ENST00000483656 GDAP2Q9NXN4 497 aa10.79□□□□□ -0.68
HDAC6-226ENST00000483656 HMGXB4Q9UGU5 601 aa10.79□□□□□ -0.68
HDAC6-226ENST00000483656 INTUQ9ULD6 942 aa10.79□□□□□ -0.68
HDAC6-226ENST00000483656 GUCA1BQ9UMX6 200 aa10.79□□□□□ -0.68
HDAC6-226ENST00000483656 ATP11BQ9Y2G3 1177 aa10.79□□□□□ -0.68
HDAC6-226ENST00000483656 TET1Q8NFU7 2136 aa10.78□□□□□ -0.68
HDAC6-226ENST00000483656 BTNL10A8MVZ5 291 aa10.78□□□□□ -0.68
HDAC6-226ENST00000483656 KIF2AO00139 706 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-226ENST00000483656 KRT86O43790 486 aa10.78□□□□□ -0.68
HDAC6-226ENST00000483656 EOMESO95936 686 aa10.78□□□□□ -0.68
HDAC6-226ENST00000483656 POMCP01189 267 aa10.78□□□□□ -0.68
HDAC6-226ENST00000483656 TUBB4AP04350 444 aa10.78□□□□□ -0.68
HDAC6-226ENST00000483656 CYP1A1P04798 512 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-226ENST00000483656 FGFR1P11362 822 aa10.78□□□□□ -0.68
HDAC6-226ENST00000483656 GZMAP12544 262 aa10.78□□□□□ -0.68
HDAC6-226ENST00000483656 UNGP13051 313 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-226ENST00000483656 P4HA1P13674 534 aa10.78□□□□□ -0.68
HDAC6-226ENST00000483656 BRD2P25440 801 aaKnown RBP10.78□□□□□ -0.68
HDAC6-226ENST00000483656 GNA15P30679 374 aa10.78□□□□□ -0.68
HDAC6-226ENST00000483656 SSTR3P32745 418 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-226ENST00000483656 YWHAEP62258 255 aaKnown RBP10.78□□□□□ -0.68
HDAC6-226ENST00000483656 TNNC1P63316 161 aa10.78□□□□□ -0.68
HDAC6-226ENST00000483656 MYO1EQ12965 1108 aa10.78□□□□□ -0.68
HDAC6-226ENST00000483656 ORC1Q13415 861 aa10.78□□□□□ -0.68
HDAC6-226ENST00000483656 SOWAHAQ2M3V2 549 aa10.78□□□□□ -0.68
HDAC6-226ENST00000483656 ZNF394Q53GI3 561 aa10.78□□□□□ -0.68
HDAC6-226ENST00000483656 ZNF569Q5MCW4 686 aa10.78□□□□□ -0.68
HDAC6-226ENST00000483656 CD300LGQ6UXG3 332 aa10.78□□□□□ -0.68
HDAC6-226ENST00000483656 SLC35F6Q8N357 371 aa10.78□□□□□ -0.68
HDAC6-226ENST00000483656 ZNF606Q8WXB4 792 aa10.78□□□□□ -0.68
HDAC6-226ENST00000483656 SEPT8Q92599 483 aa10.78□□□□□ -0.68
HDAC6-226ENST00000483656 ARHGEF26Q96DR7 871 aa10.78□□□□□ -0.68
HDAC6-226ENST00000483656 RPS6KC1Q96S38 1066 aa10.78□□□□□ -0.68
HDAC6-226ENST00000483656 PAAF1Q9BRP4 392 aa10.78□□□□□ -0.68
HDAC6-226ENST00000483656 TSGA10Q9BZW7 698 aa10.78□□□□□ -0.68
HDAC6-226ENST00000483656 MCOLN1Q9GZU1 580 aa10.78□□□□□ -0.68
HDAC6-226ENST00000483656 SEPT11Q9NVA2 429 aaKnown RBP10.78□□□□□ -0.68
HDAC6-226ENST00000483656 SLC38A7Q9NVC3 462 aa10.78□□□□□ -0.68
HDAC6-226ENST00000483656 DNAI1Q9UI46 699 aa10.78□□□□□ -0.68
HDAC6-226ENST00000483656 R3HCC1Q9Y3T6 440 aaKnown RBP10.78□□□□□ -0.68
HDAC6-226ENST00000483656 SNX9Q9Y5X1 595 aa10.78□□□□□ -0.68
HDAC6-226ENST00000483656 SCN5AQ14524 2016 aa10.78□□□□□ -0.68
HDAC6-226ENST00000483656 TANC1Q9C0D5 1861 aa10.78□□□□□ -0.68
HDAC6-226ENST00000483656 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.77□□□□□ -0.69
HDAC6-226ENST00000483656 MACROD2A1Z1Q3 448 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 KPNA7A9QM74 516 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 PODXLO00592 558 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 THAP12O43422 761 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 KIF5CO60282 957 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 B4GALT3O60512 393 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 RTN2O75298 545 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 MOCS3O95396 460 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 FTLP02792 175 aaPredicted RBP10.77□□□□□ -0.69
HDAC6-226ENST00000483656 PAEPP09466 180 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 CLTBP09497 229 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 TMEM253P0C7T8 217 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 ITGB8P26012 769 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 PNPLA4P41247 253 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 TAF6P49848 677 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 CLCNKBP51801 687 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 NDST1P52848 882 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 LILRA4P59901 499 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 DNTTIP2Q5QJE6 756 aaKnown RBP10.77□□□□□ -0.69
HDAC6-226ENST00000483656 ACAD10Q6JQN1 1059 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 FAM43BQ6ZT52 329 aaPredicted RBP10.77□□□□□ -0.69
HDAC6-226ENST00000483656 UBE2Q1Q7Z7E8 422 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 OSTM1Q86WC4 334 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 CRIPAKQ8N1N5 446 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms