RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 SCARF1Q14162 830 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 ZNF697Q5TEC3 545 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 PTPRN2Q92932 1015 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 MXD3Q9BW11 206 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 ROGDIQ9GZN7 287 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 SOS1Q07889 1333 aaPredicted RBP12.1□□□□□ -0.47
TRIM27-205ENST00000481474 PRAMEF22A3QJZ6 481 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 CYP24A1Q07973 514 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 LRP8Q14114 963 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 SNX17Q15036 470 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 NUGGCQ68CJ6 796 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 MAML3Q96JK9 1138 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 COQ7Q99807 217 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 RBAKQ9NYW8 714 aaPredicted RBP12.1□□□□□ -0.47
TRIM27-205ENST00000481474 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.1□□□□□ -0.47
TRIM27-205ENST00000481474 RNF14Q9UBS8 474 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 PNMA6EA0A0J9YXQ4 647 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 NPTXRO95502 500 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 KCNJ5P48544 419 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 RELL1Q8IUW5 271 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 CYP39A1Q9NYL5 469 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 SLC9A2Q9UBY0 812 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 MID2Q9UJV3 735 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 NDRG2Q9UN36 371 aaKnown RBP12.09□□□□□ -0.47
TRIM27-205ENST00000481474 TRIM33Q9UPN9 1127 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 MAPKAPK2P49137 400 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 TBC1D25Q3MII6 688 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 GTPBP2Q9BX10 602 aaKnown RBP12.09□□□□□ -0.47
TRIM27-205ENST00000481474 BHLHE41Q9C0J9 482 aaPredicted RBP12.09□□□□□ -0.47
TRIM27-205ENST00000481474 TRIT1Q9H3H1 467 aaKnown RBP12.09□□□□□ -0.47
TRIM27-205ENST00000481474 ATXN3LQ9H3M9 355 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 OLFML3Q9NRN5 406 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 ZBTB39O15060 712 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 FAM107AO95990 144 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 APOA1P02647 267 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 CYP2D6P10635 497 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 CASP14P31944 242 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 FAM171BQ6P995 826 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 TPGS1Q6ZTW0 290 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 UTS2BQ765I0 119 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 OR10G6Q8NH81 332 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 SNRNP27Q8WVK2 155 aaKnown RBP12.09□□□□□ -0.47
TRIM27-205ENST00000481474 SLITRK1Q96PX8 696 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 PARK7Q99497 189 aaKnown RBP12.09□□□□□ -0.47
TRIM27-205ENST00000481474 PDE11AQ9HCR9 933 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 THG1LQ9NWX6 298 aaKnown RBP12.09□□□□□ -0.47
TRIM27-205ENST00000481474 MDM2Q00987 491 aaPredicted RBP12.09□□□□□ -0.47
TRIM27-205ENST00000481474 BIKQ13323 160 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 CEP55Q53EZ4 464 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 TBC1D9BQ66K14 1250 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 PI16Q6UXB8 463 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 GAL3ST3Q96A11 431 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 MRPS26Q9BYN8 205 aaKnown RBP12.09□□□□□ -0.47
TRIM27-205ENST00000481474 OSBPL2Q9H1P3 480 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 EML4Q9HC35 981 aaKnown RBP12.09□□□□□ -0.47
TRIM27-205ENST00000481474 SH3D21A4FU49 640 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 CLCN1P35523 988 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 ZNF611Q8N823 705 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 ANKFN1Q8N957 763 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 NSUN6Q8TEA1 469 aaKnown RBP12.09□□□□□ -0.47
TRIM27-205ENST00000481474 TOP1MTQ969P6 601 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 SGF29Q96ES7 293 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 PAIP1Q9H074 479 aaKnown RBP12.09□□□□□ -0.47
TRIM27-205ENST00000481474 CARD9Q9H257 536 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 ACAD9Q9H845 621 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 LEMD3Q9Y2U8 911 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 RASA4BC9J798 803 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 CFAP99D6REC4 459 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 TK2O00142 265 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 IFRD1O00458 451 aaPredicted RBP12.09□□□□□ -0.47
TRIM27-205ENST00000481474 APOL1O14791 398 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 RASA4O43374 803 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 APRTP07741 180 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 FGRP09769 529 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 THOP1P52888 689 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 LRRC14Q15048 493 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 DET1Q7L5Y6 550 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 SRLQ86TD4 932 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 DSELQ8IZU8 1212 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 NKD1Q969G9 470 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 FAM81BQ96LP2 452 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 ANGPTL2Q9UKU9 493 aa12.09□□□□□ -0.47
TRIM27-205ENST00000481474 MYO1CO00159 1063 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 PTPN9P43378 593 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 DR1Q01658 176 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 DGKKQ5KSL6 1271 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 C16orf59Q7L2K0 433 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 FAM160B2Q86V87 743 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 MOSPD2Q8NHP6 518 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 SCFD2Q8WU76 684 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 HDHD2Q9H0R4 259 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 TMEM260Q9NX78 707 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 STON1Q9Y6Q2 735 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 MAP3K19Q56UN5 1328 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 NSD2O96028 1365 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 GOLGA4Q13439 2230 aaKnown RBP12.08□□□□□ -0.48
TRIM27-205ENST00000481474 SNAP23O00161 211 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 VPS4BO75351 444 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 FOXR2Q6PJQ5 311 aa12.08□□□□□ -0.48
TRIM27-205ENST00000481474 MCCC2Q9HCC0 563 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms