RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 TTC9BQ8N6N2 239 aa10.68□□□□□ -0.7
CUL3-209ENST00000481135 SMOQ99835 787 aa10.68□□□□□ -0.7
CUL3-209ENST00000481135 CD248Q9HCU0 757 aa10.68□□□□□ -0.7
CUL3-209ENST00000481135 STARD7Q9NQZ5 370 aa10.68□□□□□ -0.7
CUL3-209ENST00000481135 TMX2Q9Y320 296 aa10.68□□□□□ -0.7
CUL3-209ENST00000481135 KRTAP23-1A1A580 65 aa10.67□□□□□ -0.7
CUL3-209ENST00000481135 LEFTY2O00292 366 aa10.67□□□□□ -0.7
CUL3-209ENST00000481135 TRIM24O15164 1050 aa10.67□□□□□ -0.7
CUL3-209ENST00000481135 TPD52L2O43399 206 aaKnown RBP10.67□□□□□ -0.7
CUL3-209ENST00000481135 LDHAP00338 332 aaKnown RBP10.67□□□□□ -0.7
CUL3-209ENST00000481135 APOBEC3AP31941 199 aaPredicted RBP10.67□□□□□ -0.7
CUL3-209ENST00000481135 SCNN1GP51170 649 aa10.67□□□□□ -0.7
CUL3-209ENST00000481135 ZNF543Q08ER8 600 aa10.67□□□□□ -0.7
CUL3-209ENST00000481135 DAG1Q14118 895 aa10.67□□□□□ -0.7
CUL3-209ENST00000481135 PRKD1Q15139 912 aaPredicted RBP10.67□□□□□ -0.7
CUL3-209ENST00000481135 FAM102AQ5T9C2 384 aaPredicted RBP10.67□□□□□ -0.7
CUL3-209ENST00000481135 FAM160B1Q5W0V3 765 aa10.67□□□□□ -0.7
CUL3-209ENST00000481135 FOXR2Q6PJQ5 311 aa10.67□□□□□ -0.7
CUL3-209ENST00000481135 TTLL10Q6ZVT0 673 aa10.67□□□□□ -0.7
CUL3-209ENST00000481135 PDPRQ8NCN5 879 aa10.67□□□□□ -0.7
CUL3-209ENST00000481135 CXorf38Q8TB03 319 aa10.67□□□□□ -0.7
CUL3-209ENST00000481135 MOGAT1Q96PD6 335 aa10.67□□□□□ -0.7
CUL3-209ENST00000481135 CDYLQ9Y232 598 aa10.67□□□□□ -0.7
CUL3-209ENST00000481135 USP15Q9Y4E8 981 aaPredicted RBP10.67□□□□□ -0.7
CUL3-209ENST00000481135 TRIM43BA6NCK2 446 aa10.66□□□□□ -0.7
CUL3-209ENST00000481135 PRSS23O95084 383 aa10.66□□□□□ -0.7
CUL3-209ENST00000481135 PARP1P09874 1014 aaKnown RBP10.66□□□□□ -0.7
CUL3-209ENST00000481135 RRP1BQ14684 758 aaKnown RBP10.66□□□□□ -0.7
CUL3-209ENST00000481135 MORC4Q8TE76 937 aa10.66□□□□□ -0.7
CUL3-209ENST00000481135 TRIM43Q96BQ3 446 aaPredicted RBP10.66□□□□□ -0.7
CUL3-209ENST00000481135 MARS2Q96GW9 593 aaKnown RBP10.66□□□□□ -0.7
CUL3-209ENST00000481135 RIPOR3Q96MK2 946 aa10.66□□□□□ -0.7
CUL3-209ENST00000481135 MED15Q96RN5 788 aa10.66□□□□□ -0.7
CUL3-209ENST00000481135 SERHLQ9NQF3 203 aa10.66□□□□□ -0.7
CUL3-209ENST00000481135 STK32BQ9NY57 414 aa10.66□□□□□ -0.7
CUL3-209ENST00000481135 POM121BA6NF01 834 aa10.65□□□□□ -0.7
CUL3-209ENST00000481135 DNAJB5O75953 348 aa10.65□□□□□ -0.7
CUL3-209ENST00000481135 PIM1P11309 404 aaPredicted RBP10.65□□□□□ -0.7
CUL3-209ENST00000481135 XRCC6P12956 609 aaKnown RBP eCLIP10.65□□□□□ -0.7
CUL3-209ENST00000481135 STT3AP46977 705 aa10.65□□□□□ -0.7
CUL3-209ENST00000481135 RNASE9P60153 205 aaKnown RBP10.65□□□□□ -0.7
CUL3-209ENST00000481135 SLFN5Q08AF3 891 aa10.65□□□□□ -0.7
CUL3-209ENST00000481135 CTBP1Q13363 440 aa10.65□□□□□ -0.7
CUL3-209ENST00000481135 SPICE1Q8N0Z3 855 aa10.65□□□□□ -0.7
CUL3-209ENST00000481135 MPP5Q8N3R9 675 aa10.65□□□□□ -0.7
CUL3-209ENST00000481135 OR56A1Q8NGH5 318 aa10.65□□□□□ -0.7
CUL3-209ENST00000481135 WWC2-AS2Q96NR7 200 aa10.65□□□□□ -0.7
CUL3-209ENST00000481135 SMURF2Q9HAU4 748 aa10.65□□□□□ -0.7
CUL3-209ENST00000481135 A1CFQ9NQ94 594 aaKnown RBP10.65□□□□□ -0.7
CUL3-209ENST00000481135 ST6GALNAC2Q9UJ37 374 aa10.65□□□□□ -0.7
CUL3-209ENST00000481135 SORCS3Q9UPU3 1222 aa10.65□□□□□ -0.7
CUL3-209ENST00000481135 DMTF1Q9Y222 760 aa10.65□□□□□ -0.7
CUL3-209ENST00000481135 FCER1AP12319 257 aa10.64□□□□□ -0.71
CUL3-209ENST00000481135 SLC11A2P49281 568 aa10.64□□□□□ -0.71
CUL3-209ENST00000481135 TCF15Q12870 199 aa10.64□□□□□ -0.71
CUL3-209ENST00000481135 C3orf38Q5JPI3 329 aa10.64□□□□□ -0.71
CUL3-209ENST00000481135 METRNLQ641Q3 311 aa10.64□□□□□ -0.71
CUL3-209ENST00000481135 ZNF585AQ6P3V2 769 aa10.64□□□□□ -0.71
CUL3-209ENST00000481135 GDF7Q7Z4P5 450 aa10.64□□□□□ -0.71
CUL3-209ENST00000481135 CFAP52Q8N1V2 620 aa10.64□□□□□ -0.71
CUL3-209ENST00000481135 CCDC33Q8N5R6 958 aa10.64□□□□□ -0.71
CUL3-209ENST00000481135 OR2C3Q8N628 320 aa10.64□□□□□ -0.71
CUL3-209ENST00000481135 DNAJC5GQ8N7S2 189 aa10.64□□□□□ -0.71
CUL3-209ENST00000481135 FAM46DQ8NEK8 389 aa10.64□□□□□ -0.71
CUL3-209ENST00000481135 DEPTORQ8TB45 409 aa10.64□□□□□ -0.71
CUL3-209ENST00000481135 BRIP1Q9BX63 1249 aa10.64□□□□□ -0.71
CUL3-209ENST00000481135 TLR10Q9BXR5 811 aa10.64□□□□□ -0.71
CUL3-209ENST00000481135 RNF181Q9P0P0 153 aa10.64□□□□□ -0.71
CUL3-209ENST00000481135 COL20A1Q9P218 1284 aa10.64□□□□□ -0.71
CUL3-209ENST00000481135 AGAP1Q9UPQ3 857 aa10.64□□□□□ -0.71
CUL3-209ENST00000481135 NEU2Q9Y3R4 380 aa10.64□□□□□ -0.71
CUL3-209ENST00000481135 DAAM1Q9Y4D1 1078 aa10.64□□□□□ -0.71
CUL3-209ENST00000481135 E9PLN8 166 aa10.63□□□□□ -0.71
CUL3-209ENST00000481135 POLRMTO00411 1230 aaKnown RBP10.63□□□□□ -0.71
CUL3-209ENST00000481135 SCAF4O95104 1147 aaKnown RBP10.63□□□□□ -0.71
CUL3-209ENST00000481135 KIF20AO95235 890 aa10.63□□□□□ -0.71
CUL3-209ENST00000481135 SETSIPP0DME0 302 aa10.63□□□□□ -0.71
CUL3-209ENST00000481135 CYP2C9P11712 490 aa10.63□□□□□ -0.71
CUL3-209ENST00000481135 TNFSF4P23510 183 aa10.63□□□□□ -0.71
CUL3-209ENST00000481135 ACRV1P26436 265 aa10.63□□□□□ -0.71
CUL3-209ENST00000481135 SATB1Q01826 763 aa10.63□□□□□ -0.71
CUL3-209ENST00000481135 SLC15A4Q8N697 577 aa10.63□□□□□ -0.71
CUL3-209ENST00000481135 IPCEF1Q8WWN9 437 aaPredicted RBP10.63□□□□□ -0.71
CUL3-209ENST00000481135 SGCZQ96LD1 299 aa10.63□□□□□ -0.71
CUL3-209ENST00000481135 CDK5RAP1Q96SZ6 601 aaKnown RBP10.63□□□□□ -0.71
CUL3-209ENST00000481135 VKORC1Q9BQB6 163 aa10.63□□□□□ -0.71
CUL3-209ENST00000481135 SELENOOQ9BVL4 669 aa10.63□□□□□ -0.71
CUL3-209ENST00000481135 COLEC11Q9BWP8 271 aa10.63□□□□□ -0.71
CUL3-209ENST00000481135 ARFGAP3Q9NP61 516 aa10.63□□□□□ -0.71
CUL3-209ENST00000481135 TRPM5Q9NZQ8 1165 aa10.63□□□□□ -0.71
CUL3-209ENST00000481135 TAGLN3Q9UI15 199 aa10.63□□□□□ -0.71
CUL3-209ENST00000481135 A0A087WWL8 130 aa10.62□□□□□ -0.71
CUL3-209ENST00000481135 A0A1B0GTW7 788 aa10.62□□□□□ -0.71
CUL3-209ENST00000481135 MBD3L4A6NDZ8 208 aaPredicted RBP10.62□□□□□ -0.71
CUL3-209ENST00000481135 MBD3L3A6NE82 208 aaPredicted RBP10.62□□□□□ -0.71
CUL3-209ENST00000481135 GPANK1O95872 356 aa10.62□□□□□ -0.71
CUL3-209ENST00000481135 UCP3P55916 312 aa10.62□□□□□ -0.71
CUL3-209ENST00000481135 RPS16P62249 146 aaKnown RBP10.62□□□□□ -0.71
CUL3-209ENST00000481135 SDR16C5Q8N3Y7 309 aa10.62□□□□□ -0.71
CUL3-209ENST00000481135 MAML1Q92585 1016 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms