RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 CORO1BQ9BR76 489 aa12.37□□□□□ -0.43
CCM2-213ENST00000480658 IER2Q9BTL4 223 aa12.37□□□□□ -0.43
CCM2-213ENST00000480658 OSBPL6Q9BZF3 934 aa12.37□□□□□ -0.43
CCM2-213ENST00000480658 SEMA4AQ9H3S1 761 aa12.37□□□□□ -0.43
CCM2-213ENST00000480658 USP25Q9UHP3 1055 aa12.37□□□□□ -0.43
CCM2-213ENST00000480658 ZNF318Q5VUA4 2279 aa12.37□□□□□ -0.43
CCM2-213ENST00000480658 KPNA7A9QM74 516 aa12.36□□□□□ -0.43
CCM2-213ENST00000480658 TMEM191BP0C7N4 346 aa12.36□□□□□ -0.43
CCM2-213ENST00000480658 MRE11P49959 708 aa12.36□□□□□ -0.43
CCM2-213ENST00000480658 ASIC1P78348 528 aa12.36□□□□□ -0.43
CCM2-213ENST00000480658 TSPY1Q01534 308 aa12.36□□□□□ -0.43
CCM2-213ENST00000480658 SPAG1Q07617 926 aa12.36□□□□□ -0.43
CCM2-213ENST00000480658 TWF1Q12792 350 aa12.36□□□□□ -0.43
CCM2-213ENST00000480658 NFE2Q16621 373 aaPredicted RBP12.36□□□□□ -0.43
CCM2-213ENST00000480658 ARHGAP15Q53QZ3 475 aa12.36□□□□□ -0.43
CCM2-213ENST00000480658 IER5LQ5T953 404 aa12.36□□□□□ -0.43
CCM2-213ENST00000480658 CWF19L1Q69YN2 538 aaKnown RBP12.36□□□□□ -0.43
CCM2-213ENST00000480658 FAM173BQ6P4H8 233 aa12.36□□□□□ -0.43
CCM2-213ENST00000480658 PARM1Q6UWI2 310 aa12.36□□□□□ -0.43
CCM2-213ENST00000480658 HS2ST1Q7LGA3 356 aa12.36□□□□□ -0.43
CCM2-213ENST00000480658 GPD1LQ8N335 351 aa12.36□□□□□ -0.43
CCM2-213ENST00000480658 PDILTQ8N807 584 aa12.36□□□□□ -0.43
CCM2-213ENST00000480658 TMEM105Q8N8V8 129 aa12.36□□□□□ -0.43
CCM2-213ENST00000480658 GPR152Q8TDT2 470 aa12.36□□□□□ -0.43
CCM2-213ENST00000480658 FGF14Q92915 247 aa12.36□□□□□ -0.43
CCM2-213ENST00000480658 IRF7Q92985 503 aa12.36□□□□□ -0.43
CCM2-213ENST00000480658 ANKRD36BP1Q96IX9 119 aa12.36□□□□□ -0.43
CCM2-213ENST00000480658 FAM213AQ9BRX8 229 aa12.36□□□□□ -0.43
CCM2-213ENST00000480658 TRIM9Q9C026 710 aa12.36□□□□□ -0.43
CCM2-213ENST00000480658 TBC1D17Q9HA65 648 aa12.36□□□□□ -0.43
CCM2-213ENST00000480658 ZFP14Q9HCL3 533 aa12.36□□□□□ -0.43
CCM2-213ENST00000480658 FOXD4L1Q9NU39 408 aa12.36□□□□□ -0.43
CCM2-213ENST00000480658 SIT1Q9Y3P8 196 aa12.36□□□□□ -0.43
CCM2-213ENST00000480658 YIPF1Q9Y548 306 aa12.36□□□□□ -0.43
CCM2-213ENST00000480658 PVALEFA0A1B0GWK0 134 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 ZNF233A6NK53 670 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 SOBPA7XYQ1 873 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 ANKRD63C9JTQ0 380 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 PROB1E7EW31 1015 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 CYB561D2O14569 222 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 HUS1O60921 280 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 KIF20AO95235 890 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 PDGFBP01127 241 aaPredicted RBP12.35□□□□□ -0.43
CCM2-213ENST00000480658 TNNC2P02585 160 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 GLULP15104 373 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 CDC25CP30307 473 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 ADSSP30520 456 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 MLLT6P55198 1093 aaPredicted RBP12.35□□□□□ -0.43
CCM2-213ENST00000480658 STARD6P59095 220 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 MYL7Q01449 175 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 MLF2Q15773 248 aaPredicted RBP12.35□□□□□ -0.43
CCM2-213ENST00000480658 E2F4Q16254 413 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 TAF12Q16514 161 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 PRSS36Q5K4E3 855 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 ZBTB41Q5SVQ8 909 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 RNF19BQ6ZMZ0 732 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 UNC13DQ70J99 1090 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 DPH6Q7L8W6 267 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 ITFG1Q8TB96 612 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 RSAD2Q8WXG1 361 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 SMARCD2Q92925 531 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 PSMG2Q969U7 264 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 DHX58Q96C10 678 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 C7orf25Q9BPX7 421 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 BCO2Q9BYV7 579 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 TRPV4Q9HBA0 871 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 ABCB6Q9NP58 842 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 TRPV5Q9NQA5 729 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 HCFC1R1Q9NWW0 138 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 CA14Q9ULX7 337 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 TRIOO75962 3097 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 MUC6Q6W4X9 2439 aa12.35□□□□□ -0.43
CCM2-213ENST00000480658 KANSL1LA0AUZ9 987 aa12.34□□□□□ -0.43
CCM2-213ENST00000480658 MAN2B1O00754 1011 aa12.34□□□□□ -0.43
CCM2-213ENST00000480658 NARSO43776 548 aaKnown RBP12.34□□□□□ -0.43
CCM2-213ENST00000480658 PSMC3P17980 439 aa12.34□□□□□ -0.43
CCM2-213ENST00000480658 DDX6P26196 483 aaKnown RBP eCLIP12.34□□□□□ -0.43
CCM2-213ENST00000480658 PCSK1P29120 753 aa12.34□□□□□ -0.43
CCM2-213ENST00000480658 WEE1P30291 646 aa12.34□□□□□ -0.43
CCM2-213ENST00000480658 NBL1P41271 181 aa12.34□□□□□ -0.43
CCM2-213ENST00000480658 LHX1P48742 406 aa12.34□□□□□ -0.43
CCM2-213ENST00000480658 KRT85P78386 507 aa12.34□□□□□ -0.43
CCM2-213ENST00000480658 RBP5P82980 135 aa12.34□□□□□ -0.43
CCM2-213ENST00000480658 TFAMQ00059 246 aaKnown RBP12.34□□□□□ -0.43
CCM2-213ENST00000480658 PPP2R5DQ14738 602 aa12.34□□□□□ -0.43
CCM2-213ENST00000480658 MAPRE1Q15691 268 aaKnown RBP12.34□□□□□ -0.43
CCM2-213ENST00000480658 FAM26FQ5R3K3 315 aa12.34□□□□□ -0.43
CCM2-213ENST00000480658 CENPPQ6IPU0 288 aa12.34□□□□□ -0.43
CCM2-213ENST00000480658 CRELD2Q6UXH1 353 aaPredicted RBP12.34□□□□□ -0.43
CCM2-213ENST00000480658 ZNF852Q6ZMS4 543 aa12.34□□□□□ -0.43
CCM2-213ENST00000480658 ALYREFQ86V81 257 aaKnown RBP12.34□□□□□ -0.43
CCM2-213ENST00000480658 WDR49Q8IV35 697 aa12.34□□□□□ -0.43
CCM2-213ENST00000480658 TOP6BLQ8N6T0 577 aa12.34□□□□□ -0.43
CCM2-213ENST00000480658 DTWD2Q8NBA8 298 aa12.34□□□□□ -0.43
CCM2-213ENST00000480658 PJA1Q8NG27 643 aa12.34□□□□□ -0.43
CCM2-213ENST00000480658 LEO1Q8WVC0 666 aaPredicted RBP12.34□□□□□ -0.43
CCM2-213ENST00000480658 CCDC47Q96A33 483 aaKnown RBP12.34□□□□□ -0.43
CCM2-213ENST00000480658 CEP295NLQ96MC4 621 aa12.34□□□□□ -0.43
CCM2-213ENST00000480658 TRMT61BQ9BVS5 477 aaKnown RBP12.34□□□□□ -0.43
CCM2-213ENST00000480658 ZCWPW1Q9H0M4 648 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms