RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 PDGFDQ9GZP0 370 aaPredicted RBP10.74□□□□□ -0.69
COMMD4-203ENST00000480484 PITPNM2Q9BZ72 1349 aa10.74□□□□□ -0.69
COMMD4-203ENST00000480484 NVLO15381 856 aaKnown RBP10.74□□□□□ -0.69
COMMD4-203ENST00000480484 THAP12O43422 761 aa10.74□□□□□ -0.69
COMMD4-203ENST00000480484 CHMP2AO43633 222 aa10.74□□□□□ -0.69
COMMD4-203ENST00000480484 SPAG7O75391 227 aa10.74□□□□□ -0.69
COMMD4-203ENST00000480484 MZF1P28698 734 aaPredicted RBP10.74□□□□□ -0.69
COMMD4-203ENST00000480484 CHKAP35790 457 aa10.74□□□□□ -0.69
COMMD4-203ENST00000480484 PPM1FP49593 454 aaPredicted RBP10.74□□□□□ -0.69
COMMD4-203ENST00000480484 CLDN10P78369 228 aa10.74□□□□□ -0.69
COMMD4-203ENST00000480484 PPATQ06203 517 aa10.74□□□□□ -0.69
COMMD4-203ENST00000480484 DRAP1Q14919 205 aaPredicted RBP10.74□□□□□ -0.69
COMMD4-203ENST00000480484 COL19A1Q14993 1142 aa10.74□□□□□ -0.69
COMMD4-203ENST00000480484 MTFR1Q15390 333 aa10.74□□□□□ -0.69
COMMD4-203ENST00000480484 RNF43Q68DV7 783 aa10.74□□□□□ -0.69
COMMD4-203ENST00000480484 NSMFQ6X4W1 530 aa10.74□□□□□ -0.69
COMMD4-203ENST00000480484 ARHGEF18Q6ZSZ5 1173 aa10.74□□□□□ -0.69
COMMD4-203ENST00000480484 CATSPER3Q86XQ3 398 aa10.74□□□□□ -0.69
COMMD4-203ENST00000480484 AGGF1Q8N302 714 aaeCLIP10.74□□□□□ -0.69
COMMD4-203ENST00000480484 ASAP3Q8TDY4 903 aa10.74□□□□□ -0.69
COMMD4-203ENST00000480484 FGD4Q96M96 766 aa10.74□□□□□ -0.69
COMMD4-203ENST00000480484 ROPN1BQ9BZX4 212 aaPredicted RBP10.74□□□□□ -0.69
COMMD4-203ENST00000480484 ROPN1Q9HAT0 212 aaPredicted RBP10.74□□□□□ -0.69
COMMD4-203ENST00000480484 WDR35Q9P2L0 1181 aa10.74□□□□□ -0.69
COMMD4-203ENST00000480484 SCOCQ9UIL1 159 aa10.74□□□□□ -0.69
COMMD4-203ENST00000480484 PCDHA1Q9Y5I3 950 aa10.74□□□□□ -0.69
COMMD4-203ENST00000480484 PASKQ96RG2 1323 aa10.74□□□□□ -0.69
COMMD4-203ENST00000480484 RNF8O76064 485 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 CHRNA5P30532 468 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 FOXN2P32314 431 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 SLC5A9Q2M3M2 681 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 PRR16Q569H4 304 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 TNFAIP8L3Q5GJ75 292 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 FRMD5Q7Z6J6 570 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 PHC3Q8NDX5 983 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 LRRC8CQ8TDW0 803 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 LRMDAQ9H2I8 198 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 DENND2DQ9H6A0 471 aaPredicted RBP10.73□□□□□ -0.69
COMMD4-203ENST00000480484 SLCO1B3Q9NPD5 702 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.73□□□□□ -0.69
COMMD4-203ENST00000480484 CHKBQ9Y259 395 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 SYNGAP1Q96PV0 1343 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 A0A1W2PRQ8 180 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 CTHP32929 405 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 SOX5P35711 763 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 SKIV2L2P42285 1042 aaKnown RBP10.73□□□□□ -0.69
COMMD4-203ENST00000480484 DLG4P78352 724 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 EDRF1Q3B7T1 1238 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 ZC3H12AQ5D1E8 599 aaKnown RBP10.73□□□□□ -0.69
COMMD4-203ENST00000480484 HHIPL2Q6UWX4 724 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 ZNF713Q8N859 430 aaPredicted RBP10.73□□□□□ -0.69
COMMD4-203ENST00000480484 C1orf54Q8WWF1 131 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 MAGEB18Q96M61 343 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 SERPINB12Q96P63 405 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 GORASP1Q9BQQ3 440 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 NGRNQ9NPE2 291 aaKnown RBP10.73□□□□□ -0.69
COMMD4-203ENST00000480484 NMRK1Q9NWW6 199 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 DNAJC12Q9UKB3 198 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 TAC1P20366 129 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 SERPINB3P29508 390 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 COILP38432 576 aaPredicted RBP10.73□□□□□ -0.69
COMMD4-203ENST00000480484 POLGP54098 1239 aaPredicted RBP10.73□□□□□ -0.69
COMMD4-203ENST00000480484 JAM2P57087 298 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 STRN3Q13033 797 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 CUL3Q13618 768 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 LBRQ14739 615 aaKnown RBP10.73□□□□□ -0.69
COMMD4-203ENST00000480484 KNOP1Q1ED39 458 aaKnown RBP10.73□□□□□ -0.69
COMMD4-203ENST00000480484 CERKLQ49MI3 558 aaPredicted RBP10.73□□□□□ -0.69
COMMD4-203ENST00000480484 SLFN13Q68D06 897 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 MTHFD1LQ6UB35 978 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.73□□□□□ -0.69
COMMD4-203ENST00000480484 DTX3LQ8TDB6 740 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 KIFAP3Q92845 792 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 ART4Q93070 314 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 MTUS1Q9ULD2 1270 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 NENFQ9UMX5 172 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 ASB3Q9Y575 518 aa10.73□□□□□ -0.69
COMMD4-203ENST00000480484 GREB1LQ9C091 1923 aaPredicted RBP10.72□□□□□ -0.69
COMMD4-203ENST00000480484 GSTTP1A0A1W2PQM5 241 aa10.72□□□□□ -0.69
COMMD4-203ENST00000480484 EML1O00423 815 aa10.72□□□□□ -0.69
COMMD4-203ENST00000480484 MAPK13O15264 365 aa10.72□□□□□ -0.69
COMMD4-203ENST00000480484 AKAP10O43572 662 aa10.72□□□□□ -0.69
COMMD4-203ENST00000480484 ECEL1O95672 775 aa10.72□□□□□ -0.69
COMMD4-203ENST00000480484 DLATP10515 647 aaKnown RBP10.72□□□□□ -0.69
COMMD4-203ENST00000480484 PYGMP11217 842 aa10.72□□□□□ -0.69
COMMD4-203ENST00000480484 ACADSP16219 412 aa10.72□□□□□ -0.69
COMMD4-203ENST00000480484 IL9RQ01113 521 aa10.72□□□□□ -0.69
COMMD4-203ENST00000480484 TMED2Q15363 201 aa10.72□□□□□ -0.69
COMMD4-203ENST00000480484 PARP6Q2NL67 630 aa10.72□□□□□ -0.69
COMMD4-203ENST00000480484 TBC1D25Q3MII6 688 aa10.72□□□□□ -0.69
COMMD4-203ENST00000480484 EPC2Q52LR7 807 aa10.72□□□□□ -0.69
COMMD4-203ENST00000480484 FOXR2Q6PJQ5 311 aa10.72□□□□□ -0.69
COMMD4-203ENST00000480484 ANKS3Q6ZW76 656 aa10.72□□□□□ -0.69
COMMD4-203ENST00000480484 TRMT10CQ7L0Y3 403 aaKnown RBP10.72□□□□□ -0.69
COMMD4-203ENST00000480484 NDUFAF2Q8N183 169 aa10.72□□□□□ -0.69
COMMD4-203ENST00000480484 DRAXINQ8NBI3 349 aaPredicted RBP10.72□□□□□ -0.69
COMMD4-203ENST00000480484 RBBP8NLQ8NC74 664 aaPredicted RBP10.72□□□□□ -0.69
COMMD4-203ENST00000480484 SLC35C1Q96A29 364 aa10.72□□□□□ -0.69
COMMD4-203ENST00000480484 SKA1Q96BD8 255 aa10.72□□□□□ -0.69
COMMD4-203ENST00000480484 HERPUD2Q9BSE4 406 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms