RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 ITGA7Q13683 1181 aa11.74□□□□□ -0.53
VTI1A-204ENST00000480057 PTGISQ16647 500 aa11.74□□□□□ -0.53
VTI1A-204ENST00000480057 TEX35Q5T0J7 233 aa11.74□□□□□ -0.53
VTI1A-204ENST00000480057 CCDC181Q5TID7 509 aa11.74□□□□□ -0.53
VTI1A-204ENST00000480057 MON1BQ7L1V2 547 aa11.74□□□□□ -0.53
VTI1A-204ENST00000480057 MMGT1Q8N4V1 131 aa11.74□□□□□ -0.53
VTI1A-204ENST00000480057 SLC43A3Q8NBI5 491 aa11.74□□□□□ -0.53
VTI1A-204ENST00000480057 TMEM35BQ8NCS4 154 aa11.74□□□□□ -0.53
VTI1A-204ENST00000480057 MSANTD4Q8NCY6 345 aa11.74□□□□□ -0.53
VTI1A-204ENST00000480057 ACTRT1Q8TDG2 376 aa11.74□□□□□ -0.53
VTI1A-204ENST00000480057 ELMO3Q96BJ8 720 aa11.74□□□□□ -0.53
VTI1A-204ENST00000480057 ZNF560Q96MR9 790 aa11.74□□□□□ -0.53
VTI1A-204ENST00000480057 GLT1D1Q96MS3 346 aa11.74□□□□□ -0.53
VTI1A-204ENST00000480057 MMS19Q96T76 1030 aa11.74□□□□□ -0.53
VTI1A-204ENST00000480057 DNAI2Q9GZS0 605 aa11.74□□□□□ -0.53
VTI1A-204ENST00000480057 NXF3Q9H4D5 531 aaKnown RBP11.74□□□□□ -0.53
VTI1A-204ENST00000480057 MRPL47Q9HD33 250 aaKnown RBP11.74□□□□□ -0.53
VTI1A-204ENST00000480057 ARGLU1Q9NWB6 273 aaPredicted RBP11.74□□□□□ -0.53
VTI1A-204ENST00000480057 NXF1Q9UBU9 619 aaKnown RBP11.74□□□□□ -0.53
VTI1A-204ENST00000480057 CNOT8Q9UFF9 292 aaKnown RBP11.74□□□□□ -0.53
VTI1A-204ENST00000480057 BARX2Q9UMQ3 279 aaPredicted RBP11.74□□□□□ -0.53
VTI1A-204ENST00000480057 POLIQ9UNA4 740 aa11.74□□□□□ -0.53
VTI1A-204ENST00000480057 COG5Q9UP83 839 aa11.74□□□□□ -0.53
VTI1A-204ENST00000480057 IPPQ9Y573 584 aa11.74□□□□□ -0.53
VTI1A-204ENST00000480057 CEP83Q9Y592 693 aa11.74□□□□□ -0.53
VTI1A-204ENST00000480057 SCINQ9Y6U3 715 aa11.74□□□□□ -0.53
VTI1A-204ENST00000480057 FRMPD3Q5JV73 1810 aa11.74□□□□□ -0.53
VTI1A-204ENST00000480057 SMIM28A0A1B0GU29 152 aa11.73□□□□□ -0.53
VTI1A-204ENST00000480057 TARSL2A2RTX5 802 aaKnown RBP11.73□□□□□ -0.53
VTI1A-204ENST00000480057 NCK2O43639 380 aa11.73□□□□□ -0.53
VTI1A-204ENST00000480057 CHRNA1P02708 482 aa11.73□□□□□ -0.53
VTI1A-204ENST00000480057 CALB1P05937 261 aa11.73□□□□□ -0.53
VTI1A-204ENST00000480057 WEE2P0C1S8 567 aa11.73□□□□□ -0.53
VTI1A-204ENST00000480057 SKIP12755 728 aa11.73□□□□□ -0.53
VTI1A-204ENST00000480057 H2AFXP16104 143 aaPredicted RBP11.73□□□□□ -0.53
VTI1A-204ENST00000480057 CD58P19256 250 aa11.73□□□□□ -0.53
VTI1A-204ENST00000480057 MMP8P22894 467 aa11.73□□□□□ -0.53
VTI1A-204ENST00000480057 MCM3P25205 808 aa11.73□□□□□ -0.53
VTI1A-204ENST00000480057 LRPAP1P30533 357 aa11.73□□□□□ -0.53
VTI1A-204ENST00000480057 GRK4P32298 578 aa11.73□□□□□ -0.53
VTI1A-204ENST00000480057 SLC1A1P43005 524 aa11.73□□□□□ -0.53
VTI1A-204ENST00000480057 TAP1Q03518 808 aa11.73□□□□□ -0.53
VTI1A-204ENST00000480057 STILQ15468 1287 aa11.73□□□□□ -0.53
VTI1A-204ENST00000480057 TRIM71Q2Q1W2 868 aaKnown RBP11.73□□□□□ -0.53
VTI1A-204ENST00000480057 NAA35Q5VZE5 725 aa11.73□□□□□ -0.53
VTI1A-204ENST00000480057 C9orf57Q5W0N0 161 aa11.73□□□□□ -0.53
VTI1A-204ENST00000480057 SCARA3Q6AZY7 606 aa11.73□□□□□ -0.53
VTI1A-204ENST00000480057 TWF2Q6IBS0 349 aaKnown RBP11.73□□□□□ -0.53
VTI1A-204ENST00000480057 CCDC70Q6NSX1 233 aa11.73□□□□□ -0.53
VTI1A-204ENST00000480057 MRPL10Q7Z7H8 261 aaKnown RBP11.73□□□□□ -0.53
VTI1A-204ENST00000480057 DNAAF5Q86Y56 855 aa11.73□□□□□ -0.53
VTI1A-204ENST00000480057 RASGEF1CQ8N431 466 aa11.73□□□□□ -0.53
VTI1A-204ENST00000480057 ARRDC4Q8NCT1 418 aa11.73□□□□□ -0.53
VTI1A-204ENST00000480057 SMG8Q8ND04 991 aaKnown RBP11.73□□□□□ -0.53
VTI1A-204ENST00000480057 ZNF564Q8TBZ8 553 aaPredicted RBP11.73□□□□□ -0.53
VTI1A-204ENST00000480057 COG1Q8WTW3 980 aa11.73□□□□□ -0.53
VTI1A-204ENST00000480057 PPP1R13LQ8WUF5 828 aa11.73□□□□□ -0.53
VTI1A-204ENST00000480057 ZNF296Q8WUU4 475 aaPredicted RBP11.73□□□□□ -0.53
VTI1A-204ENST00000480057 TSC1Q92574 1164 aa11.73□□□□□ -0.53
VTI1A-204ENST00000480057 CYFIP2Q96F07 1278 aa11.73□□□□□ -0.53
VTI1A-204ENST00000480057 ZMAT2Q96NC0 199 aaKnown RBP11.73□□□□□ -0.53
VTI1A-204ENST00000480057 NUP85Q9BW27 656 aa11.73□□□□□ -0.53
VTI1A-204ENST00000480057 WNT8AQ9H1J5 351 aa11.73□□□□□ -0.53
VTI1A-204ENST00000480057 CARD9Q9H257 536 aa11.73□□□□□ -0.53
VTI1A-204ENST00000480057 ERVK-5Q9HDB9 667 aa11.73□□□□□ -0.53
VTI1A-204ENST00000480057 SLC38A7Q9NVC3 462 aa11.73□□□□□ -0.53
VTI1A-204ENST00000480057 TTC7AQ9ULT0 858 aaPredicted RBP11.73□□□□□ -0.53
VTI1A-204ENST00000480057 ST3GAL5Q9UNP4 418 aa11.73□□□□□ -0.53
VTI1A-204ENST00000480057 PIRO00625 290 aa11.72□□□□□ -0.53
VTI1A-204ENST00000480057 ZNF185O15231 689 aa11.72□□□□□ -0.53
VTI1A-204ENST00000480057 ZNF623O75123 536 aa11.72□□□□□ -0.53
VTI1A-204ENST00000480057 VDRP11473 427 aa11.72□□□□□ -0.53
VTI1A-204ENST00000480057 ZSCAN20P17040 1043 aaPredicted RBP11.72□□□□□ -0.53
VTI1A-204ENST00000480057 PAX3P23760 479 aa11.72□□□□□ -0.53
VTI1A-204ENST00000480057 YY1P25490 414 aa11.72□□□□□ -0.53
VTI1A-204ENST00000480057 CTNNA2P26232 953 aa11.72□□□□□ -0.53
VTI1A-204ENST00000480057 RAD23BP54727 409 aa11.72□□□□□ -0.53
VTI1A-204ENST00000480057 GSCP56915 257 aaPredicted RBP11.72□□□□□ -0.53
VTI1A-204ENST00000480057 PTP4A2Q12974 167 aa11.72□□□□□ -0.53
VTI1A-204ENST00000480057 NAA30Q147X3 362 aaPredicted RBP11.72□□□□□ -0.53
VTI1A-204ENST00000480057 FBXO47Q5MNV8 452 aa11.72□□□□□ -0.53
VTI1A-204ENST00000480057 LHX8Q68G74 356 aa11.72□□□□□ -0.53
VTI1A-204ENST00000480057 PLEKHA7Q6IQ23 1121 aa11.72□□□□□ -0.53
VTI1A-204ENST00000480057 SCARA5Q6ZMJ2 495 aa11.72□□□□□ -0.53
VTI1A-204ENST00000480057 UNC93AQ86WB7 457 aa11.72□□□□□ -0.53
VTI1A-204ENST00000480057 UBL4BQ8N7F7 174 aa11.72□□□□□ -0.53
VTI1A-204ENST00000480057 SPATA4Q8NEY3 305 aa11.72□□□□□ -0.53
VTI1A-204ENST00000480057 WHAMMQ8TF30 809 aa11.72□□□□□ -0.53
VTI1A-204ENST00000480057 WNT8BQ93098 351 aa11.72□□□□□ -0.53
VTI1A-204ENST00000480057 TMEM176AQ96HP8 235 aa11.72□□□□□ -0.53
VTI1A-204ENST00000480057 CAPZA3Q96KX2 299 aa11.72□□□□□ -0.53
VTI1A-204ENST00000480057 SDCBP2Q9H190 292 aa11.72□□□□□ -0.53
VTI1A-204ENST00000480057 SMYD3Q9H7B4 428 aa11.72□□□□□ -0.53
VTI1A-204ENST00000480057 FAM105AQ9NUU6 356 aa11.72□□□□□ -0.53
VTI1A-204ENST00000480057 GDAP2Q9NXN4 497 aa11.72□□□□□ -0.53
VTI1A-204ENST00000480057 ADAM22Q9P0K1 906 aa11.72□□□□□ -0.53
VTI1A-204ENST00000480057 PARP2Q9UGN5 583 aa11.72□□□□□ -0.53
VTI1A-204ENST00000480057 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.72□□□□□ -0.53
VTI1A-204ENST00000480057 STRIP2Q9ULQ0 834 aa11.72□□□□□ -0.53
VTI1A-204ENST00000480057 PHF24Q9UPV7 400 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms