RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 PALB2Q86YC2 1186 aa11.99□□□□□ -0.49
APTX-223ENST00000479656 RABGGTAQ92696 567 aa11.99□□□□□ -0.49
APTX-223ENST00000479656 PACSIN1Q9BY11 444 aa11.99□□□□□ -0.49
APTX-223ENST00000479656 IRX2Q9BZI1 471 aaPredicted RBP11.99□□□□□ -0.49
APTX-223ENST00000479656 CYP3A43Q9HB55 503 aa11.99□□□□□ -0.49
APTX-223ENST00000479656 GUCA1BQ9UMX6 200 aa11.99□□□□□ -0.49
APTX-223ENST00000479656 KPNA7A9QM74 516 aa11.98□□□□□ -0.49
APTX-223ENST00000479656 PARNO95453 639 aaKnown RBP11.98□□□□□ -0.49
APTX-223ENST00000479656 CXCL10P02778 98 aa11.98□□□□□ -0.49
APTX-223ENST00000479656 GNA15P30679 374 aa11.98□□□□□ -0.49
APTX-223ENST00000479656 TAF6P49848 677 aa11.98□□□□□ -0.49
APTX-223ENST00000479656 ZNF132P52740 706 aa11.98□□□□□ -0.49
APTX-223ENST00000479656 YWHAEP62258 255 aaKnown RBP11.98□□□□□ -0.49
APTX-223ENST00000479656 FMO1Q01740 532 aa11.98□□□□□ -0.49
APTX-223ENST00000479656 KIF5AQ12840 1032 aa11.98□□□□□ -0.49
APTX-223ENST00000479656 APBB2Q92870 758 aa11.98□□□□□ -0.49
APTX-223ENST00000479656 TAS2R14Q9NYV8 317 aa11.98□□□□□ -0.49
APTX-223ENST00000479656 PUF60Q9UHX1 559 aaKnown RBP11.98□□□□□ -0.49
APTX-223ENST00000479656 NENFQ9UMX5 172 aa11.98□□□□□ -0.49
APTX-223ENST00000479656 PDCD11Q14690 1871 aaKnown RBP11.98□□□□□ -0.49
APTX-223ENST00000479656 CASTOR2A6NHX0 329 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 THAP12O43422 761 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 CFHP08603 1231 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 FGFR1P11362 822 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 CAPN2P17655 700 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 SSTR3P32745 418 aaPredicted RBP11.97□□□□□ -0.49
APTX-223ENST00000479656 PNPLA4P41247 253 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 CLCNKBP51801 687 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 LILRA4P59901 499 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 ORC1Q13415 861 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 C10orf76Q5T2E6 689 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 ZNF662Q6ZS27 426 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 WHAMMQ8TF30 809 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 ZNF606Q8WXB4 792 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 ZNF560Q96MR9 790 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 MRPL45Q9BRJ2 306 aaKnown RBP11.97□□□□□ -0.49
APTX-223ENST00000479656 PAAF1Q9BRP4 392 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 LUC7LQ9NQ29 371 aaKnown RBP11.97□□□□□ -0.49
APTX-223ENST00000479656 PAXBP1Q9Y5B6 917 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 SCN1AP35498 2009 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 TRIM43BA6NCK2 446 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 PJA2O43164 708 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 KRT86O43790 486 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 CILPO75339 1184 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 ITGB8P26012 769 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 RAD23BP54727 409 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 SOWAHAQ2M3V2 549 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 SV2CQ496J9 727 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 CLLU1OSQ5K130 101 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 GLB1LQ6UWU2 654 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 ZNF677Q86XU0 584 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 TRIM43Q96BQ3 446 aaPredicted RBP11.97□□□□□ -0.49
APTX-223ENST00000479656 TWNKQ96RR1 684 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 ELOVL4Q9GZR5 314 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 PDCL3Q9H2J4 239 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 PRDM5Q9NQX1 630 aaPredicted RBP11.97□□□□□ -0.49
APTX-223ENST00000479656 TMEM161AQ9NX61 479 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 GDAP2Q9NXN4 497 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 PCDH10Q9P2E7 1040 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 HMGXB4Q9UGU5 601 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 BARX2Q9UMQ3 279 aaPredicted RBP11.97□□□□□ -0.49
APTX-223ENST00000479656 PCDHB7Q9Y5E2 793 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 SCN5AQ14524 2016 aa11.97□□□□□ -0.49
APTX-223ENST00000479656 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.96□□□□□ -0.49
APTX-223ENST00000479656 PODXLO00592 558 aa11.96□□□□□ -0.49
APTX-223ENST00000479656 H2AFZP0C0S5 128 aa11.96□□□□□ -0.49
APTX-223ENST00000479656 BRD2P25440 801 aaKnown RBP11.96□□□□□ -0.49
APTX-223ENST00000479656 NDST1P52848 882 aa11.96□□□□□ -0.49
APTX-223ENST00000479656 GALCP54803 685 aa11.96□□□□□ -0.49
APTX-223ENST00000479656 GNG11P61952 73 aa11.96□□□□□ -0.49
APTX-223ENST00000479656 ETF1P62495 437 aaKnown RBP11.96□□□□□ -0.49
APTX-223ENST00000479656 GRIK3Q13003 919 aa11.96□□□□□ -0.49
APTX-223ENST00000479656 SYT10Q6XYQ8 523 aa11.96□□□□□ -0.49
APTX-223ENST00000479656 H2AFVQ71UI9 128 aa11.96□□□□□ -0.49
APTX-223ENST00000479656 SLC4A11Q8NBS3 891 aa11.96□□□□□ -0.49
APTX-223ENST00000479656 TFAP2BQ92481 460 aa11.96□□□□□ -0.49
APTX-223ENST00000479656 ZNF592Q92610 1267 aa11.96□□□□□ -0.49
APTX-223ENST00000479656 TMEM176AQ96HP8 235 aa11.96□□□□□ -0.49
APTX-223ENST00000479656 ZSWIM1Q9BR11 485 aa11.96□□□□□ -0.49
APTX-223ENST00000479656 ELAC1Q9H777 363 aaKnown RBP11.96□□□□□ -0.49
APTX-223ENST00000479656 SALL4Q9UJQ4 1053 aa11.96□□□□□ -0.49
APTX-223ENST00000479656 MACROD2A1Z1Q3 448 aa11.95□□□□□ -0.5
APTX-223ENST00000479656 INPPL1O15357 1258 aa11.95□□□□□ -0.5
APTX-223ENST00000479656 RTN2O75298 545 aa11.95□□□□□ -0.5
APTX-223ENST00000479656 DDHD2O94830 711 aa11.95□□□□□ -0.5
APTX-223ENST00000479656 TIMP1P01033 207 aa11.95□□□□□ -0.5
APTX-223ENST00000479656 FTLP02792 175 aaPredicted RBP11.95□□□□□ -0.5
APTX-223ENST00000479656 CD19P15391 556 aa11.95□□□□□ -0.5
APTX-223ENST00000479656 RPL9P32969 192 aaKnown RBP11.95□□□□□ -0.5
APTX-223ENST00000479656 INCA1Q0VD86 236 aa11.95□□□□□ -0.5
APTX-223ENST00000479656 TUSC3Q13454 348 aa11.95□□□□□ -0.5
APTX-223ENST00000479656 UPP1Q16831 310 aa11.95□□□□□ -0.5
APTX-223ENST00000479656 NOMO2Q5JPE7 1267 aa11.95□□□□□ -0.5
APTX-223ENST00000479656 ZNF569Q5MCW4 686 aa11.95□□□□□ -0.5
APTX-223ENST00000479656 ZNF280BQ86YH2 543 aa11.95□□□□□ -0.5
APTX-223ENST00000479656 C3orf58Q8NDZ4 430 aa11.95□□□□□ -0.5
APTX-223ENST00000479656 TET1Q8NFU7 2136 aa11.95□□□□□ -0.5
APTX-223ENST00000479656 OR6B3Q8NGW1 331 aa11.95□□□□□ -0.5
APTX-223ENST00000479656 VWCEQ96DN2 955 aa11.95□□□□□ -0.5
APTX-223ENST00000479656 CYFIP2Q96F07 1278 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms