RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 ADRB2P07550 413 aa18.83■□□□□ 0.61
ECHDC1-216ENST00000479525 VIPR2P41587 438 aa18.83■□□□□ 0.61
ECHDC1-216ENST00000479525 SLC39A14Q15043 492 aa18.83■□□□□ 0.61
ECHDC1-216ENST00000479525 SLC44A4Q53GD3 710 aa18.83■□□□□ 0.61
ECHDC1-216ENST00000479525 ELMOD1Q8N336 334 aa18.83■□□□□ 0.61
ECHDC1-216ENST00000479525 STKLD1Q8NE28 680 aa18.83■□□□□ 0.61
ECHDC1-216ENST00000479525 PJA1Q8NG27 643 aa18.83■□□□□ 0.61
ECHDC1-216ENST00000479525 KCNN1Q92952 543 aa18.83■□□□□ 0.61
ECHDC1-216ENST00000479525 ZNF512Q96ME7 567 aaPredicted RBP18.83■□□□□ 0.61
ECHDC1-216ENST00000479525 FAM213AQ9BRX8 229 aa18.83■□□□□ 0.61
ECHDC1-216ENST00000479525 HEBP1Q9NRV9 189 aa18.83■□□□□ 0.61
ECHDC1-216ENST00000479525 DPP3Q9NY33 737 aa18.83■□□□□ 0.61
ECHDC1-216ENST00000479525 DLGAP2Q9P1A6 1054 aa18.83■□□□□ 0.61
ECHDC1-216ENST00000479525 NUP210Q8TEM1 1887 aaPredicted RBP18.83■□□□□ 0.6
ECHDC1-216ENST00000479525 PRR23AA6NEV1 266 aa18.82■□□□□ 0.6
ECHDC1-216ENST00000479525 OAZ2O95190 189 aa18.82■□□□□ 0.6
ECHDC1-216ENST00000479525 NBL1P41271 181 aa18.82■□□□□ 0.6
ECHDC1-216ENST00000479525 NUBP1P53384 320 aa18.82■□□□□ 0.6
ECHDC1-216ENST00000479525 LMBRD2Q68DH5 695 aaPredicted RBP18.82■□□□□ 0.6
ECHDC1-216ENST00000479525 IQCEQ6IPM2 695 aa18.82■□□□□ 0.6
ECHDC1-216ENST00000479525 TPRG1Q6ZUI0 275 aa18.82■□□□□ 0.6
ECHDC1-216ENST00000479525 SHKBP1Q8TBC3 707 aa18.82■□□□□ 0.6
ECHDC1-216ENST00000479525 INTS4Q96HW7 963 aaKnown RBP18.82■□□□□ 0.6
ECHDC1-216ENST00000479525 LPIN3Q9BQK8 851 aa18.82■□□□□ 0.6
ECHDC1-216ENST00000479525 PYM1Q9BRP8 204 aaKnown RBP18.82■□□□□ 0.6
ECHDC1-216ENST00000479525 STRA6Q9BX79 667 aa18.82■□□□□ 0.6
ECHDC1-216ENST00000479525 ZNF334Q9HCZ1 680 aaPredicted RBP18.82■□□□□ 0.6
ECHDC1-216ENST00000479525 FANCMQ8IYD8 2048 aa18.82■□□□□ 0.6
ECHDC1-216ENST00000479525 A0A1W2PRU2 124 aa18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 ANO9A1A5B4 782 aa18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 PIRO00625 290 aa18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 ODC1P11926 461 aa18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 CASP1P29466 404 aa18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 KYAT1Q16773 422 aa18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 SLC39A12Q504Y0 691 aa18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 L1TD1Q5T7N2 865 aaKnown RBP18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 CYP4A22Q5TCH4 519 aa18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 VITQ6UXI7 678 aa18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 CBWD1Q9BRT8 395 aa18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 IRF2BPLQ9H1B7 796 aa18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 ST6GALNAC4Q9H4F1 302 aa18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 SLITRK6Q9H5Y7 841 aa18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 ASAH2Q9NR71 780 aa18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 PANK4Q9NVE7 773 aa18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 STYXL1Q9Y6J8 313 aa18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 CYB561D2O14569 222 aa18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 TARSP26639 723 aaKnown RBP18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 STARD6P59095 220 aa18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 TFAMQ00059 246 aaKnown RBP18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 CCDC142Q17RM4 750 aa18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 WSCD1Q658N2 575 aa18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 PHLDB3Q6NSJ2 640 aa18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 CCDC73Q6ZRK6 1079 aa18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 TMC8Q8IU68 726 aa18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 SYCP3Q8IZU3 236 aa18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 LINC00301Q8NCQ3 95 aa18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 DHX58Q96C10 678 aa18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 RSPRY1Q96DX4 576 aa18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 ASB16Q96NS5 453 aa18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 ACCSQ96QU6 501 aa18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 SEPT5Q99719 369 aaPredicted RBP18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 AVENQ9NQS1 362 aaPredicted RBP18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 GDE1Q9NZC3 331 aa18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 DAXXQ9UER7 740 aaPredicted RBP18.81■□□□□ 0.6
ECHDC1-216ENST00000479525 KANSL1LA0AUZ9 987 aa18.8■□□□□ 0.6
ECHDC1-216ENST00000479525 FAM170BA6NMN3 283 aa18.8■□□□□ 0.6
ECHDC1-216ENST00000479525 HCRTO43612 131 aa18.8■□□□□ 0.6
ECHDC1-216ENST00000479525 ECI2O75521 394 aa18.8■□□□□ 0.6
ECHDC1-216ENST00000479525 GAP43P17677 238 aa18.8■□□□□ 0.6
ECHDC1-216ENST00000479525 TYMPP19971 482 aa18.8■□□□□ 0.6
ECHDC1-216ENST00000479525 POLR2BP30876 1174 aaKnown RBP18.8■□□□□ 0.6
ECHDC1-216ENST00000479525 NASPP49321 788 aaPredicted RBP18.8■□□□□ 0.6
ECHDC1-216ENST00000479525 GPR17Q13304 367 aa18.8■□□□□ 0.6
ECHDC1-216ENST00000479525 PKP1Q13835 747 aa18.8■□□□□ 0.6
ECHDC1-216ENST00000479525 SLFN12LQ6IEE8 588 aa18.8■□□□□ 0.6
ECHDC1-216ENST00000479525 CENPPQ6IPU0 288 aa18.8■□□□□ 0.6
ECHDC1-216ENST00000479525 RTL10Q7L3V2 364 aa18.8■□□□□ 0.6
ECHDC1-216ENST00000479525 LRRTM3Q86VH5 581 aa18.8■□□□□ 0.6
ECHDC1-216ENST00000479525 ZSCAN18Q8TBC5 510 aaPredicted RBP18.8■□□□□ 0.6
ECHDC1-216ENST00000479525 GIPC2Q8TF65 315 aa18.8■□□□□ 0.6
ECHDC1-216ENST00000479525 LRRC3Q9BY71 257 aa18.8■□□□□ 0.6
ECHDC1-216ENST00000479525 LTB4R2Q9NPC1 389 aa18.8■□□□□ 0.6
ECHDC1-216ENST00000479525 NDRG2Q9UN36 371 aaKnown RBP18.8■□□□□ 0.6
ECHDC1-216ENST00000479525 OR6C75A6NL08 312 aa18.79■□□□□ 0.6
ECHDC1-216ENST00000479525 SHISA7A6NL88 538 aa18.79■□□□□ 0.6
ECHDC1-216ENST00000479525 ZNF197O14709 1029 aa18.79■□□□□ 0.6
ECHDC1-216ENST00000479525 SPTLC2O15270 562 aa18.79■□□□□ 0.6
ECHDC1-216ENST00000479525 GDI1P31150 447 aa18.79■□□□□ 0.6
ECHDC1-216ENST00000479525 GPR15P49685 360 aa18.79■□□□□ 0.6
ECHDC1-216ENST00000479525 TAF6P49848 677 aa18.79■□□□□ 0.6
ECHDC1-216ENST00000479525 CYP4F8P98187 520 aa18.79■□□□□ 0.6
ECHDC1-216ENST00000479525 ARMCX5Q6P1M9 558 aa18.79■□□□□ 0.6
ECHDC1-216ENST00000479525 CD302Q8IX05 232 aa18.79■□□□□ 0.6
ECHDC1-216ENST00000479525 TTC8Q8TAM2 541 aa18.79■□□□□ 0.6
ECHDC1-216ENST00000479525 ELSPBP1Q96BH3 223 aa18.79■□□□□ 0.6
ECHDC1-216ENST00000479525 CHAMP1Q96JM3 812 aa18.79■□□□□ 0.6
ECHDC1-216ENST00000479525 ZSCAN16Q9H4T2 348 aaPredicted RBP18.79■□□□□ 0.6
ECHDC1-216ENST00000479525 ASB7Q9H672 318 aa18.79■□□□□ 0.6
ECHDC1-216ENST00000479525 BRD9Q9H8M2 597 aa18.79■□□□□ 0.6
ECHDC1-216ENST00000479525 ZFP14Q9HCL3 533 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms