RNA–Protein interactions for RNA: ENST00000478369.5

VANGL1-206, Transcript of VANGL planar cell polarity protein 1, humanhuman

TSL 3

Gene VANGL1, Length 363 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-206ENST00000478369 NFICP08651 508 aa11.74□□□□□ -0.53
VANGL1-206ENST00000478369 ZSCAN22P10073 491 aaPredicted RBP11.74□□□□□ -0.53
VANGL1-206ENST00000478369 GARTP22102 1010 aa11.74□□□□□ -0.53
VANGL1-206ENST00000478369 ADSSP30520 456 aa11.74□□□□□ -0.53
VANGL1-206ENST00000478369 PNPLA4P41247 253 aa11.74□□□□□ -0.53
VANGL1-206ENST00000478369 ALDH1A3P47895 512 aa11.74□□□□□ -0.53
VANGL1-206ENST00000478369 TAF6P49848 677 aa11.74□□□□□ -0.53
VANGL1-206ENST00000478369 GUCY2FP51841 1108 aa11.74□□□□□ -0.53
VANGL1-206ENST00000478369 EPHB3P54753 998 aa11.74□□□□□ -0.53
VANGL1-206ENST00000478369 SNW1Q13573 536 aaKnown RBP11.74□□□□□ -0.53
VANGL1-206ENST00000478369 TANGO2Q6ICL3 276 aa11.74□□□□□ -0.53
VANGL1-206ENST00000478369 CENPPQ6IPU0 288 aa11.74□□□□□ -0.53
VANGL1-206ENST00000478369 CRELD2Q6UXH1 353 aaPredicted RBP11.74□□□□□ -0.53
VANGL1-206ENST00000478369 METTL23Q86XA0 190 aa11.74□□□□□ -0.53
VANGL1-206ENST00000478369 C1orf210Q8IVY1 113 aa11.74□□□□□ -0.53
VANGL1-206ENST00000478369 C2orf15Q8WU43 125 aaKnown RBP11.74□□□□□ -0.53
VANGL1-206ENST00000478369 SMARCD2Q92925 531 aa11.74□□□□□ -0.53
VANGL1-206ENST00000478369 ZNF396Q96N95 335 aaPredicted RBP11.74□□□□□ -0.53
VANGL1-206ENST00000478369 CUEDC2Q9H467 287 aa11.74□□□□□ -0.53
VANGL1-206ENST00000478369 TMEM206Q9H813 350 aa11.74□□□□□ -0.53
VANGL1-206ENST00000478369 TRPV5Q9NQA5 729 aa11.74□□□□□ -0.53
VANGL1-206ENST00000478369 DPP3Q9NY33 737 aa11.74□□□□□ -0.53
VANGL1-206ENST00000478369 MRPS17Q9Y2R5 130 aaKnown RBP11.74□□□□□ -0.53
VANGL1-206ENST00000478369 YIPF1Q9Y548 306 aa11.74□□□□□ -0.53
VANGL1-206ENST00000478369 VPS13AQ96RL7 3174 aa11.74□□□□□ -0.53
VANGL1-206ENST00000478369 MTMR11A4FU01 709 aa11.73□□□□□ -0.53
VANGL1-206ENST00000478369 PRR23AA6NEV1 266 aa11.73□□□□□ -0.53
VANGL1-206ENST00000478369 PPEF2O14830 753 aa11.73□□□□□ -0.53
VANGL1-206ENST00000478369 KIAA0391O15091 583 aaKnown RBP11.73□□□□□ -0.53
VANGL1-206ENST00000478369 SPTLC1O15269 473 aa11.73□□□□□ -0.53
VANGL1-206ENST00000478369 NCAM2O15394 837 aa11.73□□□□□ -0.53
VANGL1-206ENST00000478369 GCNT3O95395 438 aa11.73□□□□□ -0.53
VANGL1-206ENST00000478369 VNN2O95498 520 aa11.73□□□□□ -0.53
VANGL1-206ENST00000478369 DCNP07585 359 aaKnown RBP11.73□□□□□ -0.53
VANGL1-206ENST00000478369 FCARP24071 287 aa11.73□□□□□ -0.53
VANGL1-206ENST00000478369 CCR2P41597 374 aa11.73□□□□□ -0.53
VANGL1-206ENST00000478369 TUFMP49411 452 aaKnown RBP11.73□□□□□ -0.53
VANGL1-206ENST00000478369 STK38Q15208 465 aa11.73□□□□□ -0.53
VANGL1-206ENST00000478369 SV2CQ496J9 727 aa11.73□□□□□ -0.53
VANGL1-206ENST00000478369 FAM78AQ5JUQ0 283 aa11.73□□□□□ -0.53
VANGL1-206ENST00000478369 ZC3H14Q6PJT7 736 aaKnown RBP11.73□□□□□ -0.53
VANGL1-206ENST00000478369 STXBP4Q6ZWJ1 553 aa11.73□□□□□ -0.53
VANGL1-206ENST00000478369 FRMD5Q7Z6J6 570 aa11.73□□□□□ -0.53
VANGL1-206ENST00000478369 ITIH5Q86UX2 942 aa11.73□□□□□ -0.53
VANGL1-206ENST00000478369 CCDC65Q8IXS2 484 aa11.73□□□□□ -0.53
VANGL1-206ENST00000478369 THEM5Q8N1Q8 247 aa11.73□□□□□ -0.53
VANGL1-206ENST00000478369 LINC00301Q8NCQ3 95 aa11.73□□□□□ -0.53
VANGL1-206ENST00000478369 ST13P5Q8NFI4 369 aaPredicted RBP11.73□□□□□ -0.53
VANGL1-206ENST00000478369 CACTINQ8WUQ7 758 aaKnown RBP11.73□□□□□ -0.53
VANGL1-206ENST00000478369 DEPDC1BQ8WUY9 529 aa11.73□□□□□ -0.53
VANGL1-206ENST00000478369 IRF7Q92985 503 aa11.73□□□□□ -0.53
VANGL1-206ENST00000478369 TCEAL4Q96EI5 215 aa11.73□□□□□ -0.53
VANGL1-206ENST00000478369 ZNF560Q96MR9 790 aa11.73□□□□□ -0.53
VANGL1-206ENST00000478369 TRMT61BQ9BVS5 477 aaKnown RBP11.73□□□□□ -0.53
VANGL1-206ENST00000478369 BCO2Q9BYV7 579 aa11.73□□□□□ -0.53
VANGL1-206ENST00000478369 TNMDQ9H2S6 317 aa11.73□□□□□ -0.53
VANGL1-206ENST00000478369 PANK4Q9NVE7 773 aa11.73□□□□□ -0.53
VANGL1-206ENST00000478369 DMDP11532 3685 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 TISP43B9A030 160 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 MAN2B1O00754 1011 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 CYB561D2O14569 222 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 SPTLC2O15270 562 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 MOSPD3O75425 235 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 YEATS4O95619 227 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 F13A1P00488 732 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 OR4Q2P0C623 313 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 MYL4P12829 197 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 IDEP14735 1019 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 GLULP15104 373 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 PSMC3P17980 439 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 RPS9P46781 194 aaKnown RBP11.72□□□□□ -0.53
VANGL1-206ENST00000478369 MLLT6P55198 1093 aaPredicted RBP11.72□□□□□ -0.53
VANGL1-206ENST00000478369 AMPD3Q01432 767 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 DUSP4Q13115 394 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 ZNF528Q3MIS6 628 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 ATL3Q6DD88 541 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 POTEHQ6S545 545 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 ZNF852Q6ZMS4 543 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 ASCL5Q7RTU5 278 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 BRSK2Q8IWQ3 736 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 HS6ST3Q8IZP7 471 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 SYCP3Q8IZU3 236 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 TMEM130Q8N3G9 435 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 SPRYD3Q8NCJ5 442 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 PSMG2Q969U7 264 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 PGLYRP2Q96PD5 576 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 FAM213AQ9BRX8 229 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 LRRC3Q9BY71 257 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 PLA2G2FQ9BZM2 168 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 FOXQ1Q9C009 403 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 ZCWPW1Q9H0M4 648 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 BRD9Q9H8M2 597 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 LTB4R2Q9NPC1 389 aa11.72□□□□□ -0.53
VANGL1-206ENST00000478369 TFIP11Q9UBB9 837 aaKnown RBP11.72□□□□□ -0.53
VANGL1-206ENST00000478369 A0A087X0B3 334 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 FAM170BA6NMN3 283 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 KPNA7A9QM74 516 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 EXTL3O43909 919 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 WEE1P30291 646 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 KCNA1Q09470 495 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms