RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 EPHB2P29323 1055 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 CXCR5P32302 372 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 PPARGP37231 505 aaPredicted RBP13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 HSD17B4P51659 736 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 COG7P83436 770 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 MAP3K21Q5TCX8 1036 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 BTNL9Q6UXG8 535 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 GRAMD1CQ8IYS0 662 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 NAP1L4Q99733 375 aaKnown RBP13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 TMEM109Q9BVC6 243 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 DDX18Q9NVP1 670 aaKnown RBP13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 GIN1Q9NXP7 522 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 SEPT10Q9P0V9 454 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 COL4A5P29400 1685 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 SOBPA7XYQ1 873 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 A8MXQ7 604 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 FAM25EA8MYX2 175 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 TCP11X1B4DZS4 312 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 RGS16O15492 202 aaPredicted RBP13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 TSPAN1O60635 241 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 TRMUO75648 421 aaKnown RBP13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 CHRNB1P11230 501 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 PABPC1P11940 636 aaKnown RBP13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 PRKACBP22694 351 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 GRIA2P42262 883 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 TNNI2P48788 182 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 POLGP54098 1239 aaPredicted RBP13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 UBXN1Q04323 297 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 COBLL1Q53SF7 1204 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 ECHDC2Q86YB7 292 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 KBTBD2Q8IY47 623 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 ZFRQ96KR1 1074 aaKnown RBP13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 BIRC8Q96P09 236 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 CTRCQ99895 268 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 CCSER1Q9C0I3 900 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 RBM38Q9H0Z9 239 aaKnown RBP13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 TMEM60Q9H2L4 133 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 DISC1Q9NRI5 854 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 PLK2Q9NYY3 685 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 PPP1R1BQ9UD71 204 aaPredicted RBP13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 LRWD1Q9UFC0 647 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 UTP11Q9Y3A2 253 aaKnown RBP13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 FER1L6Q2WGJ9 1857 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 ZNF862O60290 1169 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 FARP2O94887 1054 aaPredicted RBP13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 MOCS3O95396 460 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 NDUFB10O96000 172 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 BMP3P12645 472 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 RPS12P25398 132 aaKnown RBP13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 GSSP48637 474 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 EIF2B2P49770 351 aaKnown RBP13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 NEK3P51956 506 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 DPYDQ12882 1025 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 IKQ13123 557 aaPredicted RBP13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 TCP11X2Q5H9J9 407 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 TMTC4Q5T4D3 741 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 RRAGBQ5VZM2 374 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 NIPAL1Q6NVV3 410 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 RBM44Q6ZP01 1051 aaKnown RBP13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 SIAH1Q8IUQ4 282 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 SEC14L1Q92503 715 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 INPP4AQ96PE3 977 aaPredicted RBP13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 RAB34Q9BZG1 259 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 MYLK2Q9H1R3 596 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 CUEDC2Q9H467 287 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 MAGEF1Q9HAY2 307 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 NLRC4Q9NPP4 1024 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 EMILIN3Q9NT22 766 aa13.34□□□□□ -0.27
RTFDC1-207ENST00000477573 MYH11P35749 1972 aa13.33□□□□□ -0.28
RTFDC1-207ENST00000477573 GTPBP6O43824 516 aaPredicted RBP13.33□□□□□ -0.28
RTFDC1-207ENST00000477573 MARCH6O60337 910 aa13.33□□□□□ -0.28
RTFDC1-207ENST00000477573 RNASEH1O60930 286 aaKnown RBP13.33□□□□□ -0.28
RTFDC1-207ENST00000477573 RPS3AP61247 264 aaKnown RBP13.33□□□□□ -0.28
RTFDC1-207ENST00000477573 MGAT5Q09328 741 aa13.33□□□□□ -0.28
RTFDC1-207ENST00000477573 SF3A3Q12874 501 aaKnown RBP eCLIP13.33□□□□□ -0.28
RTFDC1-207ENST00000477573 TRADDQ15628 312 aa13.33□□□□□ -0.28
RTFDC1-207ENST00000477573 TMEM266Q2M3C6 531 aa13.33□□□□□ -0.28
RTFDC1-207ENST00000477573 QRICH1Q2TAL8 776 aa13.33□□□□□ -0.28
RTFDC1-207ENST00000477573 TNFAIP8L3Q5GJ75 292 aa13.33□□□□□ -0.28
RTFDC1-207ENST00000477573 AGAP9Q5VTM2 703 aa13.33□□□□□ -0.28
RTFDC1-207ENST00000477573 SPOPLQ6IQ16 392 aa13.33□□□□□ -0.28
RTFDC1-207ENST00000477573 PDXDC2PQ6P474 469 aa13.33□□□□□ -0.28
RTFDC1-207ENST00000477573 SIX5Q8N196 739 aa13.33□□□□□ -0.28
RTFDC1-207ENST00000477573 ALLCQ8N6M5 410 aa13.33□□□□□ -0.28
RTFDC1-207ENST00000477573 USP38Q8NB14 1042 aa13.33□□□□□ -0.28
RTFDC1-207ENST00000477573 SUN5Q8TC36 379 aa13.33□□□□□ -0.28
RTFDC1-207ENST00000477573 PTCD2Q8WV60 388 aaKnown RBP13.33□□□□□ -0.28
RTFDC1-207ENST00000477573 PRPF31Q8WWY3 499 aaKnown RBP13.33□□□□□ -0.28
RTFDC1-207ENST00000477573 DPF3Q92784 378 aa13.33□□□□□ -0.28
RTFDC1-207ENST00000477573 SGF29Q96ES7 293 aa13.33□□□□□ -0.28
RTFDC1-207ENST00000477573 OTUD5Q96G74 571 aa13.33□□□□□ -0.28
RTFDC1-207ENST00000477573 SPATA17Q96L03 361 aa13.33□□□□□ -0.28
RTFDC1-207ENST00000477573 TXLNGYQ9BZA5 131 aa13.33□□□□□ -0.28
RTFDC1-207ENST00000477573 DDX47Q9H0S4 455 aaKnown RBP13.33□□□□□ -0.28
RTFDC1-207ENST00000477573 VPS16Q9H269 839 aa13.33□□□□□ -0.28
RTFDC1-207ENST00000477573 PCDHA1Q9Y5I3 950 aa13.33□□□□□ -0.28
RTFDC1-207ENST00000477573 ARFGEF1Q9Y6D6 1849 aa13.33□□□□□ -0.28
RTFDC1-207ENST00000477573 SPDYE16A6NNV3 312 aaPredicted RBP13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 MAPK13O15264 365 aa13.32□□□□□ -0.28
RTFDC1-207ENST00000477573 PPP1R11O60927 126 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms