RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 TXNDC11Q6PKC3 985 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 ARID3BQ8IVW6 561 aaPredicted RBP7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 ZNF687Q8N1G0 1237 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 TMEM130Q8N3G9 435 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 RSPRY1Q96DX4 576 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 FAM212AQ96EL1 285 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 KIF12Q96FN5 646 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 MSANTD3Q96H12 275 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 C8orf76Q96K31 380 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 ZBTB45Q96K62 511 aaPredicted RBP7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 DRC1Q96MC2 740 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 GCNAQ96QF7 691 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 SEPT5Q99719 369 aaPredicted RBP7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 RAB34Q9BZG1 259 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 SMOC1Q9H4F8 434 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 TRPV5Q9NQA5 729 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 CNTN3Q9P232 1028 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 NOL7Q9UMY1 257 aaKnown RBP7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 SLC8A2Q9UPR5 921 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 HELZP42694 1942 aaKnown RBP7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 USP24Q9UPU5 2620 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 SCN1AP35498 2009 aa7.27□□□□□ -1.25
RTFDC1-206ENST00000477485 K7ESF4 209 aa7.27□□□□□ -1.25
RTFDC1-206ENST00000477485 FOXD2O60548 495 aaPredicted RBP7.27□□□□□ -1.25
RTFDC1-206ENST00000477485 KCNE1P15382 129 aa7.27□□□□□ -1.25
RTFDC1-206ENST00000477485 GUCY2FP51841 1108 aa7.27□□□□□ -1.25
RTFDC1-206ENST00000477485 CYP4F8P98187 520 aa7.27□□□□□ -1.25
RTFDC1-206ENST00000477485 PPP2R3AQ06190 1150 aa7.27□□□□□ -1.25
RTFDC1-206ENST00000477485 PSMD2Q13200 908 aa7.27□□□□□ -1.25
RTFDC1-206ENST00000477485 MRPL58Q14197 206 aaKnown RBP7.27□□□□□ -1.25
RTFDC1-206ENST00000477485 VEPH1Q14D04 833 aa7.27□□□□□ -1.25
RTFDC1-206ENST00000477485 XKR4Q5GH76 650 aa7.27□□□□□ -1.25
RTFDC1-206ENST00000477485 N4BP2L1Q5TBK1 243 aaPredicted RBP7.27□□□□□ -1.25
RTFDC1-206ENST00000477485 KRT79Q5XKE5 535 aa7.27□□□□□ -1.25
RTFDC1-206ENST00000477485 OVOS1Q6IE37 1185 aa7.27□□□□□ -1.25
RTFDC1-206ENST00000477485 ALKAL1Q6UXT8 129 aa7.27□□□□□ -1.25
RTFDC1-206ENST00000477485 ITIH5Q86UX2 942 aa7.27□□□□□ -1.25
RTFDC1-206ENST00000477485 RALGPS2Q86X27 583 aaPredicted RBP7.27□□□□□ -1.25
RTFDC1-206ENST00000477485 CCDC83Q8IWF9 413 aa7.27□□□□□ -1.25
RTFDC1-206ENST00000477485 FAM184AQ8NB25 1140 aa7.27□□□□□ -1.25
RTFDC1-206ENST00000477485 RUSC1Q9BVN2 902 aa7.27□□□□□ -1.25
RTFDC1-206ENST00000477485 SMG9Q9H0W8 520 aaKnown RBP7.27□□□□□ -1.25
RTFDC1-206ENST00000477485 TMEM134Q9H6X4 195 aa7.27□□□□□ -1.25
RTFDC1-206ENST00000477485 TRPV4Q9HBA0 871 aa7.27□□□□□ -1.25
RTFDC1-206ENST00000477485 C2orf42Q9NWW7 574 aa7.27□□□□□ -1.25
RTFDC1-206ENST00000477485 THG1LQ9NWX6 298 aaKnown RBP7.27□□□□□ -1.25
RTFDC1-206ENST00000477485 DNM3Q9UQ16 869 aa7.27□□□□□ -1.25
RTFDC1-206ENST00000477485 CEP192Q8TEP8 1941 aa7.27□□□□□ -1.25
RTFDC1-206ENST00000477485 CNOT1A5YKK6 2376 aaKnown RBP7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 MYBPHLA2RUH7 354 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 MTMR11A4FU01 709 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 PP2D1A8MPX8 630 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 ARNTLO00327 626 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 CLDN3O15551 220 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 XPOTO43592 962 aaKnown RBP7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 EXTL3O43909 919 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 TOM1L1O75674 476 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 PRAMEF12O95522 483 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 FGF19O95750 216 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 ODC1P11926 461 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 MUTP22033 750 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 CDC25AP30304 524 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 FXR2P51116 673 aaKnown RBP eCLIP7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 NEK4P51957 841 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 SMTNP53814 917 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 EPHA5P54756 1037 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 CREB5Q02930 508 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 FCHO2Q0JRZ9 810 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 GRSF1Q12849 480 aaKnown RBP eCLIP7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 BFSP1Q12934 665 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 ORC2Q13416 577 aaPredicted RBP7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 PTPAQ15257 358 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 SLC10A6Q3KNW5 377 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 ITPRIPL2Q3MIP1 535 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 MGAT5BQ3V5L5 792 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 STPG1Q5TH74 334 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 RNF43Q68DV7 783 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 PSAPL1Q6NUJ1 521 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 MAMSTRQ6ZN01 415 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 TAS1R3Q7RTX0 852 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 CACNA2D4Q7Z3S7 1137 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 DNAJB7Q7Z6W7 309 aaPredicted RBP7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 KBTBD6Q86V97 674 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 WDR5BQ86VZ2 330 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 TMC8Q8IU68 726 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 TTC9BQ8N6N2 239 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 ATAD1Q8NBU5 361 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 BPIFB1Q8TDL5 484 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 GIPC2Q8TF65 315 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 GAB3Q8WWW8 586 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 CDK5RAP3Q96JB5 506 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 HHIPQ96QV1 700 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 PLIN2Q99541 437 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 LPIN3Q9BQK8 851 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 DNAJC25Q9H1X3 360 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 CRISPLD1Q9H336 500 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 PTPRHQ9HD43 1115 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 RXFP3Q9NSD7 469 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 ARHGAP28Q9P2N2 729 aa7.26□□□□□ -1.25
RTFDC1-206ENST00000477485 MAFFQ9ULX9 164 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms