RNA–Protein interactions for RNA: ENST00000477345.1

TPRN-203, Transcript of taperin, humanhuman

TSL 1 (best)

Gene TPRN, Length 3,350 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRN-203ENST00000477345 CERKQ8TCT0 537 aa13.65□□□□□ -0.22
TPRN-203ENST00000477345 DNAJC1Q96KC8 554 aaKnown RBP13.65□□□□□ -0.22
TPRN-203ENST00000477345 RBM15Q96T37 977 aaKnown RBP eCLIP13.65□□□□□ -0.22
TPRN-203ENST00000477345 ZSWIM1Q9BR11 485 aa13.65□□□□□ -0.22
TPRN-203ENST00000477345 DNAJC18Q9H819 358 aa13.65□□□□□ -0.22
TPRN-203ENST00000477345 BMP3P12645 472 aa13.65□□□□□ -0.22
TPRN-203ENST00000477345 NEK2P51955 445 aa13.65□□□□□ -0.22
TPRN-203ENST00000477345 EN1Q05925 392 aaPredicted RBP13.65□□□□□ -0.22
TPRN-203ENST00000477345 PPATQ06203 517 aa13.65□□□□□ -0.22
TPRN-203ENST00000477345 THOC5Q13769 683 aaKnown RBP13.65□□□□□ -0.22
TPRN-203ENST00000477345 PKN2Q16513 984 aaKnown RBP13.65□□□□□ -0.22
TPRN-203ENST00000477345 CLPPQ16740 277 aaPredicted RBP13.65□□□□□ -0.22
TPRN-203ENST00000477345 PARP6Q2NL67 630 aa13.65□□□□□ -0.22
TPRN-203ENST00000477345 QRICH1Q2TAL8 776 aa13.65□□□□□ -0.22
TPRN-203ENST00000477345 IZUMO3Q5VZ72 239 aa13.65□□□□□ -0.22
TPRN-203ENST00000477345 DSTYKQ6XUX3 929 aa13.65□□□□□ -0.22
TPRN-203ENST00000477345 NME8Q8N427 588 aa13.65□□□□□ -0.22
TPRN-203ENST00000477345 FBXO41Q8TF61 875 aa13.65□□□□□ -0.22
TPRN-203ENST00000477345 POLR3CQ9BUI4 534 aaPredicted RBP13.65□□□□□ -0.22
TPRN-203ENST00000477345 TRABDQ9H4I3 376 aa13.65□□□□□ -0.22
TPRN-203ENST00000477345 PLCH1Q4KWH8 1693 aa13.65□□□□□ -0.22
TPRN-203ENST00000477345 TMEM150BA6NC51 233 aa13.65□□□□□ -0.23
TPRN-203ENST00000477345 PPP1R11O60927 126 aaPredicted RBP13.65□□□□□ -0.23
TPRN-203ENST00000477345 LYNP07948 512 aa13.65□□□□□ -0.23
TPRN-203ENST00000477345 TMEM253P0C7T8 217 aa13.65□□□□□ -0.23
TPRN-203ENST00000477345 CHRNB2P17787 502 aa13.65□□□□□ -0.23
TPRN-203ENST00000477345 SKIV2L2P42285 1042 aaKnown RBP13.65□□□□□ -0.23
TPRN-203ENST00000477345 SYDE2Q5VT97 1194 aa13.65□□□□□ -0.23
TPRN-203ENST00000477345 FRMD5Q7Z6J6 570 aa13.65□□□□□ -0.23
TPRN-203ENST00000477345 NAT14Q8WUY8 206 aa13.65□□□□□ -0.23
TPRN-203ENST00000477345 SRPK1Q96SB4 655 aaKnown RBP13.65□□□□□ -0.23
TPRN-203ENST00000477345 METTL14Q9HCE5 456 aaKnown RBP13.65□□□□□ -0.23
TPRN-203ENST00000477345 TYW1Q9NV66 732 aaKnown RBP13.65□□□□□ -0.23
TPRN-203ENST00000477345 TDRKHQ9Y2W6 561 aaKnown RBP13.65□□□□□ -0.23
TPRN-203ENST00000477345 O00370 1275 aa13.64□□□□□ -0.23
TPRN-203ENST00000477345 CCNB1P14635 433 aa13.64□□□□□ -0.23
TPRN-203ENST00000477345 RPA3P35244 121 aaPredicted RBP13.64□□□□□ -0.23
TPRN-203ENST00000477345 ATXN3P54252 364 aaPredicted RBP13.64□□□□□ -0.23
TPRN-203ENST00000477345 ARHGAP4P98171 946 aa13.64□□□□□ -0.23
TPRN-203ENST00000477345 CYLC2Q14093 348 aaPredicted RBP13.64□□□□□ -0.23
TPRN-203ENST00000477345 R3HDM1Q15032 1099 aaKnown RBP13.64□□□□□ -0.23
TPRN-203ENST00000477345 TMEM259Q4ZIN3 620 aa13.64□□□□□ -0.23
TPRN-203ENST00000477345 SH3D19Q5HYK7 790 aa13.64□□□□□ -0.23
TPRN-203ENST00000477345 FYB2Q5VWT5 728 aa13.64□□□□□ -0.23
TPRN-203ENST00000477345 SAMD3Q8N6K7 520 aa13.64□□□□□ -0.23
TPRN-203ENST00000477345 DAGLBQ8NCG7 672 aa13.64□□□□□ -0.23
TPRN-203ENST00000477345 TSC22D4Q9Y3Q8 395 aa13.64□□□□□ -0.23
TPRN-203ENST00000477345 SPO11Q9Y5K1 396 aa13.64□□□□□ -0.23
TPRN-203ENST00000477345 DDTLA6NHG4 134 aaPredicted RBP13.64□□□□□ -0.23
TPRN-203ENST00000477345 ASMTLO95671 621 aa13.64□□□□□ -0.23
TPRN-203ENST00000477345 FASTKD3Q14CZ7 662 aaKnown RBP13.64□□□□□ -0.23
TPRN-203ENST00000477345 LVRNQ6Q4G3 990 aa13.64□□□□□ -0.23
TPRN-203ENST00000477345 ANKRD35Q8N283 1001 aa13.64□□□□□ -0.23
TPRN-203ENST00000477345 TMEM117Q9H0C3 514 aa13.64□□□□□ -0.23
TPRN-203ENST00000477345 APEX2Q9UBZ4 518 aa13.64□□□□□ -0.23
TPRN-203ENST00000477345 CHKBQ9Y259 395 aa13.64□□□□□ -0.23
TPRN-203ENST00000477345 A0A1W2PPM1 405 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 USP1O94782 785 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 NUDT17P0C025 328 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 PDE1BQ01064 536 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 OCRLQ01968 901 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 WASHC2DQ5SRD0 308 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 CTAGE3PQ8IX95 158 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 ST13P4Q8IZP2 240 aaPredicted RBP13.63□□□□□ -0.23
TPRN-203ENST00000477345 RILPQ96NA2 401 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 FAM47DPA6NHR8 397 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 MAP3K7O43318 606 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 ENO1P06733 434 aaKnown RBP13.63□□□□□ -0.23
TPRN-203ENST00000477345 TMEM119Q4V9L6 283 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 TRIM67Q6ZTA4 783 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 MARK2Q7KZI7 788 aaKnown RBP13.63□□□□□ -0.23
TPRN-203ENST00000477345 DPH6Q7L8W6 267 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 C14orf80Q86SX3 495 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 EFCAB3Q8N7B9 438 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 CEP70Q8NHQ1 597 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 NEDD1Q8NHV4 660 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 CLPTM1LQ96KA5 538 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 STK33Q9BYT3 514 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 NINJ2Q9NZG7 142 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 PITPNM2Q9BZ72 1349 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 PNMA6FA0A0J9YX94 578 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 EML1O00423 815 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 RALAP11233 206 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 ESRRAP11474 423 aaPredicted RBP13.63□□□□□ -0.23
TPRN-203ENST00000477345 PORP16435 677 aaPredicted RBP13.63□□□□□ -0.23
TPRN-203ENST00000477345 RRM1P23921 792 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 HOXD13P35453 343 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 HALP42357 657 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 EPHB1P54762 984 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 ARPC4P59998 168 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 BTKQ06187 659 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 CERKLQ49MI3 558 aaPredicted RBP13.63□□□□□ -0.23
TPRN-203ENST00000477345 NLRP9Q7RTR0 991 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 CCDC125Q86Z20 511 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 CKAP2Q8WWK9 683 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 SNX27Q96L92 541 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 KIFC3Q9BVG8 833 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 OSBPL10Q9BXB5 764 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 SIX2Q9NPC8 291 aa13.63□□□□□ -0.23
TPRN-203ENST00000477345 MTMR4Q9NYA4 1195 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms