RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 LMCD1Q9NZU5 365 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 NYAP2Q9P242 653 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 SLC24A2Q9UI40 661 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 TBC1D12O60347 775 aa16.12■□□□□ 0.17
CLSTN1-205ENST00000477264 TBX10O75333 385 aa16.12■□□□□ 0.17
CLSTN1-205ENST00000477264 FAM13AO94988 1023 aa16.12■□□□□ 0.17
CLSTN1-205ENST00000477264 GH2P01242 217 aa16.12■□□□□ 0.17
CLSTN1-205ENST00000477264 EEF2P13639 858 aaKnown RBP16.12■□□□□ 0.17
CLSTN1-205ENST00000477264 MAGEA4P43358 317 aa16.12■□□□□ 0.17
CLSTN1-205ENST00000477264 CDK7P50613 346 aa16.12■□□□□ 0.17
CLSTN1-205ENST00000477264 BFSP1Q12934 665 aa16.12■□□□□ 0.17
CLSTN1-205ENST00000477264 RASIP1Q5U651 963 aa16.12■□□□□ 0.17
CLSTN1-205ENST00000477264 CCDC62Q6P9F0 684 aa16.12■□□□□ 0.17
CLSTN1-205ENST00000477264 ZNF365Q70YC5 407 aa16.12■□□□□ 0.17
CLSTN1-205ENST00000477264 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.12■□□□□ 0.17
CLSTN1-205ENST00000477264 SLC9A9Q8IVB4 645 aa16.12■□□□□ 0.17
CLSTN1-205ENST00000477264 VPS52Q8N1B4 723 aa16.12■□□□□ 0.17
CLSTN1-205ENST00000477264 IWS1Q96ST2 819 aa16.12■□□□□ 0.17
CLSTN1-205ENST00000477264 JMJD4Q9H9V9 463 aa16.12■□□□□ 0.17
CLSTN1-205ENST00000477264 HACL1Q9UJ83 578 aa16.12■□□□□ 0.17
CLSTN1-205ENST00000477264 RAD21O60216 631 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 LRRN2O75325 713 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 SPAG7O75391 227 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 SPATA31C1P0DKV0 1188 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 CA4P22748 312 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 RAP1GDS1P52306 607 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 DSG1Q02413 1049 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 ZNF543Q08ER8 600 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 LIN52Q52LA3 116 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 IZUMO3Q5VZ72 239 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 CCDC174Q6PII3 467 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 MTDHQ86UE4 582 aaKnown RBP16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 ST13P4Q8IZP2 240 aaPredicted RBP16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 NME8Q8N427 588 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 ETNPPLQ8TBG4 499 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 SPOCK2Q92563 424 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 ZNF75CPQ92670 426 aaPredicted RBP16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 POLR3CQ9BUI4 534 aaPredicted RBP16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 ANO3Q9BYT9 981 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 UBE2OQ9C0C9 1292 aaKnown RBP16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 KIAA1586Q9HCI6 787 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 CIDEBQ9UHD4 219 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 TBC1D30Q9Y2I9 924 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 RABGAP1Q9Y3P9 1069 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 NEU2Q9Y3R4 380 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 ZNF536O15090 1300 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 ZBTB5O15062 677 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 TYROBPO43914 113 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 PYGBP11216 843 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 KRT15P19012 456 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 STAT3P40763 770 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 SLC1A1P43005 524 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 MAGEA8P43361 318 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 LSAMPQ13449 338 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 GPATCH4Q5T3I0 446 aaKnown RBP16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 ANKS1BQ7Z6G8 1248 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 LMO3Q8TAP4 145 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 MKL1Q969V6 931 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 ZNF653Q96CK0 615 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 FAM20AQ96MK3 541 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 TRIM55Q9BYV6 548 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 OSBPL8Q9BZF1 889 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 CHST7Q9NS84 486 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 FETUBQ9UGM5 382 aa16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 MTO1Q9Y2Z2 717 aaKnown RBP16.11■□□□□ 0.17
CLSTN1-205ENST00000477264 A0A1B0GVG6 124 aa16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 RSPH10B2B2RC85 870 aa16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 MAGEC1O60732 1142 aa16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 RSPH10BP0C881 870 aa16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 CETN2P41208 172 aa16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 PTP4A2Q12974 167 aa16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 SHROOM1Q2M3G4 852 aaPredicted RBP16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 Q4G0T1 1027 aa16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 C6orf163Q5TEZ5 329 aa16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 NOP9Q86U38 636 aaKnown RBP16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 TRIM74Q86UV6 250 aa16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 TRIM73Q86UV7 250 aa16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 ADGRF4Q8IZF3 695 aa16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 NPHS2Q9NP85 383 aa16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 DNAJC17Q9NVM6 304 aaKnown RBP16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 NDUFA13Q9P0J0 144 aa16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 SCAF8Q9UPN6 1271 aaKnown RBP16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 SRCAPQ6ZRS2 3230 aa16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 TM9SF1O15321 606 aa16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 PPP1R11O60927 126 aaPredicted RBP16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 GCAP28676 217 aa16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 PSMC6P62333 389 aa16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 MCL1Q07820 350 aa16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 ADCY1Q08828 1119 aa16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 WDR72Q3MJ13 1102 aa16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 MARK2Q7KZI7 788 aaKnown RBP16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 CCNJLQ8IV13 435 aa16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 CDAN1Q8IWY9 1227 aa16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 PDCD7Q8N8D1 485 aaKnown RBP16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 EPS8L1Q8TE68 723 aa16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 PPP2R3CQ969Q6 453 aa16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 C9orf72Q96LT7 481 aa16.1■□□□□ 0.17
CLSTN1-205ENST00000477264 RBM15Q96T37 977 aaKnown RBP eCLIP16.1■□□□□ 0.174e-6■■□□□ 13.2
CLSTN1-205ENST00000477264 KRT82Q9NSB4 513 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms