RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 ALPLP05186 524 aa3.62□□□□□ -1.83
XRN1-211ENST00000477237 RHOP08100 348 aa3.62□□□□□ -1.83
XRN1-211ENST00000477237 NXPH1P58417 271 aa3.62□□□□□ -1.83
XRN1-211ENST00000477237 FHL3Q13643 280 aa3.62□□□□□ -1.83
XRN1-211ENST00000477237 KRT81Q14533 505 aa3.62□□□□□ -1.83
XRN1-211ENST00000477237 SF3A1Q15459 793 aaKnown RBP3.62□□□□□ -1.83
XRN1-211ENST00000477237 TRIP6Q15654 476 aaKnown RBP3.62□□□□□ -1.83
XRN1-211ENST00000477237 TKFCQ3LXA3 575 aa3.62□□□□□ -1.83
XRN1-211ENST00000477237 Q4G0T1 1027 aa3.62□□□□□ -1.83
XRN1-211ENST00000477237 CEP85Q6P2H3 762 aa3.62□□□□□ -1.83
XRN1-211ENST00000477237 NIM1KQ8IY84 436 aa3.62□□□□□ -1.83
XRN1-211ENST00000477237 NANOGP1Q8N7R0 232 aa3.62□□□□□ -1.83
XRN1-211ENST00000477237 B3GALNT2Q8NCR0 500 aa3.62□□□□□ -1.83
XRN1-211ENST00000477237 TGFBRAP1Q8WUH2 860 aa3.62□□□□□ -1.83
XRN1-211ENST00000477237 NINJ1Q92982 152 aa3.62□□□□□ -1.83
XRN1-211ENST00000477237 QRSL1Q9H0R6 528 aaKnown RBP3.62□□□□□ -1.83
XRN1-211ENST00000477237 DMRT3Q9NQL9 472 aa3.62□□□□□ -1.83
XRN1-211ENST00000477237 TMEM140Q9NV12 185 aa3.62□□□□□ -1.83
XRN1-211ENST00000477237 ZBTB21Q9ULJ3 1066 aa3.62□□□□□ -1.83
XRN1-211ENST00000477237 ADAMTS3O15072 1205 aa3.61□□□□□ -1.83
XRN1-211ENST00000477237 SUN1O94901 812 aa3.61□□□□□ -1.83
XRN1-211ENST00000477237 MT3P25713 68 aa3.61□□□□□ -1.83
XRN1-211ENST00000477237 MC2RQ01718 297 aa3.61□□□□□ -1.83
XRN1-211ENST00000477237 ITIH3Q06033 890 aa3.61□□□□□ -1.83
XRN1-211ENST00000477237 ERV3-1Q14264 604 aa3.61□□□□□ -1.83
XRN1-211ENST00000477237 FSCN1Q16658 493 aaKnown RBP3.61□□□□□ -1.83
XRN1-211ENST00000477237 CATSPERGQ6ZRH7 1159 aa3.61□□□□□ -1.83
XRN1-211ENST00000477237 HOMER1Q86YM7 354 aa3.61□□□□□ -1.83
XRN1-211ENST00000477237 GALNT16Q8N428 558 aa3.61□□□□□ -1.83
XRN1-211ENST00000477237 CCHCR1Q8TD31 782 aa3.61□□□□□ -1.83
XRN1-211ENST00000477237 RAX2Q96IS3 184 aa3.61□□□□□ -1.83
XRN1-211ENST00000477237 VCPIP1Q96JH7 1222 aa3.61□□□□□ -1.83
XRN1-211ENST00000477237 PDGFCQ9NRA1 345 aa3.61□□□□□ -1.83
XRN1-211ENST00000477237 TRNAU1APQ9NX07 287 aaKnown RBP3.61□□□□□ -1.83
XRN1-211ENST00000477237 SCOCQ9UIL1 159 aa3.61□□□□□ -1.83
XRN1-211ENST00000477237 PRSS44E7EML9 344 aa3.6□□□□□ -1.83
XRN1-211ENST00000477237 ZNF213O14771 459 aa3.6□□□□□ -1.83
XRN1-211ENST00000477237 TEX33O43247 280 aa3.6□□□□□ -1.83
XRN1-211ENST00000477237 DNAJB5O75953 348 aa3.6□□□□□ -1.83
XRN1-211ENST00000477237 GSPT1P15170 499 aaKnown RBP3.6□□□□□ -1.83
XRN1-211ENST00000477237 ENPP1P22413 925 aa3.6□□□□□ -1.83
XRN1-211ENST00000477237 MUM1L1Q5H9M0 696 aa3.6□□□□□ -1.83
XRN1-211ENST00000477237 TSPEARQ8WU66 669 aa3.6□□□□□ -1.83
XRN1-211ENST00000477237 AUTS2Q8WXX7 1259 aa3.6□□□□□ -1.83
XRN1-211ENST00000477237 SNX19Q92543 992 aa3.6□□□□□ -1.83
XRN1-211ENST00000477237 USP7Q93009 1102 aa3.6□□□□□ -1.83
XRN1-211ENST00000477237 FATE1Q969F0 183 aa3.6□□□□□ -1.83
XRN1-211ENST00000477237 CTAGE1Q96RT6 745 aa3.6□□□□□ -1.83
XRN1-211ENST00000477237 ADI1Q9BV57 179 aa3.6□□□□□ -1.83
XRN1-211ENST00000477237 ACE2Q9BYF1 805 aaPredicted RBP3.6□□□□□ -1.83
XRN1-211ENST00000477237 RBM12Q9NTZ6 932 aaKnown RBP3.6□□□□□ -1.83
XRN1-211ENST00000477237 SERTAD4Q9NUC0 356 aa3.6□□□□□ -1.83
XRN1-211ENST00000477237 CDYLQ9Y232 598 aa3.6□□□□□ -1.83
XRN1-211ENST00000477237 FNDC1Q4ZHG4 1894 aaPredicted RBP3.59□□□□□ -1.83
XRN1-211ENST00000477237 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.59□□□□□ -1.83
XRN1-211ENST00000477237 FAM90A10PA6NDY2 464 aa3.59□□□□□ -1.83
XRN1-211ENST00000477237 GOLGA8AA7E2F4 631 aa3.59□□□□□ -1.83
XRN1-211ENST00000477237 GTPBP1O00178 669 aaKnown RBP3.59□□□□□ -1.83
XRN1-211ENST00000477237 JUPP14923 745 aa3.59□□□□□ -1.83
XRN1-211ENST00000477237 PCSK6P29122 969 aa3.59□□□□□ -1.83
XRN1-211ENST00000477237 MCAMP43121 646 aa3.59□□□□□ -1.83
XRN1-211ENST00000477237 ANXA11P50995 505 aaKnown RBP3.59□□□□□ -1.83
XRN1-211ENST00000477237 CREMQ03060 361 aa3.59□□□□□ -1.83
XRN1-211ENST00000477237 PPP3CAQ08209 521 aa3.59□□□□□ -1.83
XRN1-211ENST00000477237 ADRM1Q16186 407 aa3.59□□□□□ -1.83
XRN1-211ENST00000477237 PREPLQ4J6C6 727 aaPredicted RBP3.59□□□□□ -1.83
XRN1-211ENST00000477237 CMIPQ8IY22 773 aa3.59□□□□□ -1.83
XRN1-211ENST00000477237 NSUN7Q8NE18 718 aaKnown RBP3.59□□□□□ -1.83
XRN1-211ENST00000477237 PRSS3P2Q8NHM4 247 aa3.59□□□□□ -1.83
XRN1-211ENST00000477237 SSH1Q8WYL5 1049 aa3.59□□□□□ -1.83
XRN1-211ENST00000477237 ACAP3Q96P50 834 aa3.59□□□□□ -1.83
XRN1-211ENST00000477237 GREM2Q9H772 168 aa3.59□□□□□ -1.83
XRN1-211ENST00000477237 IFT122Q9HBG6 1241 aa3.59□□□□□ -1.83
XRN1-211ENST00000477237 FANCLQ9NW38 375 aa3.59□□□□□ -1.83
XRN1-211ENST00000477237 DKK3Q9UBP4 350 aa3.59□□□□□ -1.83
XRN1-211ENST00000477237 NEU2Q9Y3R4 380 aa3.59□□□□□ -1.83
XRN1-211ENST00000477237 NR2E3Q9Y5X4 410 aa3.59□□□□□ -1.83
XRN1-211ENST00000477237 E5RJQ4 531 aa3.58□□□□□ -1.84
XRN1-211ENST00000477237 BCAR3O75815 825 aa3.58□□□□□ -1.84
XRN1-211ENST00000477237 ZFXP17010 805 aaPredicted RBP3.58□□□□□ -1.84
XRN1-211ENST00000477237 SCP2P22307 547 aa3.58□□□□□ -1.84
XRN1-211ENST00000477237 SLC6A4P31645 630 aa3.58□□□□□ -1.84
XRN1-211ENST00000477237 ID4P47928 161 aa3.58□□□□□ -1.84
XRN1-211ENST00000477237 SLC6A9P48067 706 aa3.58□□□□□ -1.84
XRN1-211ENST00000477237 HTR6P50406 440 aa3.58□□□□□ -1.84
XRN1-211ENST00000477237 MTM1Q13496 603 aa3.58□□□□□ -1.84
XRN1-211ENST00000477237 SEMA3AQ14563 771 aa3.58□□□□□ -1.84
XRN1-211ENST00000477237 TOR2AQ5JU69 321 aa3.58□□□□□ -1.84
XRN1-211ENST00000477237 C16orf86Q6ZW13 317 aa3.58□□□□□ -1.84
XRN1-211ENST00000477237 TMPRSS9Q7Z410 1059 aa3.58□□□□□ -1.84
XRN1-211ENST00000477237 MRPL10Q7Z7H8 261 aaKnown RBP3.58□□□□□ -1.84
XRN1-211ENST00000477237 CLRN3Q8NCR9 226 aa3.58□□□□□ -1.84
XRN1-211ENST00000477237 FBXO41Q8TF61 875 aa3.58□□□□□ -1.84
XRN1-211ENST00000477237 APPBP2Q92624 585 aa3.58□□□□□ -1.84
XRN1-211ENST00000477237 LRIG1Q96JA1 1093 aa3.58□□□□□ -1.84
XRN1-211ENST00000477237 ZC3H10Q96K80 434 aaKnown RBP3.58□□□□□ -1.84
XRN1-211ENST00000477237 LYZL4Q96KX0 146 aa3.58□□□□□ -1.84
XRN1-211ENST00000477237 C5orf34Q96MH7 638 aa3.58□□□□□ -1.84
XRN1-211ENST00000477237 ORAI2Q96SN7 254 aa3.58□□□□□ -1.84
XRN1-211ENST00000477237 SERINC4A6NH21 518 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms