RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 FGF14Q92915 247 aa12.55□□□□□ -0.4
LSM2-212ENST00000477182 PGBD4Q96DM1 585 aa12.55□□□□□ -0.4
LSM2-212ENST00000477182 BICD1Q96G01 975 aa12.55□□□□□ -0.4
LSM2-212ENST00000477182 FAM193BQ96PV7 902 aaPredicted RBP12.55□□□□□ -0.4
LSM2-212ENST00000477182 IER2Q9BTL4 223 aa12.55□□□□□ -0.4
LSM2-212ENST00000477182 HERC2P3Q9BVR0 1158 aa12.55□□□□□ -0.4
LSM2-212ENST00000477182 TARS2Q9BW92 718 aaKnown RBP12.55□□□□□ -0.4
LSM2-212ENST00000477182 MRPL4Q9BYD3 311 aaKnown RBP12.55□□□□□ -0.4
LSM2-212ENST00000477182 KCTD10Q9H3F6 313 aa12.55□□□□□ -0.4
LSM2-212ENST00000477182 TMEM206Q9H813 350 aa12.55□□□□□ -0.4
LSM2-212ENST00000477182 PRMT7Q9NVM4 692 aaPredicted RBP12.55□□□□□ -0.4
LSM2-212ENST00000477182 KANSL3Q9P2N6 904 aa12.55□□□□□ -0.4
LSM2-212ENST00000477182 CDH7Q9ULB5 785 aa12.55□□□□□ -0.4
LSM2-212ENST00000477182 ZMIZ1Q9ULJ6 1067 aa12.55□□□□□ -0.4
LSM2-212ENST00000477182 EXOC7Q9UPT5 735 aa12.55□□□□□ -0.4
LSM2-212ENST00000477182 ZFYVE26Q68DK2 2539 aa12.55□□□□□ -0.4
LSM2-212ENST00000477182 TISP43B9A030 160 aa12.54□□□□□ -0.4
LSM2-212ENST00000477182 ANKRD63C9JTQ0 380 aa12.54□□□□□ -0.4
LSM2-212ENST00000477182 ACKR2O00590 384 aa12.54□□□□□ -0.4
LSM2-212ENST00000477182 HNRNPDLO14979 420 aaKnown RBP12.54□□□□□ -0.4
LSM2-212ENST00000477182 TGFB1I1O43294 461 aa12.54□□□□□ -0.4
LSM2-212ENST00000477182 TSPAN1O60635 241 aa12.54□□□□□ -0.4
LSM2-212ENST00000477182 ZNF623O75123 536 aa12.54□□□□□ -0.4
LSM2-212ENST00000477182 OFD1O75665 1012 aa12.54□□□□□ -0.4
LSM2-212ENST00000477182 ERLIN2O94905 339 aa12.54□□□□□ -0.4
LSM2-212ENST00000477182 SFPQP23246 707 aaKnown RBP eCLIP12.54□□□□□ -0.4
LSM2-212ENST00000477182 TARSP26639 723 aaKnown RBP12.54□□□□□ -0.4
LSM2-212ENST00000477182 LIG4P49917 911 aa12.54□□□□□ -0.4
LSM2-212ENST00000477182 ADCY1Q08828 1119 aa12.54□□□□□ -0.4
LSM2-212ENST00000477182 PRPF4BQ13523 1007 aaKnown RBP12.54□□□□□ -0.4
LSM2-212ENST00000477182 TMEM132AQ24JP5 1023 aa12.54□□□□□ -0.4
LSM2-212ENST00000477182 ANKRD40Q6AI12 368 aa12.54□□□□□ -0.4
LSM2-212ENST00000477182 CENPPQ6IPU0 288 aa12.54□□□□□ -0.4
LSM2-212ENST00000477182 SLC39A4Q6P5W5 647 aa12.54□□□□□ -0.4
LSM2-212ENST00000477182 MAMSTRQ6ZN01 415 aa12.54□□□□□ -0.4
LSM2-212ENST00000477182 LPPQ93052 612 aa12.54□□□□□ -0.4
LSM2-212ENST00000477182 CPB2Q96IY4 423 aa12.54□□□□□ -0.4
LSM2-212ENST00000477182 MED15Q96RN5 788 aa12.54□□□□□ -0.4
LSM2-212ENST00000477182 RPP25Q9BUL9 199 aaKnown RBP12.54□□□□□ -0.4
LSM2-212ENST00000477182 NAT10Q9H0A0 1025 aaKnown RBP12.54□□□□□ -0.4
LSM2-212ENST00000477182 RXFP1Q9HBX9 757 aa12.54□□□□□ -0.4
LSM2-212ENST00000477182 CNTNAP2Q9UHC6 1331 aa12.54□□□□□ -0.4
LSM2-212ENST00000477182 TRIP11Q15643 1979 aa12.54□□□□□ -0.4
LSM2-212ENST00000477182 CITO14578 2027 aa12.54□□□□□ -0.4
LSM2-212ENST00000477182 ZZEF1O43149 2961 aa12.54□□□□□ -0.4
LSM2-212ENST00000477182 ANK1P16157 1881 aa12.53□□□□□ -0.4
LSM2-212ENST00000477182 PDXKO00764 312 aa12.53□□□□□ -0.4
LSM2-212ENST00000477182 CLIC2O15247 247 aa12.53□□□□□ -0.4
LSM2-212ENST00000477182 GDF9O60383 454 aa12.53□□□□□ -0.4
LSM2-212ENST00000477182 PIGRP01833 764 aa12.53□□□□□ -0.4
LSM2-212ENST00000477182 ARF4P18085 180 aaPredicted RBP12.53□□□□□ -0.4
LSM2-212ENST00000477182 CD72P21854 359 aa12.53□□□□□ -0.4
LSM2-212ENST00000477182 ERCC5P28715 1186 aaPredicted RBP12.53□□□□□ -0.4
LSM2-212ENST00000477182 GLUD2P49448 558 aa12.53□□□□□ -0.4
LSM2-212ENST00000477182 MTAPQ13126 283 aa12.53□□□□□ -0.4
LSM2-212ENST00000477182 SIM2Q14190 667 aaPredicted RBP12.53□□□□□ -0.4
LSM2-212ENST00000477182 ZCWPW2Q504Y3 356 aa12.53□□□□□ -0.4
LSM2-212ENST00000477182 CT47A1Q5JQC4 288 aaPredicted RBP12.53□□□□□ -0.4
LSM2-212ENST00000477182 ATF7IP2Q5U623 682 aa12.53□□□□□ -0.4
LSM2-212ENST00000477182 TTI2Q6NXR4 508 aa12.53□□□□□ -0.4
LSM2-212ENST00000477182 UNQ6494/PRO21346Q6UXR6 183 aa12.53□□□□□ -0.4
LSM2-212ENST00000477182 ZPBP2Q6X784 338 aa12.53□□□□□ -0.4
LSM2-212ENST00000477182 TPRG1Q6ZUI0 275 aa12.53□□□□□ -0.4
LSM2-212ENST00000477182 HS2ST1Q7LGA3 356 aa12.53□□□□□ -0.4
LSM2-212ENST00000477182 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.53□□□□□ -0.4
LSM2-212ENST00000477182 CDR2LQ86X02 465 aaPredicted RBP12.53□□□□□ -0.4
LSM2-212ENST00000477182 ZNF280BQ86YH2 543 aa12.53□□□□□ -0.4
LSM2-212ENST00000477182 KDF1Q8NAX2 398 aaPredicted RBP12.53□□□□□ -0.4
LSM2-212ENST00000477182 ST13P5Q8NFI4 369 aaPredicted RBP12.53□□□□□ -0.4
LSM2-212ENST00000477182 ZBTB45Q96K62 511 aaPredicted RBP12.53□□□□□ -0.4
LSM2-212ENST00000477182 PRIMPOLQ96LW4 560 aa12.53□□□□□ -0.4
LSM2-212ENST00000477182 ACO2Q99798 780 aaKnown RBP12.53□□□□□ -0.4
LSM2-212ENST00000477182 TSG101Q99816 390 aa12.53□□□□□ -0.4
LSM2-212ENST00000477182 AGPAT3Q9NRZ7 376 aa12.53□□□□□ -0.4
LSM2-212ENST00000477182 FAM105AQ9NUU6 356 aa12.53□□□□□ -0.4
LSM2-212ENST00000477182 RWDD2AQ9UIY3 292 aa12.53□□□□□ -0.4
LSM2-212ENST00000477182 SPEGQ15772 3267 aa12.53□□□□□ -0.4
LSM2-212ENST00000477182 BICDL2A1A5D9 508 aa12.52□□□□□ -0.41
LSM2-212ENST00000477182 TMEM8BA6NDV4 472 aa12.52□□□□□ -0.41
LSM2-212ENST00000477182 NRP1O14786 923 aa12.52□□□□□ -0.41
LSM2-212ENST00000477182 CALUO43852 315 aaPredicted RBP12.52□□□□□ -0.41
LSM2-212ENST00000477182 SPATA31D3P0C874 917 aa12.52□□□□□ -0.41
LSM2-212ENST00000477182 TDGF1P13385 188 aa12.52□□□□□ -0.41
LSM2-212ENST00000477182 CNR2P34972 360 aa12.52□□□□□ -0.41
LSM2-212ENST00000477182 MATR3P43243 847 aaKnown RBP eCLIP12.52□□□□□ -0.41
LSM2-212ENST00000477182 ZNF165P49910 485 aa12.52□□□□□ -0.41
LSM2-212ENST00000477182 CCR3P51677 355 aa12.52□□□□□ -0.41
LSM2-212ENST00000477182 PCBP1Q15365 356 aaKnown RBP eCLIP12.52□□□□□ -0.418e-7■■■■□ 20.5
LSM2-212ENST00000477182 EEF1DP3Q658K8 133 aa12.52□□□□□ -0.41
LSM2-212ENST00000477182 SPATA31D4Q6ZUB0 917 aa12.52□□□□□ -0.41
LSM2-212ENST00000477182 AOPEPQ8N6M6 819 aa12.52□□□□□ -0.41
LSM2-212ENST00000477182 DUSP9Q99956 384 aaKnown RBP12.52□□□□□ -0.41
LSM2-212ENST00000477182 CBX8Q9HC52 389 aa12.52□□□□□ -0.41
LSM2-212ENST00000477182 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.52□□□□□ -0.41
LSM2-212ENST00000477182 AGPAT5Q9NUQ2 364 aa12.52□□□□□ -0.41
LSM2-212ENST00000477182 ANKFY1Q9P2R3 1169 aa12.52□□□□□ -0.41
LSM2-212ENST00000477182 PIN4Q9Y237 131 aaKnown RBP12.52□□□□□ -0.41
LSM2-212ENST00000477182 COL4A3Q01955 1670 aa12.51□□□□□ -0.41
LSM2-212ENST00000477182 TM4SF5O14894 197 aa12.51□□□□□ -0.41
LSM2-212ENST00000477182 N4BP3O15049 544 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms