RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 TXNDC9O14530 226 aa14.57□□□□□ -0.08
HDAC1-206ENST00000476391 ADCY8P40145 1251 aa14.57□□□□□ -0.08
HDAC1-206ENST00000476391 MAGEA4P43358 317 aa14.57□□□□□ -0.08
HDAC1-206ENST00000476391 PFKPQ01813 784 aa14.57□□□□□ -0.08
HDAC1-206ENST00000476391 KRT81Q14533 505 aa14.57□□□□□ -0.08
HDAC1-206ENST00000476391 SEPT7Q16181 437 aaKnown RBP14.57□□□□□ -0.08
HDAC1-206ENST00000476391 FBXL19Q6PCT2 694 aa14.57□□□□□ -0.08
HDAC1-206ENST00000476391 ANKS1BQ7Z6G8 1248 aa14.57□□□□□ -0.08
HDAC1-206ENST00000476391 NOP9Q86U38 636 aaKnown RBP14.57□□□□□ -0.08
HDAC1-206ENST00000476391 GDPD5Q8WTR4 605 aa14.57□□□□□ -0.08
HDAC1-206ENST00000476391 Q9H521 79 aa14.57□□□□□ -0.08
HDAC1-206ENST00000476391 ZNF696Q9H7X3 374 aa14.57□□□□□ -0.08
HDAC1-206ENST00000476391 HESX1Q9UBX0 185 aa14.57□□□□□ -0.08
HDAC1-206ENST00000476391 CASQ2O14958 399 aaPredicted RBP14.56□□□□□ -0.08
HDAC1-206ENST00000476391 TM9SF1O15321 606 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 DKC1O60832 514 aaKnown RBP eCLIP14.56□□□□□ -0.08
HDAC1-206ENST00000476391 MTA2O94776 668 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 TNFAIP8O95379 198 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 IL1BP01584 269 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 CTSWP56202 376 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 ITGA7Q13683 1181 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 GRM4Q14833 912 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 LRRC36Q1X8D7 754 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 USP41Q3LFD5 358 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 CCDC153Q494R4 210 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 HERC4Q5GLZ8 1057 aaPredicted RBP14.56□□□□□ -0.08
HDAC1-206ENST00000476391 LPCAT4Q643R3 524 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 ADGRA1Q86SQ6 560 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 AHI1Q8N157 1196 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 CCT7Q99832 543 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 RIOK1Q9BRS2 568 aaKnown RBP14.56□□□□□ -0.08
HDAC1-206ENST00000476391 GRIP2Q9C0E4 1043 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 NACA2Q9H009 215 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 C6orf50Q9HD87 102 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 GPCPD1Q9NPB8 672 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 TAS2R14Q9NYV8 317 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 HEY1Q9Y5J3 304 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 SPECC1L-ADORA2AF8WAN1 911 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 CD48P09326 243 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 DLATP10515 647 aaKnown RBP14.56□□□□□ -0.08
HDAC1-206ENST00000476391 CDH2P19022 906 aaPredicted RBP14.56□□□□□ -0.08
HDAC1-206ENST00000476391 NR1H2P55055 460 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 NAA20P61599 178 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 DRAP1Q14919 205 aaPredicted RBP14.56□□□□□ -0.08
HDAC1-206ENST00000476391 MEX3CQ5U5Q3 659 aaKnown RBP14.56□□□□□ -0.08
HDAC1-206ENST00000476391 C3orf67Q6ZVT6 689 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 TMC7Q7Z402 723 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 TTC7BQ86TV6 843 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 NLRX1Q86UT6 975 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 TBCKQ8TEA7 893 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 GIPC3Q8TF64 312 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 JADE3Q92613 823 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 SLC35C1Q96A29 364 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 COX4I2Q96KJ9 171 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 CGREF1Q99674 301 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 NUDT12Q9BQG2 462 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 UBAP1Q9NZ09 502 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 SLC24A2Q9UI40 661 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 MYPNQ86TC9 1320 aa14.56□□□□□ -0.08
HDAC1-206ENST00000476391 POTEMA6NI47 508 aa14.55□□□□□ -0.08
HDAC1-206ENST00000476391 LSM1O15116 133 aaKnown RBP14.55□□□□□ -0.08
HDAC1-206ENST00000476391 SLC16A3O15427 465 aaKnown RBP14.55□□□□□ -0.08
HDAC1-206ENST00000476391 GSTT2P0CG29 244 aa14.55□□□□□ -0.08
HDAC1-206ENST00000476391 GSTT2BP0CG30 244 aa14.55□□□□□ -0.08
HDAC1-206ENST00000476391 COL6A2P12110 1019 aa14.55□□□□□ -0.08
HDAC1-206ENST00000476391 ADRA1DP25100 572 aa14.55□□□□□ -0.08
HDAC1-206ENST00000476391 PEX2P28328 305 aa14.55□□□□□ -0.08
HDAC1-206ENST00000476391 CPA2P48052 419 aa14.55□□□□□ -0.08
HDAC1-206ENST00000476391 VCPP55072 806 aaKnown RBP14.55□□□□□ -0.08
HDAC1-206ENST00000476391 GPC5P78333 572 aa14.55□□□□□ -0.08
HDAC1-206ENST00000476391 MESDQ14696 234 aa14.55□□□□□ -0.08
HDAC1-206ENST00000476391 ZNF362Q5T0B9 420 aaPredicted RBP14.55□□□□□ -0.08
HDAC1-206ENST00000476391 TRIM50Q86XT4 487 aa14.55□□□□□ -0.08
HDAC1-206ENST00000476391 RIN3Q8TB24 985 aa14.55□□□□□ -0.08
HDAC1-206ENST00000476391 C1orf54Q8WWF1 131 aa14.55□□□□□ -0.08
HDAC1-206ENST00000476391 PWWP2AQ96N64 755 aa14.55□□□□□ -0.08
HDAC1-206ENST00000476391 MRPL1Q9BYD6 325 aaKnown RBP14.55□□□□□ -0.08
HDAC1-206ENST00000476391 CRNKL1Q9BZJ0 848 aaKnown RBP14.55□□□□□ -0.08
HDAC1-206ENST00000476391 NMUR2Q9GZQ4 415 aa14.55□□□□□ -0.08
HDAC1-206ENST00000476391 TAGLN3Q9UI15 199 aa14.55□□□□□ -0.08
HDAC1-206ENST00000476391 POC1B-GALNT4F8VUJ3 575 aa14.55□□□□□ -0.08
HDAC1-206ENST00000476391 FDFT1P37268 417 aa14.55□□□□□ -0.08
HDAC1-206ENST00000476391 NCOA4Q13772 614 aa14.55□□□□□ -0.08
HDAC1-206ENST00000476391 TBCCQ15814 346 aa14.55□□□□□ -0.08
HDAC1-206ENST00000476391 FAM47AQ5JRC9 791 aa14.55□□□□□ -0.08
HDAC1-206ENST00000476391 EFHC1Q5JVL4 640 aa14.55□□□□□ -0.08
HDAC1-206ENST00000476391 CYP4F22Q6NT55 531 aa14.55□□□□□ -0.08
HDAC1-206ENST00000476391 RNF111Q6ZNA4 994 aa14.55□□□□□ -0.08
HDAC1-206ENST00000476391 ANO5Q75V66 913 aa14.55□□□□□ -0.08
HDAC1-206ENST00000476391 CCDC89Q8N998 374 aa14.55□□□□□ -0.08
HDAC1-206ENST00000476391 CLPTM1LQ96KA5 538 aa14.55□□□□□ -0.08
HDAC1-206ENST00000476391 RBM15Q96T37 977 aaKnown RBP eCLIP14.55□□□□□ -0.087e-7■■■■□ 24.8
HDAC1-206ENST00000476391 NRDE2Q9H7Z3 1164 aa14.55□□□□□ -0.08
HDAC1-206ENST00000476391 ADAMTS6Q9UKP5 1117 aa14.55□□□□□ -0.08
HDAC1-206ENST00000476391 PADI4Q9UM07 663 aa14.55□□□□□ -0.08
HDAC1-206ENST00000476391 AXIN2Q9Y2T1 843 aa14.55□□□□□ -0.08
HDAC1-206ENST00000476391 POTECB2RU33 542 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 CYTH3O43739 400 aa14.54□□□□□ -0.08
HDAC1-206ENST00000476391 CALUO43852 315 aaPredicted RBP14.54□□□□□ -0.08
HDAC1-206ENST00000476391 KRT4P19013 534 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms