RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 TDGF1P13385 188 aa11.77□□□□□ -0.53
CDRT1-205ENST00000475944 TYMPP19971 482 aa11.77□□□□□ -0.53
CDRT1-205ENST00000475944 PAX3P23760 479 aa11.77□□□□□ -0.53
CDRT1-205ENST00000475944 CCNE1P24864 410 aa11.77□□□□□ -0.53
CDRT1-205ENST00000475944 TNFSF9P41273 254 aa11.77□□□□□ -0.53
CDRT1-205ENST00000475944 CXCL12P48061 93 aa11.77□□□□□ -0.53
CDRT1-205ENST00000475944 CACNB1Q02641 598 aaPredicted RBP11.77□□□□□ -0.53
CDRT1-205ENST00000475944 FCHO2Q0JRZ9 810 aa11.77□□□□□ -0.53
CDRT1-205ENST00000475944 DUSP4Q13115 394 aa11.77□□□□□ -0.53
CDRT1-205ENST00000475944 MYBPC2Q14324 1141 aa11.77□□□□□ -0.53
CDRT1-205ENST00000475944 LRRC32Q14392 662 aa11.77□□□□□ -0.53
CDRT1-205ENST00000475944 TMEM119Q4V9L6 283 aa11.77□□□□□ -0.53
CDRT1-205ENST00000475944 ARL6IP4Q66PJ3 421 aaKnown RBP11.77□□□□□ -0.53
CDRT1-205ENST00000475944 OVOS1Q6IE37 1185 aa11.77□□□□□ -0.53
CDRT1-205ENST00000475944 ARMCX5Q6P1M9 558 aa11.77□□□□□ -0.53
CDRT1-205ENST00000475944 TMC8Q8IU68 726 aa11.77□□□□□ -0.53
CDRT1-205ENST00000475944 CELF5Q8N6W0 485 aaKnown RBP11.77□□□□□ -0.53
CDRT1-205ENST00000475944 LRRC3Q9BY71 257 aa11.77□□□□□ -0.53
CDRT1-205ENST00000475944 DNAJC25Q9H1X3 360 aa11.77□□□□□ -0.53
CDRT1-205ENST00000475944 NCANO14594 1321 aa11.77□□□□□ -0.53
CDRT1-205ENST00000475944 NPHP3-ACAD11A0A0J9YXS1 232 aa11.76□□□□□ -0.53
CDRT1-205ENST00000475944 MTMR11A4FU01 709 aa11.76□□□□□ -0.53
CDRT1-205ENST00000475944 DPYSL4O14531 572 aa11.76□□□□□ -0.53
CDRT1-205ENST00000475944 SLC26A4O43511 780 aa11.76□□□□□ -0.53
CDRT1-205ENST00000475944 FAM13AO94988 1023 aa11.76□□□□□ -0.53
CDRT1-205ENST00000475944 VNN2O95498 520 aa11.76□□□□□ -0.53
CDRT1-205ENST00000475944 PIGRP01833 764 aa11.76□□□□□ -0.53
CDRT1-205ENST00000475944 ABCD1P33897 745 aa11.76□□□□□ -0.53
CDRT1-205ENST00000475944 KPNA1P52294 538 aaPredicted RBP11.76□□□□□ -0.53
CDRT1-205ENST00000475944 ENOX2Q16206 610 aaKnown RBP11.76□□□□□ -0.53
CDRT1-205ENST00000475944 ARHGAP15Q53QZ3 475 aa11.76□□□□□ -0.53
CDRT1-205ENST00000475944 ARSHQ5FYA8 562 aa11.76□□□□□ -0.53
CDRT1-205ENST00000475944 SPATA1Q5VX52 437 aa11.76□□□□□ -0.53
CDRT1-205ENST00000475944 LAIR1Q6GTX8 287 aa11.76□□□□□ -0.53
CDRT1-205ENST00000475944 CENPPQ6IPU0 288 aa11.76□□□□□ -0.53
CDRT1-205ENST00000475944 ITIH5Q86UX2 942 aa11.76□□□□□ -0.53
CDRT1-205ENST00000475944 CD302Q8IX05 232 aa11.76□□□□□ -0.53
CDRT1-205ENST00000475944 TMEM130Q8N3G9 435 aa11.76□□□□□ -0.53
CDRT1-205ENST00000475944 SPEM1Q8N4L4 309 aa11.76□□□□□ -0.53
CDRT1-205ENST00000475944 FAM200AQ8TCP9 573 aa11.76□□□□□ -0.53
CDRT1-205ENST00000475944 PSMG2Q969U7 264 aa11.76□□□□□ -0.53
CDRT1-205ENST00000475944 FAM212AQ96EL1 285 aa11.76□□□□□ -0.53
CDRT1-205ENST00000475944 CALML4Q96GE6 196 aa11.76□□□□□ -0.53
CDRT1-205ENST00000475944 AK8Q96MA6 479 aa11.76□□□□□ -0.53
CDRT1-205ENST00000475944 KIF2CQ99661 725 aa11.76□□□□□ -0.53
CDRT1-205ENST00000475944 CRISPLD1Q9H336 500 aa11.76□□□□□ -0.53
CDRT1-205ENST00000475944 HSFX1Q9UBD0 423 aa11.76□□□□□ -0.53
CDRT1-205ENST00000475944 TBX20Q9UMR3 447 aa11.76□□□□□ -0.53
CDRT1-205ENST00000475944 FRYLO94915 3013 aa11.75□□□□□ -0.53
CDRT1-205ENST00000475944 SLC38A8A6NNN8 435 aa11.75□□□□□ -0.53
CDRT1-205ENST00000475944 H3BQV1 296 aa11.75□□□□□ -0.53
CDRT1-205ENST00000475944 K7ENM7 598 aa11.75□□□□□ -0.53
CDRT1-205ENST00000475944 FAM189A1O60320 539 aa11.75□□□□□ -0.53
CDRT1-205ENST00000475944 ADRB2P07550 413 aa11.75□□□□□ -0.53
CDRT1-205ENST00000475944 TGM1P22735 817 aa11.75□□□□□ -0.53
CDRT1-205ENST00000475944 GUCY2FP51841 1108 aa11.75□□□□□ -0.53
CDRT1-205ENST00000475944 ATXN1P54253 815 aaKnown RBP11.75□□□□□ -0.53
CDRT1-205ENST00000475944 LILRA4P59901 499 aa11.75□□□□□ -0.53
CDRT1-205ENST00000475944 SATB1Q01826 763 aa11.75□□□□□ -0.53
CDRT1-205ENST00000475944 VEPH1Q14D04 833 aa11.75□□□□□ -0.53
CDRT1-205ENST00000475944 ARHGAP29Q52LW3 1261 aa11.75□□□□□ -0.53
CDRT1-205ENST00000475944 JADE1Q6IE81 842 aa11.75□□□□□ -0.53
CDRT1-205ENST00000475944 GPBP1Q86WP2 473 aa11.75□□□□□ -0.53
CDRT1-205ENST00000475944 RALGPS2Q86X27 583 aaPredicted RBP11.75□□□□□ -0.53
CDRT1-205ENST00000475944 ARID3BQ8IVW6 561 aaPredicted RBP11.75□□□□□ -0.53
CDRT1-205ENST00000475944 MYCT1Q8N699 235 aa11.75□□□□□ -0.53
CDRT1-205ENST00000475944 ATAD1Q8NBU5 361 aa11.75□□□□□ -0.53
CDRT1-205ENST00000475944 SENP8Q96LD8 212 aa11.75□□□□□ -0.53
CDRT1-205ENST00000475944 REEP2Q9BRK0 252 aa11.75□□□□□ -0.53
CDRT1-205ENST00000475944 RTKNQ9BST9 563 aa11.75□□□□□ -0.53
CDRT1-205ENST00000475944 MSTO1Q9BUK6 570 aa11.75□□□□□ -0.53
CDRT1-205ENST00000475944 ATXN3LQ9H3M9 355 aa11.75□□□□□ -0.53
CDRT1-205ENST00000475944 PARVGQ9HBI0 331 aa11.75□□□□□ -0.53
CDRT1-205ENST00000475944 OBP2AQ9NY56 170 aa11.75□□□□□ -0.53
CDRT1-205ENST00000475944 SLC27A5Q9Y2P5 690 aa11.75□□□□□ -0.53
CDRT1-205ENST00000475944 A0A0B4J269 797 aa11.74□□□□□ -0.53
CDRT1-205ENST00000475944 MYBPHLA2RUH7 354 aa11.74□□□□□ -0.53
CDRT1-205ENST00000475944 SPECC1L-ADORA2AF8WAN1 911 aa11.74□□□□□ -0.53
CDRT1-205ENST00000475944 PPEF2O14830 753 aa11.74□□□□□ -0.53
CDRT1-205ENST00000475944 TRAK2O60296 914 aa11.74□□□□□ -0.53
CDRT1-205ENST00000475944 LRP3O75074 770 aa11.74□□□□□ -0.53
CDRT1-205ENST00000475944 PAPSS2O95340 614 aaPredicted RBP11.74□□□□□ -0.53
CDRT1-205ENST00000475944 KRT18P05783 430 aaKnown RBP11.74□□□□□ -0.53
CDRT1-205ENST00000475944 RETP07949 1114 aa11.74□□□□□ -0.53
CDRT1-205ENST00000475944 GABRR2P28476 465 aa11.74□□□□□ -0.53
CDRT1-205ENST00000475944 CTHP32929 405 aa11.74□□□□□ -0.53
CDRT1-205ENST00000475944 CNR2P34972 360 aa11.74□□□□□ -0.53
CDRT1-205ENST00000475944 UBA7P41226 1012 aa11.74□□□□□ -0.53
CDRT1-205ENST00000475944 TUFMP49411 452 aaKnown RBP11.74□□□□□ -0.53
CDRT1-205ENST00000475944 ZNF131P52739 623 aa11.74□□□□□ -0.53
CDRT1-205ENST00000475944 SIM2Q14190 667 aaPredicted RBP11.74□□□□□ -0.53
CDRT1-205ENST00000475944 GAS6Q14393 721 aa11.74□□□□□ -0.53
CDRT1-205ENST00000475944 LPAL2Q16609 132 aa11.74□□□□□ -0.53
CDRT1-205ENST00000475944 DGKKQ5KSL6 1271 aa11.74□□□□□ -0.53
CDRT1-205ENST00000475944 STXBP5Q5T5C0 1151 aa11.74□□□□□ -0.53
CDRT1-205ENST00000475944 GPR158Q5T848 1215 aa11.74□□□□□ -0.53
CDRT1-205ENST00000475944 C9orf57Q5W0N0 161 aa11.74□□□□□ -0.53
CDRT1-205ENST00000475944 PRR23BQ6ZRT6 265 aa11.74□□□□□ -0.53
CDRT1-205ENST00000475944 GAREM2Q75VX8 874 aa11.74□□□□□ -0.53
CDRT1-205ENST00000475944 DNAJB7Q7Z6W7 309 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms