RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 LNX1Q8TBB1 728 aaPredicted RBP16.29■□□□□ 0.2
SNX13-207ENST00000475800 CASP10Q92851 521 aa16.29■□□□□ 0.2
SNX13-207ENST00000475800 APOL5Q9BWW9 433 aa16.29■□□□□ 0.2
SNX13-207ENST00000475800 METTL14Q9HCE5 456 aaKnown RBP16.29■□□□□ 0.2
SNX13-207ENST00000475800 DPP7Q9UHL4 492 aa16.29■□□□□ 0.2
SNX13-207ENST00000475800 RWDD2AQ9UIY3 292 aa16.29■□□□□ 0.2
SNX13-207ENST00000475800 BACE2Q9Y5Z0 518 aa16.29■□□□□ 0.2
SNX13-207ENST00000475800 LRRIQ3A6PVS8 624 aaPredicted RBP16.28■□□□□ 0.2
SNX13-207ENST00000475800 KPNA7A9QM74 516 aa16.28■□□□□ 0.2
SNX13-207ENST00000475800 I3L4J1 428 aa16.28■□□□□ 0.2
SNX13-207ENST00000475800 PPEF2O14830 753 aa16.28■□□□□ 0.2
SNX13-207ENST00000475800 TEX28O15482 410 aa16.28■□□□□ 0.2
SNX13-207ENST00000475800 PHACTR2O75167 634 aa16.28■□□□□ 0.2
SNX13-207ENST00000475800 GNA14O95837 355 aa16.28■□□□□ 0.2
SNX13-207ENST00000475800 IGFBP6P24592 240 aaPredicted RBP16.28■□□□□ 0.2
SNX13-207ENST00000475800 GTF2H1P32780 548 aa16.28■□□□□ 0.2
SNX13-207ENST00000475800 TRPC3Q13507 836 aa16.28■□□□□ 0.2
SNX13-207ENST00000475800 VARS2Q5ST30 1063 aaKnown RBP16.28■□□□□ 0.2
SNX13-207ENST00000475800 ZNF280DQ6N043 979 aa16.28■□□□□ 0.2
SNX13-207ENST00000475800 TMEM184AQ6ZMB5 413 aa16.28■□□□□ 0.2
SNX13-207ENST00000475800 FILIP1Q7Z7B0 1213 aa16.28■□□□□ 0.2
SNX13-207ENST00000475800 CXorf38Q8TB03 319 aa16.28■□□□□ 0.2
SNX13-207ENST00000475800 PLEKHO2Q8TD55 490 aa16.28■□□□□ 0.2
SNX13-207ENST00000475800 B3GALT6Q96L58 329 aa16.28■□□□□ 0.2
SNX13-207ENST00000475800 SENP8Q96LD8 212 aa16.28■□□□□ 0.2
SNX13-207ENST00000475800 POP1Q99575 1024 aaKnown RBP16.28■□□□□ 0.2
SNX13-207ENST00000475800 GZF1Q9H116 711 aaPredicted RBP16.28■□□□□ 0.2
SNX13-207ENST00000475800 CLEC1BQ9P126 229 aa16.28■□□□□ 0.2
SNX13-207ENST00000475800 MTRRQ9UBK8 725 aa16.28■□□□□ 0.2
SNX13-207ENST00000475800 PRKAG3Q9UGI9 489 aa16.28■□□□□ 0.2
SNX13-207ENST00000475800 SIX4Q9UIU6 781 aa16.28■□□□□ 0.2
SNX13-207ENST00000475800 MUC6Q6W4X9 2439 aa16.28■□□□□ 0.2
SNX13-207ENST00000475800 TSC2P49815 1807 aa16.27■□□□□ 0.2
SNX13-207ENST00000475800 C19orf67A6NJJ6 358 aa16.27■□□□□ 0.2
SNX13-207ENST00000475800 CYP11A1P05108 521 aa16.27■□□□□ 0.2
SNX13-207ENST00000475800 ERCC5P28715 1186 aaPredicted RBP16.27■□□□□ 0.2
SNX13-207ENST00000475800 ATICP31939 592 aa16.27■□□□□ 0.2
SNX13-207ENST00000475800 YWHAHQ04917 246 aaPredicted RBP16.27■□□□□ 0.2
SNX13-207ENST00000475800 BIRC3Q13489 604 aa16.27■□□□□ 0.2
SNX13-207ENST00000475800 KCNC3Q14003 757 aa16.27■□□□□ 0.2
SNX13-207ENST00000475800 MRPL58Q14197 206 aaKnown RBP16.27■□□□□ 0.2
SNX13-207ENST00000475800 KLHL40Q2TBA0 621 aa16.27■□□□□ 0.2
SNX13-207ENST00000475800 SASS6Q6UVJ0 657 aa16.27■□□□□ 0.2
SNX13-207ENST00000475800 PRSS55Q6UWB4 352 aaPredicted RBP16.27■□□□□ 0.2
SNX13-207ENST00000475800 FRMD5Q7Z6J6 570 aa16.27■□□□□ 0.2
SNX13-207ENST00000475800 METTL23Q86XA0 190 aa16.27■□□□□ 0.2
SNX13-207ENST00000475800 RNF135Q8IUD6 432 aa16.27■□□□□ 0.2
SNX13-207ENST00000475800 SPATA18Q8TC71 538 aa16.27■□□□□ 0.2
SNX13-207ENST00000475800 BORCS6Q96GS4 357 aa16.27■□□□□ 0.2
SNX13-207ENST00000475800 HPDLQ96IR7 371 aa16.27■□□□□ 0.2
SNX13-207ENST00000475800 DUSP9Q99956 384 aaKnown RBP16.27■□□□□ 0.2
SNX13-207ENST00000475800 DZANK1Q9NVP4 752 aa16.27■□□□□ 0.2
SNX13-207ENST00000475800 GDAP2Q9NXN4 497 aa16.27■□□□□ 0.2
SNX13-207ENST00000475800 ARMCX3Q9UH62 379 aaPredicted RBP16.27■□□□□ 0.2
SNX13-207ENST00000475800 HCFC2Q9Y5Z7 792 aa16.27■□□□□ 0.2
SNX13-207ENST00000475800 PLXNA3P51805 1871 aa16.27■□□□□ 0.19
SNX13-207ENST00000475800 CYB561D2O14569 222 aa16.26■□□□□ 0.19
SNX13-207ENST00000475800 SPTLC1O15269 473 aa16.26■□□□□ 0.19
SNX13-207ENST00000475800 HUS1O60921 280 aa16.26■□□□□ 0.19
SNX13-207ENST00000475800 OAZ2O95190 189 aa16.26■□□□□ 0.19
SNX13-207ENST00000475800 STAU1O95793 577 aaKnown RBP16.26■□□□□ 0.19
SNX13-207ENST00000475800 GLP2RO95838 553 aa16.26■□□□□ 0.19
SNX13-207ENST00000475800 GLUD1P00367 558 aa16.26■□□□□ 0.19
SNX13-207ENST00000475800 C4BPAP04003 597 aaKnown RBP16.26■□□□□ 0.19
SNX13-207ENST00000475800 HOXB8P17481 243 aaPredicted RBP16.26■□□□□ 0.19
SNX13-207ENST00000475800 SP100P23497 879 aaPredicted RBP16.26■□□□□ 0.19
SNX13-207ENST00000475800 CLCN4P51793 760 aa16.26■□□□□ 0.19
SNX13-207ENST00000475800 STX17P56962 302 aa16.26■□□□□ 0.19
SNX13-207ENST00000475800 ZACNQ401N2 412 aa16.26■□□□□ 0.19
SNX13-207ENST00000475800 CTXN3Q4LDR2 81 aa16.26■□□□□ 0.19
SNX13-207ENST00000475800 LLGL2Q6P1M3 1020 aa16.26■□□□□ 0.19
SNX13-207ENST00000475800 DPH6Q7L8W6 267 aa16.26■□□□□ 0.19
SNX13-207ENST00000475800 TMEM86AQ8N2M4 240 aa16.26■□□□□ 0.19
SNX13-207ENST00000475800 TMEM130Q8N3G9 435 aa16.26■□□□□ 0.19
SNX13-207ENST00000475800 SLC22A17Q8WUG5 538 aa16.26■□□□□ 0.19
SNX13-207ENST00000475800 HDAC7Q8WUI4 952 aa16.26■□□□□ 0.19
SNX13-207ENST00000475800 ZNF516Q92618 1163 aa16.26■□□□□ 0.19
SNX13-207ENST00000475800 MSLNLQ96KJ4 702 aa16.26■□□□□ 0.19
SNX13-207ENST00000475800 RPGRIP1Q96KN7 1286 aa16.26■□□□□ 0.19
SNX13-207ENST00000475800 OR6C75A6NL08 312 aa16.25■□□□□ 0.19
SNX13-207ENST00000475800 DLG4P78352 724 aa16.25■□□□□ 0.19
SNX13-207ENST00000475800 RAB33AQ14088 237 aa16.25■□□□□ 0.19
SNX13-207ENST00000475800 SKOR2Q2VWA4 1001 aaPredicted RBP16.25■□□□□ 0.19
SNX13-207ENST00000475800 DPCR1Q3MIW9 517 aa16.25■□□□□ 0.19
SNX13-207ENST00000475800 CCDC40Q4G0X9 1142 aa16.25■□□□□ 0.19
SNX13-207ENST00000475800 TDRD10Q5VZ19 366 aaKnown RBP16.25■□□□□ 0.19
SNX13-207ENST00000475800 OVOS1Q6IE37 1185 aa16.25■□□□□ 0.19
SNX13-207ENST00000475800 SLC8B1Q6J4K2 584 aa16.25■□□□□ 0.19
SNX13-207ENST00000475800 HFE2Q6ZVN8 426 aa16.25■□□□□ 0.19
SNX13-207ENST00000475800 SV2AQ7L0J3 742 aa16.25■□□□□ 0.19
SNX13-207ENST00000475800 TOP6BLQ8N6T0 577 aa16.25■□□□□ 0.19
SNX13-207ENST00000475800 TAF4BQ92750 862 aa16.25■□□□□ 0.19
SNX13-207ENST00000475800 EEF2KMTQ96G04 330 aa16.25■□□□□ 0.19
SNX13-207ENST00000475800 CLSTN3Q9BQT9 956 aa16.25■□□□□ 0.19
SNX13-207ENST00000475800 PLEKHA4Q9H4M7 779 aa16.25■□□□□ 0.19
SNX13-207ENST00000475800 VRTNQ9H8Y1 702 aa16.25■□□□□ 0.19
SNX13-207ENST00000475800 TMEM8AQ9HCN3 771 aa16.25■□□□□ 0.19
SNX13-207ENST00000475800 ANO10Q9NW15 660 aa16.25■□□□□ 0.19
SNX13-207ENST00000475800 USP15Q9Y4E8 981 aaPredicted RBP16.25■□□□□ 0.19
SNX13-207ENST00000475800 TRIOO75962 3097 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms