RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 PLEKHA5Q9HAU0 1116 aa12.84□□□□□ -0.35
CLIP2-204ENST00000474962 PCDHA5Q9Y5H7 936 aa12.84□□□□□ -0.35
CLIP2-204ENST00000474962 TIMM13Q9Y5L4 95 aaPredicted RBP12.84□□□□□ -0.35
CLIP2-204ENST00000474962 ZFP37Q9Y6Q3 630 aaPredicted RBP12.84□□□□□ -0.35
CLIP2-204ENST00000474962 PTPRZ1P23471 2315 aaPredicted RBP12.84□□□□□ -0.35
CLIP2-204ENST00000474962 NOTCH4Q99466 2003 aa12.83□□□□□ -0.36
CLIP2-204ENST00000474962 A0A0B4J269 797 aa12.83□□□□□ -0.36
CLIP2-204ENST00000474962 ANKRD63C9JTQ0 380 aa12.83□□□□□ -0.36
CLIP2-204ENST00000474962 H7C4K7 107 aa12.83□□□□□ -0.36
CLIP2-204ENST00000474962 PRRG1O14668 218 aa12.83□□□□□ -0.36
CLIP2-204ENST00000474962 KLRC4O43908 158 aa12.83□□□□□ -0.36
CLIP2-204ENST00000474962 FAM189A1O60320 539 aa12.83□□□□□ -0.36
CLIP2-204ENST00000474962 PRPF6O94906 941 aaKnown RBP12.83□□□□□ -0.36
CLIP2-204ENST00000474962 ATF2P15336 505 aa12.83□□□□□ -0.36
CLIP2-204ENST00000474962 ELF1P32519 619 aa12.83□□□□□ -0.36
CLIP2-204ENST00000474962 STIM1Q13586 685 aa12.83□□□□□ -0.36
CLIP2-204ENST00000474962 ENOX2Q16206 610 aaKnown RBP12.83□□□□□ -0.36
CLIP2-204ENST00000474962 SLC5A9Q2M3M2 681 aa12.83□□□□□ -0.36
CLIP2-204ENST00000474962 CTXN3Q4LDR2 81 aa12.83□□□□□ -0.36
CLIP2-204ENST00000474962 SLFN12LQ6IEE8 588 aa12.83□□□□□ -0.36
CLIP2-204ENST00000474962 RTL10Q7L3V2 364 aa12.83□□□□□ -0.36
CLIP2-204ENST00000474962 GPT2Q8TD30 523 aa12.83□□□□□ -0.36
CLIP2-204ENST00000474962 ERCC4Q92889 916 aaPredicted RBP12.83□□□□□ -0.36
CLIP2-204ENST00000474962 FAM212AQ96EL1 285 aa12.83□□□□□ -0.36
CLIP2-204ENST00000474962 MCRS1Q96EZ8 462 aa12.83□□□□□ -0.36
CLIP2-204ENST00000474962 IRF2BPLQ9H1B7 796 aa12.83□□□□□ -0.36
CLIP2-204ENST00000474962 IKZF4Q9H2S9 585 aa12.83□□□□□ -0.36
CLIP2-204ENST00000474962 CYP4F11Q9HBI6 524 aa12.83□□□□□ -0.36
CLIP2-204ENST00000474962 UBE4BO95155 1302 aa12.83□□□□□ -0.36
CLIP2-204ENST00000474962 RIF1Q5UIP0 2472 aaKnown RBP12.82□□□□□ -0.36
CLIP2-204ENST00000474962 ARHGEF37A1IGU5 675 aa12.82□□□□□ -0.36
CLIP2-204ENST00000474962 TISP43B9A030 160 aa12.82□□□□□ -0.36
CLIP2-204ENST00000474962 NRG2O14511 850 aaPredicted RBP12.82□□□□□ -0.36
CLIP2-204ENST00000474962 PPEF2O14830 753 aa12.82□□□□□ -0.36
CLIP2-204ENST00000474962 OGTO15294 1046 aa12.82□□□□□ -0.36
CLIP2-204ENST00000474962 PIGRP01833 764 aa12.82□□□□□ -0.36
CLIP2-204ENST00000474962 RHOP08100 348 aa12.82□□□□□ -0.36
CLIP2-204ENST00000474962 POU2F2P09086 479 aa12.82□□□□□ -0.36
CLIP2-204ENST00000474962 PTPN2P17706 415 aa12.82□□□□□ -0.36
CLIP2-204ENST00000474962 LRPAP1P30533 357 aa12.82□□□□□ -0.36
CLIP2-204ENST00000474962 ACOT2P49753 483 aa12.82□□□□□ -0.36
CLIP2-204ENST00000474962 ADCY1Q08828 1119 aa12.82□□□□□ -0.36
CLIP2-204ENST00000474962 STK4Q13043 487 aa12.82□□□□□ -0.36
CLIP2-204ENST00000474962 SKOR2Q2VWA4 1001 aaPredicted RBP12.82□□□□□ -0.36
CLIP2-204ENST00000474962 RNF19BQ6ZMZ0 732 aa12.82□□□□□ -0.36
CLIP2-204ENST00000474962 HS2ST1Q7LGA3 356 aa12.82□□□□□ -0.36
CLIP2-204ENST00000474962 MAP4K3Q8IVH8 894 aa12.82□□□□□ -0.36
CLIP2-204ENST00000474962 NPAS3Q8IXF0 933 aa12.82□□□□□ -0.36
CLIP2-204ENST00000474962 NELFCDQ8IXH7 590 aa12.82□□□□□ -0.36
CLIP2-204ENST00000474962 TCEAL8Q8IYN2 117 aa12.82□□□□□ -0.36
CLIP2-204ENST00000474962 DTWD2Q8NBA8 298 aa12.82□□□□□ -0.36
CLIP2-204ENST00000474962 APPL2Q8NEU8 664 aa12.82□□□□□ -0.36
CLIP2-204ENST00000474962 KCNN1Q92952 543 aa12.82□□□□□ -0.36
CLIP2-204ENST00000474962 TCEAL4Q96EI5 215 aa12.82□□□□□ -0.36
CLIP2-204ENST00000474962 KXD1Q9BQD3 176 aa12.82□□□□□ -0.36
CLIP2-204ENST00000474962 RTP3Q9BQQ7 232 aa12.82□□□□□ -0.36
CLIP2-204ENST00000474962 CORO1BQ9BR76 489 aa12.82□□□□□ -0.36
CLIP2-204ENST00000474962 MSTO1Q9BUK6 570 aa12.82□□□□□ -0.36
CLIP2-204ENST00000474962 PLA2G2FQ9BZM2 168 aa12.82□□□□□ -0.36
CLIP2-204ENST00000474962 RPF1Q9H9Y2 349 aaKnown RBP12.82□□□□□ -0.36
CLIP2-204ENST00000474962 TBC1D17Q9HA65 648 aa12.82□□□□□ -0.36
CLIP2-204ENST00000474962 SLC2A4RGQ9NR83 387 aa12.82□□□□□ -0.36
CLIP2-204ENST00000474962 PCDHB8Q9UN66 801 aa12.82□□□□□ -0.36
CLIP2-204ENST00000474962 MRPS23Q9Y3D9 190 aaKnown RBP12.82□□□□□ -0.36
CLIP2-204ENST00000474962 CITO14578 2027 aa12.81□□□□□ -0.36
CLIP2-204ENST00000474962 M0QZQ0 153 aa12.81□□□□□ -0.36
CLIP2-204ENST00000474962 TULP1O00294 542 aaPredicted RBP12.81□□□□□ -0.36
CLIP2-204ENST00000474962 BIN1O00499 593 aa12.81□□□□□ -0.36
CLIP2-204ENST00000474962 OAZ2O95190 189 aa12.81□□□□□ -0.36
CLIP2-204ENST00000474962 LRG1P02750 347 aa12.81□□□□□ -0.36
CLIP2-204ENST00000474962 ADRB2P07550 413 aa12.81□□□□□ -0.36
CLIP2-204ENST00000474962 DCNP07585 359 aaKnown RBP12.81□□□□□ -0.36
CLIP2-204ENST00000474962 OR4Q2P0C623 313 aa12.81□□□□□ -0.36
CLIP2-204ENST00000474962 CASP5P51878 434 aa12.81□□□□□ -0.36
CLIP2-204ENST00000474962 PPP2R3AQ06190 1150 aa12.81□□□□□ -0.36
CLIP2-204ENST00000474962 EHHADHQ08426 723 aa12.81□□□□□ -0.36
CLIP2-204ENST00000474962 ZNF658Q5TYW1 1059 aaPredicted RBP12.81□□□□□ -0.36
CLIP2-204ENST00000474962 TPGS2Q68CL5 300 aa12.81□□□□□ -0.36
CLIP2-204ENST00000474962 ISM2Q6H9L7 571 aa12.81□□□□□ -0.36
CLIP2-204ENST00000474962 CCDC105Q8IYK2 499 aa12.81□□□□□ -0.36
CLIP2-204ENST00000474962 HS6ST3Q8IZP7 471 aa12.81□□□□□ -0.36
CLIP2-204ENST00000474962 ZNF507Q8TCN5 953 aa12.81□□□□□ -0.36
CLIP2-204ENST00000474962 POMGNT1Q8WZA1 660 aa12.81□□□□□ -0.36
CLIP2-204ENST00000474962 KIAA1468Q9P260 1216 aa12.81□□□□□ -0.36
CLIP2-204ENST00000474962 CPSF3Q9UKF6 684 aaKnown RBP12.81□□□□□ -0.36
CLIP2-204ENST00000474962 SPTLC1O15269 473 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 GFRA3O60609 400 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 LRRN2O75325 713 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 PPP1R37O75864 691 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 VNN2O95498 520 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 CEBPBP17676 345 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 CYP3A5P20815 502 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 RFX1P22670 979 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 PPP1R2P41236 205 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 CCR2P41597 374 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 CDR1P51861 262 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 LILRA4P59901 499 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 SNRPFP62306 86 aaKnown RBP12.8□□□□□ -0.36
CLIP2-204ENST00000474962 KCNA1Q09470 495 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 ANGPT1Q15389 498 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms