RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 STOML1Q9UBI4 398 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 IPO11Q9UI26 975 aaKnown RBP4.35□□□□□ -1.71
USP16-205ENST00000474835 CROTQ9UKG9 612 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 PHTF1Q9UMS5 762 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 SORCS3Q9UPU3 1222 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 NAALADL1Q9UQQ1 740 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 VWA7Q9Y334 891 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 PCDHAC2Q9Y5I4 1007 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 MN1Q10571 1320 aaPredicted RBP4.35□□□□□ -1.71
USP16-205ENST00000474835 hCG_1984214I3L0E3 225 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 DCTN3O75935 186 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 FUT4P22083 530 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 RFX1P22670 979 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 TGM1P22735 817 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 STX2P32856 288 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 C19orf57Q0VDD7 668 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 NR1H3Q13133 447 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 GTF2IRD2BQ6EKJ0 949 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 B3GNT6Q6ZMB0 384 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 ARHGEF18Q6ZSZ5 1173 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 GTF2IRD2Q86UP8 949 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 SATL1Q86VE3 508 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 SPATA24Q86W54 205 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 DGKHQ86XP1 1220 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 ZNF713Q8N859 430 aaPredicted RBP4.35□□□□□ -1.71
USP16-205ENST00000474835 SLC17A8Q8NDX2 589 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 SPOCK2Q92563 424 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 RTP4Q96DX8 246 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 NGLY1Q96IV0 654 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 ZNF594Q96JF6 807 aaPredicted RBP4.35□□□□□ -1.71
USP16-205ENST00000474835 NUDCD1Q96RS6 583 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 SRPK1Q96SB4 655 aaKnown RBP4.35□□□□□ -1.71
USP16-205ENST00000474835 NOC4LQ9BVI4 516 aaKnown RBP4.35□□□□□ -1.71
USP16-205ENST00000474835 MAN1C1Q9NR34 630 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 OLFML3Q9NRN5 406 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 OLAHQ9NV23 265 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 DUS2Q9NX74 493 aaKnown RBP4.35□□□□□ -1.71
USP16-205ENST00000474835 BTBD7Q9P203 1132 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 SLAIN2Q9P270 581 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 MAGEC2Q9UBF1 373 aaPredicted RBP4.35□□□□□ -1.71
USP16-205ENST00000474835 SLC24A2Q9UI40 661 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 RASAL2Q9UJF2 1139 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 SCN9AQ15858 1988 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.35□□□□□ -1.71
USP16-205ENST00000474835 WTIPA6NIX2 430 aaPredicted RBP4.35□□□□□ -1.71
USP16-205ENST00000474835 MIF4GDA9UHW6 222 aaKnown RBP4.35□□□□□ -1.71
USP16-205ENST00000474835 RNF103O00237 685 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 BUB1O43683 1085 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 TBC1D12O60347 775 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 SMIM24O75264 130 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 FKBP6O75344 327 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 SETSIPP0DME0 302 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 UNGP13051 313 aaPredicted RBP4.35□□□□□ -1.71
USP16-205ENST00000474835 PTPN1P18031 435 aaKnown RBP4.35□□□□□ -1.71
USP16-205ENST00000474835 ARRB2P32121 409 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 PAFAH1B1P43034 410 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 MARCKSL1P49006 195 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 MRPL19P49406 292 aaKnown RBP4.35□□□□□ -1.71
USP16-205ENST00000474835 VPS41P49754 854 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 ARFIP2P53365 341 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 POLR2FP61218 127 aaKnown RBP4.35□□□□□ -1.71
USP16-205ENST00000474835 HAND2P61296 217 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 MRPS5P82675 430 aaKnown RBP4.35□□□□□ -1.71
USP16-205ENST00000474835 FBLN2P98095 1184 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 PDE1BQ01064 536 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 CDC20Q12834 499 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 TRMT5Q32P41 509 aaKnown RBP4.35□□□□□ -1.71
USP16-205ENST00000474835 GNPTABQ3T906 1256 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 SLC9C1Q4G0N8 1177 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 RNASEH2BQ5TBB1 312 aaKnown RBP4.35□□□□□ -1.71
USP16-205ENST00000474835 NANOGP8Q6NSW7 305 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 RAB11FIP4Q86YS3 637 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 SCUBE1Q8IWY4 988 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 BLIDQ8IZY5 108 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 ATP6V0D2Q8N8Y2 350 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 KRT35Q92764 455 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 MARVELD3Q96A59 401 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 LRRC59Q96AG4 307 aaKnown RBP4.35□□□□□ -1.71
USP16-205ENST00000474835 NLRP3Q96P20 1036 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 MKNK1Q9BUB5 465 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 C20orf27Q9GZN8 174 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 STN1Q9H668 368 aaKnown RBP4.35□□□□□ -1.71
USP16-205ENST00000474835 OSGEPQ9NPF4 335 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 SLC12A7Q9Y666 1083 aa4.35□□□□□ -1.71
USP16-205ENST00000474835 PTPRDP23468 1912 aa4.34□□□□□ -1.71
USP16-205ENST00000474835 ACOX3O15254 700 aa4.34□□□□□ -1.71
USP16-205ENST00000474835 TM9SF1O15321 606 aa4.34□□□□□ -1.71
USP16-205ENST00000474835 SPATA31C1P0DKV0 1188 aa4.34□□□□□ -1.71
USP16-205ENST00000474835 VDRP11473 427 aa4.34□□□□□ -1.71
USP16-205ENST00000474835 GZMAP12544 262 aa4.34□□□□□ -1.71
USP16-205ENST00000474835 KCNA3P22001 575 aa4.34□□□□□ -1.71
USP16-205ENST00000474835 MAN1A1P33908 653 aa4.34□□□□□ -1.71
USP16-205ENST00000474835 MTTPP55157 894 aa4.34□□□□□ -1.71
USP16-205ENST00000474835 NOP14P78316 857 aaKnown RBP4.34□□□□□ -1.71
USP16-205ENST00000474835 COASYQ13057 564 aa4.34□□□□□ -1.71
USP16-205ENST00000474835 RPS6KA1Q15418 735 aa4.34□□□□□ -1.71
USP16-205ENST00000474835 LRRC23Q53EV4 343 aaPredicted RBP4.34□□□□□ -1.71
USP16-205ENST00000474835 PPP1R18Q6NYC8 613 aa4.34□□□□□ -1.71
USP16-205ENST00000474835 ZNF530Q6P9A1 599 aaPredicted RBP4.34□□□□□ -1.71
USP16-205ENST00000474835 SLC2A7Q6PXP3 512 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms