RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 CEP63Q96MT8 703 aa7.55□□□□□ -1.2
LIMD1-204ENST00000474665 TSPAN18Q96SJ8 248 aa7.55□□□□□ -1.2
LIMD1-204ENST00000474665 CGRRF1Q99675 332 aa7.55□□□□□ -1.2
LIMD1-204ENST00000474665 MKNK1Q9BUB5 465 aa7.55□□□□□ -1.2
LIMD1-204ENST00000474665 SRRTQ9BXP5 876 aaKnown RBP7.55□□□□□ -1.2
LIMD1-204ENST00000474665 XYLT2Q9H1B5 865 aa7.55□□□□□ -1.2
LIMD1-204ENST00000474665 SAMSN1Q9NSI8 373 aaKnown RBP7.55□□□□□ -1.2
LIMD1-204ENST00000474665 SLC38A7Q9NVC3 462 aa7.55□□□□□ -1.2
LIMD1-204ENST00000474665 DPP3Q9NY33 737 aa7.55□□□□□ -1.2
LIMD1-204ENST00000474665 SPG21Q9NZD8 308 aa7.55□□□□□ -1.2
LIMD1-204ENST00000474665 UBQLN1Q9UMX0 589 aaKnown RBP7.55□□□□□ -1.2
LIMD1-204ENST00000474665 FRMD4BQ9Y2L6 1034 aa7.55□□□□□ -1.2
LIMD1-204ENST00000474665 FAN1Q9Y2M0 1017 aa7.55□□□□□ -1.2
LIMD1-204ENST00000474665 MTCL1Q9Y4B5 1905 aaKnown RBP7.54□□□□□ -1.2
LIMD1-204ENST00000474665 WDR87Q6ZQQ6 2873 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 DCDC2BA2VCK2 349 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 FSCN2O14926 492 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 SLC16A3O15427 465 aaKnown RBP7.54□□□□□ -1.2
LIMD1-204ENST00000474665 B3GAT3O94766 335 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 ZNF18P17022 549 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 POLR2BP30876 1174 aaKnown RBP7.54□□□□□ -1.2
LIMD1-204ENST00000474665 GCLMP48507 274 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 VAMP7P51809 220 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 MARSP56192 900 aaKnown RBP7.54□□□□□ -1.2
LIMD1-204ENST00000474665 LILRA4P59901 499 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 ENPEPQ07075 957 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 BFSP1Q12934 665 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 ADAM15Q13444 863 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 IQCB1Q15051 598 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 ZACNQ401N2 412 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 CT47A1Q5JQC4 288 aaPredicted RBP7.54□□□□□ -1.2
LIMD1-204ENST00000474665 SPOUT1Q5T280 376 aaKnown RBP7.54□□□□□ -1.2
LIMD1-204ENST00000474665 CDKAL1Q5VV42 579 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 KIAA0319Q5VV43 1072 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 ASTLQ6HA08 431 aaPredicted RBP7.54□□□□□ -1.2
LIMD1-204ENST00000474665 DCLRE1AQ6PJP8 1040 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 SASS6Q6UVJ0 657 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 INTS8Q75QN2 995 aaKnown RBP7.54□□□□□ -1.2
LIMD1-204ENST00000474665 SV2AQ7L0J3 742 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 APTXQ7Z2E3 356 aaKnown RBP7.54□□□□□ -1.2
LIMD1-204ENST00000474665 TRAPPC11Q7Z392 1133 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 LIMS2Q7Z4I7 341 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 DDX53Q86TM3 631 aaKnown RBP7.54□□□□□ -1.2
LIMD1-204ENST00000474665 NT5DC4Q86YG4 428 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 TRIM59Q8IWR1 403 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 DHX40Q8IX18 779 aaKnown RBP7.54□□□□□ -1.2
LIMD1-204ENST00000474665 ENOX1Q8TC92 643 aaKnown RBP7.54□□□□□ -1.2
LIMD1-204ENST00000474665 AUTS2Q8WXX7 1259 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 SEMA4DQ92854 862 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 SYAP1Q96A49 352 aaPredicted RBP7.54□□□□□ -1.2
LIMD1-204ENST00000474665 DDX27Q96GQ7 796 aaKnown RBP7.54□□□□□ -1.2
LIMD1-204ENST00000474665 MSLNLQ96KJ4 702 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 SAMD11Q96NU1 681 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 FAM193BQ96PV7 902 aaPredicted RBP7.54□□□□□ -1.2
LIMD1-204ENST00000474665 TSG101Q99816 390 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 C11orf84Q9BUA3 381 aaPredicted RBP7.54□□□□□ -1.2
LIMD1-204ENST00000474665 CHST7Q9NS84 486 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 ANO10Q9NW15 660 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 ADAM28Q9UKQ2 775 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 RWDD3Q9Y3V2 267 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 PCDHB12Q9Y5F1 795 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 R4GN57 208 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 CEP250Q9BV73 2442 aa7.54□□□□□ -1.2
LIMD1-204ENST00000474665 FAM208BQ5VWN6 2430 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 HIDE1A8MVS5 230 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 M0QZQ0 153 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 IKBKBO14920 756 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 ADAM12O43184 909 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 ITGB3P05106 788 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 ADRB1P08588 477 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 CCDC192P0DO97 292 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 EPB41P11171 864 aaKnown RBP7.53□□□□□ -1.2
LIMD1-204ENST00000474665 TNNI1P19237 187 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 FGFR3P22607 806 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 PPM1AP35813 382 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 NDUFV1P49821 464 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 MYL6P60660 151 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 ANGPT1Q15389 498 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 SURF1Q15526 300 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 DUOXA2Q1HG44 320 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 CBWD6Q4V339 395 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 HSP90AA4PQ58FG1 418 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 CBWD3Q5JTY5 395 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 MIIPQ5JXC2 388 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 RTP2Q5QGT7 225 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 CBWD5Q5RIA9 395 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 DPY19L2P1Q6NXN4 242 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 FUT10Q6P4F1 479 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 RSPO2Q6UXX9 243 aaPredicted RBP7.53□□□□□ -1.2
LIMD1-204ENST00000474665 VPS52Q8N1B4 723 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 BEST2Q8NFU1 509 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 LMO3Q8TAP4 145 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 TAS1R2Q8TE23 839 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 POF1BQ8WVV4 589 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 TMEM169Q96HH4 297 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 SUSD3Q96L08 255 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 UROC1Q96N76 676 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 COLEC11Q9BWP8 271 aa7.53□□□□□ -1.2
LIMD1-204ENST00000474665 PHF7Q9BWX1 381 aaPredicted RBP7.53□□□□□ -1.2
LIMD1-204ENST00000474665 ZBP1Q9H171 429 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms